This research was intended to investigate the effects of reduced pH on the growth rates and diversity of phytoplankton in the coastal waters of Visakhapatnam in the Bay of Bengal. A short-term (six days) microcosm experiment was conducted with different pH conditions such as ambient (control-in situ pH), pH 8.0 (0.2 pH units drop from in situ pH) and pH 7.8 (0.4 pH units drop from in situ pH) corresponding to low, medium, and high future pH decline scenarios, respectively, to study the direct acidification impact on phytoplankton. The results revealed that the phytoplankton communities exhibit a wide range of responses including changes in growth rate during incubation. From the two treatments, a more pronounced response was observed in pH 7.8 conditions compared to the present pH scenario. Some phytoplankton communities exhibited positive growth responses to acidification, while others showed negative reactions in terms of biodiversity. Notably, Pseudo-nitzschia sp. became dominant during acidification, whereas larger centric diatoms such as Skeletonema spp., Chaetoceros spp., Rhizosolenia sp., Dactyliosolen fragilissimus, and Ditylum brightwellii showed no significant growth response to upcoming acidified conditions. This indicates a diverse array of physiological tolerance among the plankton species to environmental shifts. This study recommends further research to explore the impact of ocean acidification on other planktonic species in the coastal waters of Bay of Bengal.
Continue reading ‘Effects of pH on phytoplankton growth and diversity in a tropical coastal bay: an experimental study’Posts Tagged 'biological response'
Effects of pH on phytoplankton growth and diversity in a tropical coastal bay: an experimental study
Published 14 April 2026 Science Leave a CommentTags: biological response, BRcommunity, community composition, growth, Indian, laboratory, otherprocess, phytoplankton
Coexpression among eastern oyster host and microbiome genes suggests coordinated regulation of calcifying fluid chemistry
Published 13 April 2026 Science Leave a CommentTags: biological response, BRcommunity, laboratory, molecular biology, mollusks, North Atlantic, physiology, prokaryotes
Significance
Oysters and many marine animals build shells by controlling the chemistry of extracellular fluids where minerals form, yet whether microbes in these fluids influence calcification remains unclear. We show that oysters maintain favorable conditions for mineral formation by regulating the carbonate chemistry of the shell-forming fluid, and that resident microbes respond to these changes by expressing nitrogen- and sulfur-cycling genes capable of altering pH, alkalinity, and carbonate availability. Many of these microbial transcripts were tightly correlated with oyster immune and signaling genes, suggesting that host and microbiome processes may be linked within the calcifying environment. These findings point to a host–microbiome interaction in the regulation of calcifying-fluid chemistry that directly links microbial activity to the carbonate chemistry underlying biomineralization.
Abstract
Marine animals that build shells, such as oysters, carefully regulate the chemistry of their internal calcifying fluids, but the molecular mechanisms behind this control, as well as whether microbes play a role in calcification, are poorly understood. To better understand oysters’ molecular mechanisms and the role of their calcifying-fluid microbes, we conducted experiments that simulated a tidal cycle, measured calcifying fluid pH and total dissolved inorganic carbon, and characterized host and microbial gene expression via transcriptomics. These experiments showed that calcifying fluid pH remained relatively stable throughout tidal pH fluctuations, with corresponding increases in oyster transcripts for ion transport and acid–base regulation. These data provide direct evidence that tidal fluctuations drive rapid changes in oyster calcifying fluid chemistry. Most surprisingly, increases in microbial transcripts related to nitrogen and sulfur cycling correlated to higher calcifying fluid DIC, and coexpression network analysis revealed patterns of gene expression that linked oyster immune and neural pathways to microbial redox processes, providing molecular evidence of potential host modulation of microbial metabolism. Together, these results reveal that oysters actively regulate their calcifying fluid pH over short timescales, and the endemic microbiome metabolic responses can yield metabolites that influence calcifying fluid pH, alkalinity, and ultimately calcification. These data offer a perspective on oyster physiological capacity and, most importantly, the potential role of microbes in oyster calcification. In light of ongoing changes in ocean pH and temperature, oysters provide a model for studying animal–microbial responses to environmental acidification and how their interactions may shape biomineralization.
