The ocean is absorbing approximately one third of the anthropogenic carbon dioxide (CO₂) emissions to the atmosphere. As a result, the pH of the ocean is declining steadily, a phenomenon known as ocean acidification (OA). This decline in pH and the associated reductions in calcium carbonate saturation states of the water can have widespread consequences for marine life, particularly to calcifying organisms. In this thesis, I aim to understand the effects of OA on the growth, shell integrity, and susceptibility to secondary stressors like heatwaves or predation, of two important shellfish species in British Columbia, Pacific oysters (Magallana gigas) and bay mussels (Mytilus spp.). I also aim to identify potential tipping points beyond which the biological responses of these shellfish to OA rapidly become more pronounced. I reared oysters and mussels in experimental mesocosms, in four pCO₂ treatments for eight-weeks to determine growth. I subsequently exposed these OA-acclimated animals to a secondary stressor by simulating heatwave conditions to assess thermal tolerance, and by introducing a predatory sea star to assess vulnerability to predation. Finally, shell condition was visually assessed, and shells were mechanically crushed to determine integrity. I found that OA decreased the growth of both oysters and mussels. No tipping point was observed for oyster growth, but reduced growth only emerged at the highest levels of OA in mussels. Sensitivity to atmospheric warming was not increased after exposure to acidic conditions for either species, although oysters had a considerably higher thermal tolerance than mussels. Mussel vulnerability to predation did increase, although the relationship was complex and depended on predator size. OA negatively affected shell strength, and possible tipping points emerged for this response metric in both species. Overall, OA was shown to negatively affect both species, but patterns of effect and the presence of potential tipping points depended on the species and the response metric. Understanding how these ecologically and commercially important bivalves are responding to OA is important for understanding how changing ocean chemistry will affect marine ecosystems, and to inform aquaculture managers on mitigation strategies.
Continue reading ‘Effects of ocean acidification on the growth, shell integrity, and vulnerability to thermal stress and predation in Pacific oysters (Magallana gigas), and bay mussels (Mytilus spp.)’Posts Tagged 'laboratory'
Effects of ocean acidification on the growth, shell integrity, and vulnerability to thermal stress and predation in Pacific oysters (Magallana gigas), and bay mussels (Mytilus spp.)
Published 17 April 2026 Science Leave a CommentTags: biological response, laboratory, mesocosms, mollusks, morphology, mortality, multiple factors, North Pacific, predation, temperature
Effects of pH on phytoplankton growth and diversity in a tropical coastal bay: an experimental study
Published 14 April 2026 Science Leave a CommentTags: biological response, BRcommunity, community composition, growth, Indian, laboratory, otherprocess, phytoplankton
This research was intended to investigate the effects of reduced pH on the growth rates and diversity of phytoplankton in the coastal waters of Visakhapatnam in the Bay of Bengal. A short-term (six days) microcosm experiment was conducted with different pH conditions such as ambient (control-in situ pH), pH 8.0 (0.2 pH units drop from in situ pH) and pH 7.8 (0.4 pH units drop from in situ pH) corresponding to low, medium, and high future pH decline scenarios, respectively, to study the direct acidification impact on phytoplankton. The results revealed that the phytoplankton communities exhibit a wide range of responses including changes in growth rate during incubation. From the two treatments, a more pronounced response was observed in pH 7.8 conditions compared to the present pH scenario. Some phytoplankton communities exhibited positive growth responses to acidification, while others showed negative reactions in terms of biodiversity. Notably, Pseudo-nitzschia sp. became dominant during acidification, whereas larger centric diatoms such as Skeletonema spp., Chaetoceros spp., Rhizosolenia sp., Dactyliosolen fragilissimus, and Ditylum brightwellii showed no significant growth response to upcoming acidified conditions. This indicates a diverse array of physiological tolerance among the plankton species to environmental shifts. This study recommends further research to explore the impact of ocean acidification on other planktonic species in the coastal waters of Bay of Bengal.
Continue reading ‘Effects of pH on phytoplankton growth and diversity in a tropical coastal bay: an experimental study’Coexpression among eastern oyster host and microbiome genes suggests coordinated regulation of calcifying fluid chemistry
Published 13 April 2026 Science Leave a CommentTags: biological response, BRcommunity, laboratory, molecular biology, mollusks, North Atlantic, physiology, prokaryotes
Significance
Oysters and many marine animals build shells by controlling the chemistry of extracellular fluids where minerals form, yet whether microbes in these fluids influence calcification remains unclear. We show that oysters maintain favorable conditions for mineral formation by regulating the carbonate chemistry of the shell-forming fluid, and that resident microbes respond to these changes by expressing nitrogen- and sulfur-cycling genes capable of altering pH, alkalinity, and carbonate availability. Many of these microbial transcripts were tightly correlated with oyster immune and signaling genes, suggesting that host and microbiome processes may be linked within the calcifying environment. These findings point to a host–microbiome interaction in the regulation of calcifying-fluid chemistry that directly links microbial activity to the carbonate chemistry underlying biomineralization.
