Posts Tagged 'modeling'

An alternative to static climatologies: robust estimation of open ocean CO2 variables and nutrient concentrations from T, S, and O2 data using Bayesian neural networks

This work presents two new methods to estimate oceanic alkalinity (AT), dissolved inorganic carbon (CT), pH, and pCO2 from temperature, salinity, oxygen, and geolocation data. “CANYON-B” is a Bayesian neural network mapping that accurately reproduces GLODAPv2 bottle data and the biogeochemical relations contained therein. “CONTENT” combines and refines the four carbonate system variables to be consistent with carbonate chemistry. Both methods come with a robust uncertainty estimate that incorporates information from the local conditions. They are validated against independent GO-SHIP bottle and sensor data, and compare favorably to other state-of-the-art mapping methods. As “dynamic climatologies” they show comparable performance to classical climatologies on large scales but a much better representation on smaller scales (40–120 d, 500–1,500 km) compared to in situ data. The limits of these mappings are explored with pCO2 estimation in surface waters, i.e., at the edge of the domain with high intrinsic variability. In highly productive areas, there is a tendency for pCO2 overestimation due to decoupling of the O2 and C cycles by air-sea gas exchange, but global surface pCO2 estimates are unbiased compared to a monthly climatology. CANYON-B and CONTENT are highly useful as transfer functions between components of the ocean observing system (GO-SHIP repeat hydrography, BGC-Argo, underway observations) and permit the synergistic use of these highly complementary systems, both in spatial/temporal coverage and number of observations. Through easily and robotically-accessible observations they allow densification of more difficult-to-observe variables (e.g., 15 times denser AT and CT compared to direct measurements). At the same time, they give access to the complete carbonate system. This potential is demonstrated by an observation-based global analysis of the Revelle buffer factor, which shows a significant, high latitude-intensified increase between +0.1 and +0.4 units per decade. This shows the utility that such transfer functions with realistic uncertainty estimates provide to ocean biogeochemistry and global climate change research. In addition, CANYON-B provides robust and accurate estimates of nitrate, phosphate, and silicate. Matlab and R code are available at

Continue reading ‘An alternative to static climatologies: robust estimation of open ocean CO2 variables and nutrient concentrations from T, S, and O2 data using Bayesian neural networks’

A strategy for the conservation of biodiversity on mid-ocean ridges from deep-sea mining

Mineral exploitation has spread from land to shallow coastal waters and is now planned for the offshore, deep seabed. Large seafloor areas are being approved for exploration for seafloor mineral deposits, creating an urgent need for regional environmental management plans. Networks of areas where mining and mining impacts are prohibited are key elements of these plans. We adapt marine reserve design principles to the distinctive biophysical environment of mid-ocean ridges, offer a framework for design and evaluation of these networks to support conservation of benthic ecosystems on mid-ocean ridges, and introduce projected climate-induced changes in the deep sea to the evaluation of reserve design. We enumerate a suite of metrics to measure network performance against conservation targets and network design criteria promulgated by the Convention on Biological Diversity. We apply these metrics to network scenarios on the northern and equatorial Mid-Atlantic Ridge, where contractors are exploring for seafloor massive sulfide (SMS) deposits. A latitudinally distributed network of areas performs well at (i) capturing ecologically important areas and 30 to 50% of the spreading ridge areas, (ii) replicating representative areas, (iii) maintaining along-ridge population connectivity, and (iv) protecting areas potentially less affected by climate-related changes. Critically, the network design is adaptive, allowing for refinement based on new knowledge and the location of mining sites, provided that design principles and conservation targets are maintained. This framework can be applied along the global mid-ocean ridge system as a precautionary measure to protect biodiversity and ecosystem function from impacts of SMS mining.