Continue reading ‘Coexpression among eastern oyster host and microbiome genes suggests coordinated regulation of calcifying fluid chemistry’Unravelling marine benthic functioning shifts under ocean acidification
Published 10 April 2026 Science Leave a CommentTags: algae, biological response, BRcommunity, calcification, community composition, crustaceans, field, Mediterranean, mollusks, morphology, otherprocess, photosynthesis, physiology, porifera, respiration, vents
Ocean acidification (OA) driven by increasing atmospheric CO2 is altering marine biodiversity. However, impacts of OA on ecosystem functioning at the community level, including calcification, primary production and nutrient uptake, remain largely unknown. Here, we conducted community transplant experiments at natural CO2 vents to assess how declining pH affects marine community species composition, biomass, and key ecosystem processes over time. Our results indicate that community shifts caused by declining pH lead to decreased biomass and calcification rates, while photosynthesis and nutrient uptake rates increased. By leveraging OA field model systems and in situ measurements of ecosystem functioning, this study provides critical insights into how OA-induced biodiversity loss reshapes the structure and functioning of temperate marine coastal ecosystems.
Continue reading ‘Unravelling marine benthic functioning shifts under ocean acidification’Intracellular acid-base regulation mediates a trade-off between shell and somatic growth in a clam under ocean acidification
Published 9 April 2026 Science Leave a CommentTags: biological response, growth, individualmodeling, laboratory, mesocosms, modeling, molecular biology, mollusks, North Pacific, physiology
Highlights
- Clams actively regulate intracellular pH against ocean acidification via CAc
- RNAi confirms CAc’s essential role in H+ efflux, measured by in vivo SIET.
- A CAc-sAC-NKA network forms a conserved regulatory pathway for acid-base balance.
- DEB model shows this pH defense sustains shell linear growth despite metabolic costs.
SUMMARY
Ocean acidification (OA) is predicted to threaten marine bivalves, casting them as passive victims of changing carbonate chemistry. Contributing to a revised understanding, we identified a conserved mechanism for acid-base regulation that supports intracellular resilience. Using the Manila clam Ruditapes philippinarum as a model, this study demonstrated that intracellular pH (pHi) homeostasis under elevated pCO2 was maintained through cytosolic carbonic anhydrase (CAc)-mediated H+ efflux. A causal link was established by combining in vivo scanning ion-selective electrode technique (SIET) with RNA interference (RNAi), where RpCAc knockdown suppressed H+ efflux and compromised pHi. A coordinated regulatory network involving CAc, soluble adenylyl cyclase (sAC), and Na+/K+-ATPase (NKA) was synergistically upregulated, suggesting an evolved adaptive pathway. Dynamic Energy Budget (DEB) modeling, calibrated with experimental data, revealed that this cellular compensation carries a high energetic cost, leading to a significant reallocation of resources: shell growth was maintained, but somatic growth was severely suppressed. These results elucidate a conserved cytoprotective mechanism that enables short-term tolerance of OA at a substantial somatic cost, redefining resilience to include energetic trade-offs.
Continue reading ‘Intracellular acid-base regulation mediates a trade-off between shell and somatic growth in a clam under ocean acidification’Climate-driven restructuring of phytoplankton productivity and community composition in the south-eastern Black Sea: insights from seasonal CO2-temperature manipulation experiments
Published 9 April 2026 Science Leave a CommentTags: biological response, Black Sea, community composition, laboratory, multiple factors, otherprocess, physiology, phytoplankton, temperature
Semi-enclosed marine systems with low buffering capacity, such as the Black Sea, are expected to experience amplified impacts of ocean acidification and warming, yet experimental evidence on their combined short-term effects on natural phytoplankton assemblages remains limited. Here, we present a seasonally resolved one-year study (four experiments conducted between 2022 and 2023) based on 48 h short-term microcosm incubation experiments using natural phytoplankton communities collected from coastal and offshore stations in the south-eastern Black Sea. CO2 concentrations (360, 600, and 760 ppm) and temperature (ambient and +3 °C) were manipulated to examine short-term physiological and compositional responses under projected climate scenarios. We hypothesised that CO2 and warming would exert both independent and interactive effects on short-term particulate organic carbon production (14C uptake rates) and relative community composition, with responses varying seasonally and being most pronounced during summer stratification.