Abstract
Marine animals that build shells, such as oysters, carefully regulate the chemistry of their internal calcifying fluids, but the molecular mechanisms behind this control, as well as whether microbes play a role in calcification, are poorly understood. To better understand oysters’ molecular mechanisms and the role of their calcifying-fluid microbes, we conducted experiments that simulated a tidal cycle, measured calcifying fluid pH and total dissolved inorganic carbon, and characterized host and microbial gene expression via transcriptomics. These experiments showed that calcifying fluid pH remained relatively stable throughout tidal pH fluctuations, with corresponding increases in oyster transcripts for ion transport and acid–base regulation. These data provide direct evidence that tidal fluctuations drive rapid changes in oyster calcifying fluid chemistry. Most surprisingly, increases in microbial transcripts related to nitrogen and sulfur cycling correlated to higher calcifying fluid DIC, and coexpression network analysis revealed patterns of gene expression that linked oyster immune and neural pathways to microbial redox processes, providing molecular evidence of potential host modulation of microbial metabolism. Together, these results reveal that oysters actively regulate their calcifying fluid pH over short timescales, and the endemic microbiome metabolic responses can yield metabolites that influence calcifying fluid pH, alkalinity, and ultimately calcification. These data offer a perspective on oyster physiological capacity and, most importantly, the potential role of microbes in oyster calcification. In light of ongoing changes in ocean pH and temperature, oysters provide a model for studying animal–microbial responses to environmental acidification and how their interactions may shape biomineralization.
Continue reading ‘Coexpression among eastern oyster host and microbiome genes suggests coordinated regulation of calcifying fluid chemistry’Intracellular acid-base regulation mediates a trade-off between shell and somatic growth in a clam under ocean acidification
Published 9 April 2026 Science Leave a CommentTags: biological response, growth, individualmodeling, laboratory, mesocosms, modeling, molecular biology, mollusks, North Pacific, physiology
Highlights
- Clams actively regulate intracellular pH against ocean acidification via CAc
- RNAi confirms CAc’s essential role in H+ efflux, measured by in vivo SIET.
- A CAc-sAC-NKA network forms a conserved regulatory pathway for acid-base balance.
- DEB model shows this pH defense sustains shell linear growth despite metabolic costs.
SUMMARY
Ocean acidification (OA) is predicted to threaten marine bivalves, casting them as passive victims of changing carbonate chemistry. Contributing to a revised understanding, we identified a conserved mechanism for acid-base regulation that supports intracellular resilience. Using the Manila clam Ruditapes philippinarum as a model, this study demonstrated that intracellular pH (pHi) homeostasis under elevated pCO2 was maintained through cytosolic carbonic anhydrase (CAc)-mediated H+ efflux. A causal link was established by combining in vivo scanning ion-selective electrode technique (SIET) with RNA interference (RNAi), where RpCAc knockdown suppressed H+ efflux and compromised pHi. A coordinated regulatory network involving CAc, soluble adenylyl cyclase (sAC), and Na+/K+-ATPase (NKA) was synergistically upregulated, suggesting an evolved adaptive pathway. Dynamic Energy Budget (DEB) modeling, calibrated with experimental data, revealed that this cellular compensation carries a high energetic cost, leading to a significant reallocation of resources: shell growth was maintained, but somatic growth was severely suppressed. These results elucidate a conserved cytoprotective mechanism that enables short-term tolerance of OA at a substantial somatic cost, redefining resilience to include energetic trade-offs.
Continue reading ‘Intracellular acid-base regulation mediates a trade-off between shell and somatic growth in a clam under ocean acidification’Climate-driven restructuring of phytoplankton productivity and community composition in the south-eastern Black Sea: insights from seasonal CO2-temperature manipulation experiments
Published 9 April 2026 Science Leave a CommentTags: biological response, Black Sea, community composition, laboratory, multiple factors, otherprocess, physiology, phytoplankton, temperature
Semi-enclosed marine systems with low buffering capacity, such as the Black Sea, are expected to experience amplified impacts of ocean acidification and warming, yet experimental evidence on their combined short-term effects on natural phytoplankton assemblages remains limited. Here, we present a seasonally resolved one-year study (four experiments conducted between 2022 and 2023) based on 48 h short-term microcosm incubation experiments using natural phytoplankton communities collected from coastal and offshore stations in the south-eastern Black Sea. CO2 concentrations (360, 600, and 760 ppm) and temperature (ambient and +3 °C) were manipulated to examine short-term physiological and compositional responses under projected climate scenarios. We hypothesised that CO2 and warming would exert both independent and interactive effects on short-term particulate organic carbon production (14C uptake rates) and relative community composition, with responses varying seasonally and being most pronounced during summer stratification.