Continue reading ‘A strategy for the conservation of biodiversity on mid-ocean ridges from deep-sea mining’

Projected amplification of food web bioaccumulation of MeHg and PCBs under climate change in the Northeastern Pacific

Climate change increases exposure and bioaccumulation of pollutants in marine organisms, posing substantial ecophysiological and ecotoxicological risks. Here, we applied a trophodynamic ecosystem model to examine the bioaccumulation of organic mercury (MeHg) and polychlorinated biphenyls (PCBs) in a Northeastern Pacific marine food web under climate change. We found largely heterogeneous sensitivity in climate-pollution impacts between chemicals and trophic groups. Concentration of MeHg and PCBs in top predators, including resident killer whales, is projected to be amplified by 8 and 3%, respectively, by 2100 under a high carbon emission scenario (Representative Concentration Pathway 8.5) relative to a no-climate change control scenario. However, the level of amplification increases with higher carbon emission scenario for MeHg, but decreases for PCBs. Such idiosyncratic responses are shaped by the differences in bioaccumulation pathways between MeHg and PCBs, and the modifications of food web dynamics between different levels of climate change. Climate-induced pollutant amplification in mid-trophic level predators (Chinook salmon) are projected to be higher (~10%) than killer whales. Overall, the predicted trophic magnification factor is ten-fold higher in MeHg than in PCBs under high CO2 emissions. This contribution highlights the importance of understanding the interactions with anthropogenic organic pollutants in assessing climate risks on marine ecosystems.

Continue reading ‘Projected amplification of food web bioaccumulation of MeHg and PCBs under climate change in the Northeastern Pacific’

Global change in marine aquaculture production potential under climate change

Climate change is an immediate and future threat to food security globally. The consequences for fisheries and agriculture production potential are well studied, yet the possible outcomes for aquaculture (that is, aquatic farming)—one of the fastest growing food sectors on the planet—remain a major gap in scientific understanding. With over one-third of aquaculture produced in marine waters and this proportion increasing, it is critical to anticipate new opportunities and challenges in marine production under climate change. Here, we model and map the effect of warming ocean conditions (Representative Concentration Pathway scenario 8.5) on marine aquaculture production potential over the next century, based on thermal tolerance and growth data of 180 cultured finfish and bivalve species. We find heterogeneous patterns of gains and losses, but an overall greater probability of declines worldwide. Accounting for multiple drivers of species growth, including shifts in temperature, chlorophyll and ocean acidification, reveals potentially greater declines in bivalve aquaculture compared with finfish production. This study addresses a missing component in food security research and sustainable development planning by identifying regions that will face potentially greater climate change challenges and resilience with regards to marine aquaculture in the coming decades. Understanding the scale and magnitude of future increases and reductions in aquaculture potential is critical for designing effective and efficient use and protection of the oceans, and ultimately for feeding the planet sustainably.

Continue reading ‘Global change in marine aquaculture production potential under climate change’

Strategies in times of crisis—insights into the benthic foraminiferal record of the Palaeocene–Eocene Thermal Maximum

Climate change is predicted to alter temperature, carbonate chemistry and oxygen availability in the oceans, which will affect individuals, populations and ecosystems. We use the fossil record of benthic foraminifers to assess developmental impacts in response to environmental changes during the Palaeocene–Eocene Thermal Maximum (PETM). Using an unprecedented number of µ-computed tomography scans, we determine the size of the proloculus (first chamber), the number of chambers and the final size of two benthic foraminiferal species which survived the extinction at sites 690 (Atlantic sector, Southern Ocean, palaeodepth 1900 m), 1210 (central equatorial Pacific, palaeodepth 2100 m) and 1135 (Indian Ocean sector, Southern Ocean, palaeodepth 600–1000 m). The population at the shallowest site, 1135, does not show a clear response to the PETM, whereas those at the other sites record reductions in diameter or proloculus size. Temperature was similar at all sites, thus it is not likely to be the reason for differences between sites. At site 1210, small size coincided with higher chamber numbers during the peak event, and may have been caused by a combination of low carbonate ion concentrations and low food supply. Dwarfing at site 690 occurred at lower chamber numbers, and may have been caused by decreasing carbonate saturation at sufficient food levels to reproduce. Proloculus size varied strongly between sites and through time, suggesting a large influence of environment on both microspheric and megalospheric forms without clear bimodality. The effect of the environmental changes during the PETM was more pronounced at deeper sites, possibly implicating carbonate saturation.