Short-term particulate primary production increased by ∼22% and ∼36% at 600 and 760 ppm CO2, respectively (p<0.05), while warming provided an additional 14–22% enhancement depending on season, with significant CO2 × temperature interaction terms detected for total production (two-way ANOVA, p<0.05), indicating synergistic CO2–temperature effects. Warming and moderate CO2 enrichment were associated with increased relative contributions of nano- and picophytoplankton (by ∼6–10%), whereas high CO2 reduced the warming-driven shift toward smaller cells by maintaining microphytoplankton contributions ∼10–15% higher than in the warming-only treatment. Carbonate chemistry responded strongly to CO2 manipulation, with pH declining from in-situ values of 8.09–8.21 to 7.06–7.52 during incubations and minor reductions in total alkalinity, reflecting the weak buffering capacity of the system. Pigment composition and microscopy indicated short-term increases in dinoflagellate relative abundance (∼12–18%) and concurrent declines in diatom markers, accompanied by accelerated nitrate depletion and reduced nitrogen-to-phosphorus (N:P) ratios, consistent with enhanced nitrogen limitation.
Overall, these findings demonstrate pronounced short-term sensitivity of natural phytoplankton assemblages in the south-eastern Black Sea to combined CO2 and warming under controlled incubation conditions. Because these results derive from 48 h microcosm experiments, they represent short-term physiological and compositional responses rather than direct evidence of long-term ecosystem restructuring, yet the observed patterns suggest potential implications for trophic efficiency, harmful algal bloom development, and carbon cycling in this low-buffer, stratified basin under future climate forcing.
Continue reading ‘Climate-driven restructuring of phytoplankton productivity and community composition in the south-eastern Black Sea: insights from seasonal CO2-temperature manipulation experiments’Responses of reef fish populations to similar environmental changes across distant oceanic islands
Published 9 April 2026 Science Leave a CommentTags: abundance, adaptation, biological response, chemistry, field, fish, otherprocess, South Atlantic
Oceanic islands are among the most remote and understudied regions of the planet, yet they harbour unique reef fish communities that are increasingly vulnerable to global environmental change. Because these islands are geographically isolated, their populations are often assumed to respond mainly to local environmental conditions. However, by analysing temporal patterns in oceanographic variables across two distant systems (3204 km apart) in the South Mid-Atlantic Ridge (both encompassed by marine protected areas—MPAs), we found that temporal alignment in environmental conditions was associated with coordinated shifts in counts of nine reef fish populations in each study area. Among the evaluated variables, pH emerged as the most influential factor. Despite the divergent responses among reef fishes, possibly reflecting differences in physiological plasticity, shared temporal patterns in pH appeared central to parallel population patterns observed across assemblages. Increases in sea surface height and chlorophyll-a played secondary roles, potentially benefiting some populations, although such effects may be transient. These results suggest that climate-driven convergence in environmental conditions can override geographic isolation, promoting similar biological responses that may reduce resilience and increase extinction risk. Given that both islands are legally protected, our findings highlight that even MPAs are not insulated from large-scale oceanographic stressors, underscoring the need for long-term monitoring and adaptative conservation strategies for remote reef systems.