Short-term particulate primary production increased by ∼22% and ∼36% at 600 and 760 ppm CO2, respectively (p<0.05), while warming provided an additional 14–22% enhancement depending on season, with significant CO2 × temperature interaction terms detected for total production (two-way ANOVA, p<0.05), indicating synergistic CO2–temperature effects. Warming and moderate CO2 enrichment were associated with increased relative contributions of nano- and picophytoplankton (by ∼6–10%), whereas high CO2 reduced the warming-driven shift toward smaller cells by maintaining microphytoplankton contributions ∼10–15% higher than in the warming-only treatment. Carbonate chemistry responded strongly to CO2 manipulation, with pH declining from in-situ values of 8.09–8.21 to 7.06–7.52 during incubations and minor reductions in total alkalinity, reflecting the weak buffering capacity of the system. Pigment composition and microscopy indicated short-term increases in dinoflagellate relative abundance (∼12–18%) and concurrent declines in diatom markers, accompanied by accelerated nitrate depletion and reduced nitrogen-to-phosphorus (N:P) ratios, consistent with enhanced nitrogen limitation.
Overall, these findings demonstrate pronounced short-term sensitivity of natural phytoplankton assemblages in the south-eastern Black Sea to combined CO2 and warming under controlled incubation conditions. Because these results derive from 48 h microcosm experiments, they represent short-term physiological and compositional responses rather than direct evidence of long-term ecosystem restructuring, yet the observed patterns suggest potential implications for trophic efficiency, harmful algal bloom development, and carbon cycling in this low-buffer, stratified basin under future climate forcing.
Continue reading ‘Climate-driven restructuring of phytoplankton productivity and community composition in the south-eastern Black Sea: insights from seasonal CO2-temperature manipulation experiments’Combined ecotoxicity of microplastics and crude oil co-pollutants: occurrence, distribution and its synergistic impact with ocean acidification on Artemia franciscana
Published 3 April 2026 Science ClosedTags: biological response, crustaceans, Indian, laboratory, multiple factors, physiology, plastics, reproduction, toxicants, zooplankton
Microplastics (MPs) are recognized as a global concern, with specific attention shifted towards marine MPs pollution. This particular study investigates the abundance and distribution of crude oil-loaded microplastics (COMPs) along the Chennai coastline, Tamil Nadu, India and evaluates their combined toxicological effects with ocean acidification on Artemia franciscana. Spatial analysis revealed that Ennore Creek exhibited the highest MP concentration (10.82 ± 0.2 items/L). Polypropylene was recorded as the predominant polymer type followed by low density polyethylene and polyethylene terephthalate, with particle size ranging from 250 to 500 µm. COMPs were detected across all sampling sites, with concentrations declining from Ennore Creek (0.21 ± 0.03 items/L) to Kasimedu Beach (0.10 ± 0.02 items/L). The adsorption of crude oil on MPs is primarily mediated by physical interaction with multi-layer adsorption behaviour. The results highlighted that increase in MP concentration and decrease in seawater pH significantly induced acute toxicity and oxidative stress responses in A. franciscana. At pH 7.8, experimental groups exposed to 0.5 mg/mL of COMPs developed higher ROS, SOD and catalase activity (p<0.001). Whereas control groups alone showed significant increase in oxidative stress responses at lower pH level such as pH 7.8 and 8.0. Combined exposure of COMPs and low pH conditions significantly increased oxidative damages in A. franciscana and affected its hatching ability. The observations from this study emphasize the urgent need for integrated monitoring and further research to explore combined toxicological effects of MPs and ocean acidification to other marine organisms as well.
Continue reading ‘Combined ecotoxicity of microplastics and crude oil co-pollutants: occurrence, distribution and its synergistic impact with ocean acidification on Artemia franciscana’Ocean acidification affects the timing of puberty and the reproductive output in a marine temperate fish
Published 2 April 2026 Science ClosedTags: adaptation, biological response, fish, laboratory, morphology, mortality, North Atlantic, otherprocess, reproduction
Ocean acidification (OA) is a major climate-related threat to fish that can disrupt the regulation of the reproductive axis of fish, impacting reproductive success. However, previous studies have only focused on a single reproductive cycle and reported increased fecundity in some species exposed to OA. Since acclimation over several reproductive cycles can occur, it is necessary to evaluate successive reproductive cycles for predicting the actual resilience of species to OA. In this study we assessed the impact of lifetime exposure to different ocean pH/pCO2 levels (Current condition, Moderate OA and High OA) on the sexual maturation and spawning phenology of the European sea bass, over its two first reproductive periods. We tested the hypothesis that OA would exert its greatest impact at the onset of puberty (first reproduction). Accordingly, High OA exposure induced an earlier onset of puberty in both sexes, resulting in a longer spawning period and an increased fecundity. These effects were reduced during the second reproductive season. However, OA affected egg quality and sperm motility profile during the second reproductive season, leading to a total mortality at hatching of embryos spontaneously produced. This mortality was not observed in embryos produced through hormone-induced oocyte maturation and in vitro fertilisation. These results suggest that OA affects the regulation of oocyte maturation and/or the synchronisation of eggs and sperm release. The OA-driven shift in spawning may misalign with optimal environmental conditions for offspring survival. This increases the population’s vulnerability and could favour species whose reproduction is more resilient to OA.