Continue reading ‘Strategies in times of crisis—insights into the benthic foraminiferal record of the Palaeocene–Eocene Thermal Maximum’

Drivers of future seasonal cycle changes in oceanic pCO2

Recent observation-based results show that the seasonal amplitude of surface ocean partial pressure of CO2 (pCO2) has been increasing on average at a rate of 2–3µatm per decade (Landschützer et al. 2018). Future increases in pCO2 seasonality are expected, as marine CO2 concentration ([CO2]) will increase in response to increasing anthropogenic carbon emissions (McNeil and Sasse 2016). Here we use seven different global coupled atmosphere–ocean–carbon cycle–ecosystem model simulations conducted as part of the Coupled Model Intercomparison Project Phase 5 (CMIP5) to study future projections of the pCO2 annual cycle amplitude and to elucidate the causes of its amplification. We find that for the RCP8.5 emission scenario the seasonal amplitude (climatological maximum minus minimum) of upper ocean pCO2 will increase by a factor of 1.5 to 3 over the next 60–80 years. To understand the drivers and mechanisms that control the pCO2 seasonal amplification we develop a complete analytical Taylor expansion of pCO2 seasonality in terms of its four drivers: dissolved inorganic carbon (DIC), total alkalinity (TA), temperature (T), and salinity (S). Using this linear approximation we show that the DIC and T terms are the dominant contributors to the total change in pCO2 seasonality. To first order, their future intensification can be traced back to a doubling of the annual mean pCO2, which enhances DIC and alters the ocean carbonate chemistry. Regional differences in the projected seasonal cycle amplitude are generated by spatially varying sensitivity terms. The subtropical and equatorial regions (40°S–40°N) will experience a  ≈ 30–80µatm increase in seasonal cycle amplitude almost exclusively due to a larger background CO2 concentration that amplifies the T seasonal effect on solubility. This mechanism is further reinforced by an overall increase in the seasonal cycle of T as a result of stronger ocean stratification and a projected shoaling of mean mixed layer depths. The Southern Ocean will experience a seasonal cycle amplification of  ≈ 90–120µatm in response to the mean pCO2-driven change in the mean DIC contribution and to a lesser extent to the T contribution. However, a decrease in the DIC seasonal cycle amplitude somewhat counteracts this regional amplification mechanism.

Continue reading ‘Drivers of future seasonal cycle changes in oceanic pCO2’

Opportunities for climate‐risk reduction through effective fisheries management

Risk of impact of marine fishes to fishing and climate change (including ocean acidification) depend on the species’ ecological and biological characteristics, as well as their exposure to over‐exploitation and climate hazards. These human‐induced hazards should be considered concurrently in conservation risk assessment. In this study, we aim to examine the combined contributions of climate change and fishing to the risk of impacts of exploited fishes, and the scope for climate‐risk reduction from fisheries management. We combine fuzzy logic expert system with species distribution modeling to assess the extinction risks of climate and fishing impacts of 825 exploited marine fish species across the global ocean. We compare our calculated risk index with extinction risk of marine species assessed by the International Union for Conservation of Nature (IUCN). Our results show that 60% (499 species) of the assessed species are projected to experience very high risk from both overfishing and climate change under a “business‐as‐usual” scenario (RCP 8.5 with current status of fisheries) by 2050. The risk index is significantly and positively related to level of IUCN extinction risk (ordinal logistic regression, p < 0.0001). Furthermore, the regression model predicts species with very high risk index would have at least one in five (>20%) chance of having high extinction risk in the next few decades (equivalent to the IUCN categories of vulnerable, endangered or critically endangered). Areas with more at‐risk species to climate change are in tropical and subtropical oceans, while those that are at risk to fishing are distributed more broadly, with higher concentration of at‐risk species in North Atlantic and South Pacific Ocean. The number of species with high extinction risk would decrease by 63% under the sustainable fisheries‐low emission scenario relative to the “business‐as‐usual” scenario. This study highlights the substantial opportunities for climate‐risk reduction through effective fisheries management.

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Ocean acidification in the IPCC AR5 WG II

OUP book