Continue reading ‘Ocean acidification affects the timing of puberty and the reproductive output in a marine temperate fish’pCO2-induced seawater acidification influencing cadmium toxicity on antioxidant defenses responses in juvenile Manila clam Ruditapes philippinarum
Published 30 March 2026 Science ClosedTags: biological response, laboratory, metals, mollusks, multiple factors, North Pacific, physiology
Highlights
- GSH system and SOD-CAT act as complementary lines of antioxidant defense
- SA alters Cd effects on antioxidants depending on metal concentration
- High SA overrides Cd effects on antioxidant defenses in Manila clams
- Combined high SA and Cd exposure overwhelms antioxidant capacity
- Candidate biomarkers for monitoring SA or Cd stress are proposed
Abstract
Ocean acidification is known to interact with heavy metals, impacting physiological processes of marine organisms. This study investigated antioxidant defenses of juvenile Manila clam Ruditapes philippinarum exposed to cadmium (Cd) across ambient-relevant to high concentrations, under pCO2-induced seawater acidification (SA) scenarios corresponding to IPCC ocean pH projections. Results revealed that clam’s antioxidant system, encompassing GSH defense system and SOD-CAT defense lines, collectively combated oxidative stress dependent on specific stressors and their stress levels. GSH system is vital for detoxification and maintaining redox balance, while SOD and CAT are essential for scavenging ROS. Cd exposure notably activated GSH redox cycle, and SA markedly inhibited the antioxidants associated with this cycle. SOD and CAT exhibited distinct regulatory pathways with asynchronous responses to SA and Cd co-exposure. SA conditions modulate Cd-induced antioxidant response dependent on metal concentrations. Antioxidant biomarkers responded more prominently to SA and Cd interactions than to individual exposure, particularly, high SA effects could override Cd effects on antioxidant responses. Although SA effects did not directly induce lipid peroxidation, elevated MDA levels under Cd exposure occurred only under SA conditions, indicating insufficient antioxidant defense against lipid peroxidation under excess co-exposure. GSH and SOD were more sensitive to SA exposure, whereas MDA and GST were sensitive to Cd exposure, suggesting their potential as biomarkers for assessing SA or Cd-induced oxidative stress, respectively. These findings provide insights into interplay between metal toxicity and ocean acidification on antioxidant defenses in bivalves, shedding light on their strategies to combat metal pollution amidst global ocean change.
Continue reading ‘pCO2-induced seawater acidification influencing cadmium toxicity on antioxidant defenses responses in juvenile Manila clam Ruditapes philippinarum’Metabolic rate measurements of two benthic invertebrates under simulated climate change conditions
Published 30 March 2026 Science ClosedTags: adaptation, biological response, laboratory, Mediterranean, mollusks, morphology, multiple factors, otherprocess, porifera, respiration, temperature
Background
Climate change is profoundly altering marine ecosystems through ocean warming and acidification. These stressors are especially pronounced in the Mediterranean Sea, a climate change hotspot projected to warm faster than the global average. Increased temperatures and reduced pH directly affect metabolic processes in marine invertebrates by elevating respiration rates up to species-specific thermal limits, beyond which physiological performance declines. Ocean acidification further disrupts metabolic processes by increasing energetic maintenance costs. Sessile and sedentary marine invertebrates, such as sponges and benthic gastropods, are particularly exposed to such environmental shifts due to their limited ability to escape unfavorable conditions, making physiological plasticity and local adaptation crucial for persistence.
New information
This manuscript presents a dataset of oxygen consumption rates and wet weight measurements for two low-mobility marine species, the gastropod Hexaplex trunculus and the sponge Chondrilla nucula. Using a common garden experiment, individuals from North and South Aegean populations were exposed for three months to simulated climate change conditions combining increased temperature and reduced pH. The dataset documents respiration measurements obtained using metabolic chambers after three months of exposure, allowing comparisons across species, geographic origin, and experimental treatments.The dataset accounts for intraspecific variation in these responses, providing insight into potential adaptive differences among geographically distinct populations. These data provide a resource for future analyses of metabolic responses of marine invertebrates to combined warming and acidification conditions.
Continue reading ‘Metabolic rate measurements of two benthic invertebrates under simulated climate change conditions’Skeletal growth and loss of the cold-water coral Lophelia pertusa from multiple environmental drivers in a year-long experiment
Published 27 March 2026 Science ClosedTags: biological response, corals, dissolution, growth, laboratory, morphology, mortality, multiple factors, North Atlantic, oxygen, physiology, respiration, temperature
Colony-forming scleractinian cold-water corals (CWCs) are important ecosystem engineers, forming complex 3-dimensional habitats in the deep sea, which in turn sustain high biodiversity. They are threatened by future environmental changes such as ocean acidification, warming, deoxygenation, and food limitation, but little is known about the effect of these drivers in combination or on the long-term. We conducted a year-long aquarium experiment with Lophelia pertusa (syn. Desmophyllum pertusum) under projected end-of-century conditions, investigating the combined effect of differences in pH (8.1 and 7.7), temperature (9°C and 12°C), oxygen concentration (100% and 90%) and food supply (100% and 60%) on coral survival, growth, respiration rates, skeletal dissolution and energetic reserves. Growth rates of L. pertusa decreased significantly in both multiple driver treatments, resulting in negative and more variable growth rates. However, growth rates only started to decrease after 4.5 months, clearly showing a delayed response. In addition, survival rates and energetic reserves were slightly lower in multiple driver treatments, whereas L. pertusa was not affected by reduced oxygen concentration examined as a single factor. Negative growth rates in multiple driver treatments were driven by dissolution of bare skeletal parts due to reduced seawater pH and temporary aragonite undersaturation, visualised here through micro-computed tomography images. While live CWCs may be able to cope with projected future environmental changes over the timescale of 1 year, ocean acidification will lead to dissolution of the dead skeletal framework of CWC reefs and net loss, reducing the complexity and associated biodiversity of these reefs. However, the challenge remains in closing the gap between long-term experiments and the much longer-term chronic exposure of CWCs to projected environmental changes.
Continue reading ‘Skeletal growth and loss of the cold-water coral Lophelia pertusa from multiple environmental drivers in a year-long experiment’Tolerance to future elevated CO2 conditions in sablefish (Anoplopoma fimbria), a deep-water benthic dwelling fish species
Published 26 March 2026 Science ClosedTags: biological response, fish, laboratory, molecular biology, North Pacific, performance, physiology
Numerous studies have found that elevated CO2 levels in marine waters induced significant physiological and behavioral effects in fish. In an earlier study of coho salmon (Oncorhynchus kisutch), we observed that elevated CO2 exposure impaired signaling in the olfactory bulb, through a mechanism likely involving interference of gamma-aminobutyric acid (GABA) signaling. However, the effects of elevated CO2 may be species-specific, and there have been few studies addressing the effects of elevated CO2 on benthic fish. In the current study, we investigated the effects of elevated CO2 exposures on the deep-water benthic species, sablefish (Anoplopoma fimbria). Sablefish were exposed to three different levels of CO2 (700, 1600 and 2700 µatm) for two weeks, followed by behavioral, neurophysiological and gene expression analysis of the olfactory system. Analysis of behaviors mediated by food odors, including swimming activity and food strikes did not differ between fish maintained under elevated or control CO2 conditions. Similarly, electro-olfactogram recordings of odorant signaling did not differ among treatment and controls. mRNA expression patterns of olfactory bulb genes that were altered in coho salmon exposed to elevated CO2 levels, were similarly examined in sablefish. Sablefish mRNAs encoding genes involved in GABA-mediated olfactory bulb signaling were generally unaffected by high CO2, but aldh9a1, an enzyme involved in the synthesis of GABA, was elevated by high CO2. The results of our study contrast other studies demonstrating adverse effects of elevated CO2 in pelagic fish, but support differences among fish species to susceptibility to elevated CO2, potentially associated with life history traits.
Continue reading ‘Tolerance to future elevated CO2 conditions in sablefish (Anoplopoma fimbria), a deep-water benthic dwelling fish species’Resilient adults but vulnerable larvae: demographic pathways of chiton decline under ocean acidification
Published 26 March 2026 Science ClosedTags: abundance, algae, biological response, BRcommunity, chemistry, field, laboratory, mollusks, morphology, mortality, North Pacific, otherprocess, phytoplankton, reproduction, vents
Highlights
- Natural CO₂ seep systems showed reduced intertidal chiton abundance.
- Adult chitons showed resilience to acidification in field and lab experiments.
- Larval survival and recruitment were strongly impaired under acidified seawater.
- Population declines are linked to early life-stage vulnerability.
- Loss of chitons may reduce grazing and bulldozing, reshaping intertidal communities.
Abstract
Ocean acidification (OA) is a major threat to marine calcifiers; however, the sensitivity across taxa and life stages remains elusive. In this study, we combined field surveys of natural CO₂ seeps with laboratory exposure, transplantation, and larval settlement experiments to assess the effect of OA on chitons, a group of calcifying grazers and bulldozers that play critical roles in the structure of rocky intertidal ecosystems. Field surveys revealed approximately 98.6% reduction in chiton (Acanthopleura loochooana, Liolophura japonica, and Acanthochitona rubrolineata) abundance at acidified habitats (pH 7.6), despite greater microalgal food availability and no detectable increase in predator abundance. Laboratory CO₂-exposure experiments showed no direct effect of OA on adult A. loochooana survival, which is consistent with the presence of protective structural features in the valves that confer resistance to dissolution. Transplant experiments revealed no evidence of increased adult A. loochooana mortality in the acidified habitats (pH 7.6). In contrast, larvae showed pronounced sensitivity to OA, with acidified seawater (pH 7.6) reducing larval settlement by approximately 81.5% compared to control conditions (pH 8.1); early life stages were the most vulnerable. These findings suggest that OA-associated decline in chiton abundance is mainly mediated by impaired recruitment rather than by direct adult mortality, predation, or food limitation. Given the role of chitons as grazers and bulldozers, their loss could substantially change intertidal community dynamics by decreasing grazing pressure and disturbing algal and microbial assemblages. Our findings underscore the criticality of considering life-stage vulnerability and ecological function when evaluating the ecosystem-level consequences of OA.
Continue reading ‘Resilient adults but vulnerable larvae: demographic pathways of chiton decline under ocean acidification’CO2 rise modulates the physiological performance of the diatoms Thalassiosira pseudonana and Thalassiosira weissflogii to light challenge
Published 25 March 2026 Science ClosedTags: biological response, growth, laboratory, physiology, phytoplankton
Highlights
- Ocean acidification boosts diatom growth independent of CO2 ramping speed.
- Acidification changed PSII repair and photoprotection strategies under high light.
- Species-specific adaptive advantages altered in acidified, light-variable oceans.
Abstract
Diatoms are major contributors to marine primary productivity and typically dominate well-mixed coastal environments characterized by rapidly fluctuating light levels. Yet, how the ongoing ocean acidification (OA) caused by rising CO2 affects their capacity to exploit such variable light is not well known. In this study, the diatoms Thalassiosira pseudonana and Thalassiosira weissflogii were cultured under two CO2 acidification regimes (gradual increase from ambient 400 to 1000 ppmV in ∼200 ppmV increments vs. direct elevation from 400 to 1000 ppmV) and exposed to high light stress to assess comparative physiological responses. Both diatoms showed significant increases in maximum electron transfer rate and saturation light intensity, with T. weissflogii additionally exhibiting elevated PsbA and Rubisco content. Growth rates increased by 15 % and 27 % for T. pseudonana and T. weissflogii respectively, with no significant difference between direct versus gradual CO2 elevation treatments. T. pseudonana demonstrated higher intrinsic susceptibility to PSII photoinhibition than T. weissflogii, OA didn’t significantly alter the functional absorption cross-section for PSII photoinactivation in either species. Notably, OA decreased PSII repair rates in T. pseudonana, while T. weissflogii maintained repair capacity through increased PsbA content and sustained non-photochemical quenching. These findings suggest T. weissflogii may gain a competitive advantage in future acidified, light-variable oceans due to its enhanced photoprotection and PSII repair capacity, highlighting species-specific resilience to combined environmental stresses.
Continue reading ‘CO2 rise modulates the physiological performance of the diatoms Thalassiosira pseudonana and Thalassiosira weissflogii to light challenge’Diel variability and decoupled pH-oxygen dynamics drive metabolic plasticity in kelp crabs from an upwelling seascape
Published 25 March 2026 Science ClosedTags: biological response, chemistry, crustaceans, laboratory, multiple factors, oxygen, physiology, respiration, South Pacific
Coastal upwelling zones, shaped by global change and human impacts, naturally impose hypoxia and acidification on marine species, creating selective pressures that influence physiological responses and drive phenotypic variability. Understanding these responses is crucial for predicting marine biodiversity dynamics in heterogeneous seascapes. We explored diel cycles of pH and dissolved oxygen (DO) and their influence on the metabolic performance of the kelp crab Taliepus dentatus, a species with limited larval dispersal. Kelp crabs from two environmentally contrasting sites along an upwelling seascape in central Chile—an upwelling shadow and an active upwelling zone—were studied using field sensor data and laboratory experiments. Active upwelling disrupted the regular diel pH cycle, resulting in persistently low pH (pHT ≈ 7.5) decoupled from oxygen dynamics. Experimental simulations of diel pH–DO fluctuations revealed that nocturnal low DO/low pH conditions (DO = 1 and 5 mg l⁻¹; pH = 7.5 and 7.8 for ‘upwelling’ and ‘downwelling’ conditions, respectively) reduced metabolic rates and respiratory quotient in crabs. Individuals from the active upwelling zone exhibited elevated metabolic rates, haemolymph pH and lactate accumulation under extremely low pH/low DO conditions compared with those from the upwelling shadow, suggesting site-specific physiological adjustments. These findings underscore the importance of incorporating natural variability into experimental designs and management frameworks aimed at predicting species resilience under climate change.
Continue reading ‘Diel variability and decoupled pH-oxygen dynamics drive metabolic plasticity in kelp crabs from an upwelling seascape’Experimental exposure to climate change scenarios imposed alterations on the morphological traits of sessile and low-motility marine invertebrates
Published 24 March 2026 Science ClosedTags: biological response, laboratory, Mediterranean, methods, mollusks, morphology, multiple factors, porifera, temperature
Background
Over the past 50 years, the oceans have absorbed over 90% of global warming heat, leading to warming, acidification and declining oxygen levels that are disrupting marine ecosystems and altering species distributions and productivity. The vulnerability of marine organisms to these changes depends on their biological traits, habitat conditions and adaptive capacity, influencing their growth, behaviour and overall population health. Micro-computed tomography (micro-CT) has been previously used for studying the morphological traits of marine invertebrates, which provide important insights into species functionality and responses to climate change and ocean acidification. Micro-CT enables non-destructive, high-resolution 3D analysis of internal and external structures, allowing precise measurement of traits such as density, porosity and morphology that are valuable for climate change research.
New information
The present manuscript describes micro-CT imaging datasets generated to investigate the effects of climate change on the morphological structure of two benthic marine invertebrates: the low-motility gastropod Hexaplex trunculus (Linnaeus, 1758) and the sessile sponge Chondrilla nucula Schmidt, 1862. Both species are considered particularly vulnerable to environmental stressors. To date, no study has investigated the effects of ocean warming and acidification on sponges using micro-CT technology. Using a common garden experimental design, individuals from geographically distinct populations exposed to different natural environmental regimes were subjected to combined warming and acidification scenarios to assess their morphological responses and adaptive capacity.
Continue reading ‘Experimental exposure to climate change scenarios imposed alterations on the morphological traits of sessile and low-motility marine invertebrates’Tolerance of egg and yolk-sac larval yellowfin sole (Limanda aspera) to ocean warming and acidification
Published 23 March 2026 Science ClosedTags: biological response, fish, fisheries, growth, laboratory, morphology, mortality, multiple factors, North Pacific, physiology, reproduction, temperature
Yellowfin sole (Limanda aspera) support the largest flatfish fishery in the world and contribute substantially to the eastern Bering Sea (EBS) flatfish catch. The EBS has been warming and acidifying, trends that are expected to intensify into the future. Sustainable management of yellowfin sole requires an understanding of how yellowfin sole respond to environmental change, which can be assessed through controlled laboratory investigations. Across four independent trials, yellowfin sole embryos and larvae were incubated at one of six experimental treatments spanning three temperatures (9°C, 12°C, and 15°C) and two pCO2 target levels (low and high), and a range of organismal and physiological responses were measured. Embryonic daily mortality rates and metabolic rates increased with increasing temperature but were not affected by ocean acidification. At- hatch and at- yolk absorption, morphometric measurements (length, dry weight, myotome height, and yolk area) were temperature- sensitive, but the response differed across the four trials. There was a consistent increase in length- based growth and yolk absorption rates with increasing temperature across trials. All morphometric and rate- based measurements were not affected by ocean acidification. Yellowfin sole metabolic enzyme activities were measured at- yolk absorption. Lactate dehydrogenase (anaerobic metabolism) and β- hydroxyacyl CoA dehydrogenase (fatty acid metabolism) both increased with increasing temperature, indicating elevated energy demand. Citrate synthase (aerobic metabolism) declined with increasing pCO2 levels, indicating potential metabolic suppression. Overall, embryonic and larval yellowfin sole demonstrated relatively high tolerance to ocean warming and acidification. We hypothesize the variation in temperature responses across the trials may be driven by maternal effects, which could support tolerance to future ocean conditions.
Continue reading ‘Tolerance of egg and yolk-sac larval yellowfin sole (Limanda aspera) to ocean warming and acidification’Ocean acidification disrupts the biomineralization process in the oyster Crassostrea virginica via intracellular calcium signaling dysregulation
Published 20 March 2026 Science ClosedTags: biological response, laboratory, molecular biology, mollusks, morphology, North Atlantic, physiology, reproduction
Calcium is a key component in the shell and skeleton structure, serving as a second messenger for regulating biomineralization across many species. Ocean acidification (OA) is well-studied for causing shell dissolution in marine bivalve species by disordering calcium deposition. However, the regulatory pathway of calcification affected by OA remains unclear. This study assessed eastern oyster (Crassostrea virginica) to determine how calcium signaling responds to elevated pCO2 and influences shell formation. Under elevated pCO2, increased calcium influx was found in mantle epithelial cells, followed by the upregulation of calmodulin, a primary sensor of intracellular calcium. Expression levels of shell matrix proteins (SMPs), representing shell construction conditions, were significantly upregulated in the CO2-induced mantle cells. Larval C. virginica exhibited developmental stage-dependent alterations in calcium signaling and SMPs disarrangement stimulated by pCO2. Pharmaceutical blockage of the calcium binding on calmodulin induced abnormal expression of downstream genes and shell matrix changes consistent with those caused by elevated pCO2. Restored SMPs expressions in CO2-treated mantle cells were achieved by rescuing the level of calcineurin, a downstream effector of calmodulin. These findings suggest that shell deformities under OA are primarily caused by the disruption of the calcium-calmodulin signaling pathway in mantle epithelial cells.
Continue reading ‘Ocean acidification disrupts the biomineralization process in the oyster Crassostrea virginica via intracellular calcium signaling dysregulation’Influence of ocean warming and acidification on juveniles of the true giant clam, Tridacna gigas, and its microalgal symbionts
Published 19 March 2026 Science ClosedTags: biological response, BRcommunity, laboratory, molecular biology, mollusks, mortality, multiple factors, North Pacific, phytoplankton, reproduction, temperature
Uncontrolled carbon dioxide emissions from human activities contribute to ocean warming and acidification. These alterations in ocean chemistry threaten marine organisms, such as the true giant clam, Tridacna gigas, which is already imperiled due to overharvesting and habitat destruction. To gain an understanding of the physiological and molecular responses of T. gigas and its symbiotic dinoflagellates to ocean warming and acidification, we subjected juvenile individuals to different treatments simulating predicted seawater pH (7.6 and 8.0) and temperature (28°C, 30°C, 32°C and 34°C) levels for the next century. Juvenile giant clams were able to tolerate sustained exposure to temperatures of up to 32°C and pH as low as 7.6, while exposure to higher temperature (34°C), regardless of pH level, resulted in total mortality after a week. However, symbiosis was compromised even in the sublethal treatments, as indicated by the decrease in Symbiodiniaceae density and changes in symbiont gene expression. Symbionts significantly upregulated genes involved in splicing, translation, fatty acid metabolism, and DNA repair, which may constitute an adaptive response, while downregulating genes involved in photosynthesis and transmembrane transport, suggests impaired transfer of photosynthates to the host. These findings demonstrate the vulnerability of the juvenile T. gigas holobiont to heat stress, highlighting the critical importance of continued conservation and management alongside efforts to mitigate global changes in ocean conditions to safeguard this iconic marine bivalve.
Continue reading ‘Influence of ocean warming and acidification on juveniles of the true giant clam, Tridacna gigas, and its microalgal symbionts’Differential impacts of ocean acidification and alkalinization on shell microstructure and molecular responses in Mytilus edulis
Published 18 March 2026 Science ClosedTags: biological response, laboratory, molecular biology, mollusks, morphology, mortality, North Pacific
Anthropogenic CO2 emissions are intensifying ocean acidification (OA), disrupting carbonate chemistry and threatening marine calcifiers such as mussels. Ocean alkalinity enhancement (OAE) has been proposed as a marine carbon dioxide removal (mCDR) strategy that can also mitigate OA, but its ecological safety for aquaculture species remains poorly understood. Here, we examined the short-term (21 days) responses of the blue mussel Mytilus edulis to OA (pH 7.3) and NaOH-based OAE (pH 9.0) using integrated shell microstructure analysis and transcriptomics. The results showed that while survival rates were unaffected, OA caused marked shell degradation and activated stress-related molecular pathways, whereas OAE enhanced shell integrity and stimulated growth-associated processes. Across treatments, a core set of biomineralization-related genes (e.g., VWA7, CA14, ALPL) exhibited expression shifts, suggesting central roles in carbonate homeostasis. In contrast, differential regulations of genes such as CA10 and VWDE revealed pH-specific responses. Notably, OAE induced minimal disruption of biomineralization and alleviated OA-related damage, highlighting its potential to support mussel aquaculture under future ocean conditions. While model simulations and plankton-scale experiments suggest global benefits of OAE, this study provides direct organism-level experimental evidence linking shell ultrastructure and transcriptomic responses under OA and OAE conditions. These findings offer mechanistic insights into mussel resilience and provide a critical empirical basis for evaluating the ecological safety of OAE as both a carbon sequestration strategy and a tool for sustainable aquaculture.
Continue reading ‘Differential impacts of ocean acidification and alkalinization on shell microstructure and molecular responses in Mytilus edulis’Novel in situ CO2 enrichment system reveals seagrass meadows are a refugium against coastal acidification for North Atlantic bivalves
Published 18 March 2026 Science ClosedTags: biological response, BRcommunity, chemistry, growth, laboratory, mollusks, mortality, North Atlantic, phanerogams
While the accumulation of anthropogenic CO2 in the atmosphere is causing a decline in global ocean pH, many eutrophic estuaries are already experiencing acidification due to accelerated respiration driving the consumption of dissolved oxygen (DO) and production of CO2, decreasing available carbonate ions (CO32-) and threatening marine calcifiers. Here, a novel in situCO2 enrichment system was constructed to examine the effects of coastal acidification on the growth and survival of two species of North Atlantic bivalves (Argopecten irradians and Crassostrea virginica) in two distinct estuarine habitats: a seagrass meadow and an unvegetated sandy bottom in an open water estuary. The in-situ system captured natural diel dynamics as ambient chambers displayed chemistry nearly identical to the surrounding water, while CO2-enriched, acidified chambers maintained a consistent ~Δ 0.3–0.5 pH offset. At the unvegetated sandy bottom site, A. irradians and C. virginica displayed significant reductions in growth and survival in the acidified chambers (pHT = 7.3–7.5; saturation state of aragonite, ΩAr = 0.6–0.9) relative to ambient conditions (pHT = 7.6–7.9; ΩAr = 1.6–2). At the seagrass site, while growth of A. irradians and C. virginica in the acidified treatments (pHT = 7.3–7.7; ΩAr = 0.7) receiving the same delivery of CO2 was, again, significantly slowed compared to the control (pHT = 7.5–8.1; ΩAr = 2 – 2.8), the growth reduction, mortality rates, and levels of acidification were attenuated compared to the sandy bottom experiment, evidencing the ability of seagrass to buffer seawater and serve as a potential acidification refuge for bivalves. Collectively, the novel experimental CO2 enrichment system constructed for this project demonstrates that coastal acidification can have deleterious effects on marine bivalve populations, and that future conditions as well as the habitat refuge offered by seagrasses must be considered when developing management and restoration plans for temperate estuaries.
Continue reading ‘Novel in situ CO2 enrichment system reveals seagrass meadows are a refugium against coastal acidification for North Atlantic bivalves’