Continue reading ‘Responses of reef fish populations to similar environmental changes across distant oceanic islands’Investigation of the adaptive mechanisms to ocean acidification in Patella species from CO2 vent systems of the Mediterranean Sea
Published 7 April 2026 Science Leave a CommentTags: adaptation, biological response, field, Mediterranean, molecular biology, mollusks, morphology, otherprocess, physiology, respiration, vents
The continuous increase in anthropogenic carbon dioxide (CO2) emissions into the atmosphere is one of the main factors contributing to ocean acidification (OA). In fact, CO2 is partially absorbed by the oceans, where it alters carbonate chemistry and seawater pH, which is expected to decrease from the current level of 8.1 to 7.7 by 2100. OA exerts harmful impacts primarily on calcifying organisms, as it affects the availability of carbonates, which makes their calcareous structures thinner and more fragile. Moreover, several studies have described the detrimental effects of OA across many marine taxa, affecting important physiological and metabolic mechanisms. On the other hand, research conducted at CO2 vent systems, which are volcanic naturally acidified sites, showed that several organisms can survive under acidified conditions through specific tolerance and/or adaptive strategies. Among these organisms, the gastropod Patella spp. is one of the few calcifiers capable of inhabiting naturally acidified sites, such as the Castello Aragonese vent systems at Ischia Island and the San Giorgio vent systems at Sicily Island. Nonetheless, the complex mechanisms that allow survival and potential adaptation of these organisms to natural OA conditions need to be understood. Therefore, this PhD study aimed at investigating the potential molecular, physiological, metabolic, genetic, and epigenetic mechanisms that enable these organisms to tolerate and survive under OA conditions through a stepwise approach. Specifically, this PhD research attempted to answer the following questions: • Does OA entail a stressful condition in resident populations of Patella spp. living at reduced pH conditions, thereby affecting their overall well-being and health status? • Are there specific physiological, metabolic, and biochemical mechanisms that contribute in defining tolerance to OA? • Are limpets genetically adapted to OA? • Is DNA methylation contributing to promote tolerance to OA in limpets? • What is the role of environmental conditions in shaping the response to OA? The first chapter of this thesis considered three Patella species (P. caerulea, P. rustica, and P. ulyssiponensis) collected from the CO2 vent systems of the Castello Aragonese (Ischia Island). This vent system exhibits a natural acidification gradient ranging from ambient pH (N1: pH = 8.1), to intermediate pH (N2: pH = 7.7), and to extremely low pH (N3: pH < 7.4). Resident populations were collected along the gradient and at San Pietro, an additional ambient pH site (pH = 8.1), located at a distance of 4 km from the Castello vent. In addition, a 30-day in situ transplant experiment was conducted using P. caerulea, in order to evaluate the short-term responses induced by OA. Morphometric traits, such as shell length, height, width, and soft-tissue weight, were measured, and a set of biomarkers related to antioxidant system, energy metabolism, neurotoxicity, and biomineralization was applied. For resident populations, P. caerulea showed increased size and energy reserves at the extremely acidified site, likely related to a shift from erect calcified algae to biofilm, or to reduced competition and/or predatory pressure under acidified conditions. Biochemical endpoints measured in both P. caerulea and P. ulyssiponensis were not modified by OA. Conversely, P. rustica exhibited significant modulation of nearly all biochemical parameters, likely due to its different position on the rocky shore, which makes this species more exposed to tidal fluctuations and therefore to an additional source of disturbance, besides OA. Short-term exposure of P. caerulea to OA resulted in a decrease in protein content and an increase in glycogen content at the extremely acidified site, with the induction of superoxide dismutase and glutathione-S-transferase activities at intermediate pH, suggesting the activation of compensatory mechanisms to cope with reduced pH conditions. Overall, results revealed a distinct response to OA of the three species of Patella. Moreover, the increased size and energy-related endpoints observed in P. caerulea and P. rustica highlighted the need to further investigate energy metabolism aspects, in order to better understand the trade-offs between compensatory mechanisms and the energetic cost underlying tolerance to OA. Based on these evidences, the second chapter focused exclusively on P. caerulea, with the aim of deeply investigating metabolic and physiological stress-responses, comparing resident populations of the Castello Aragonese vent systems and transplanted organisms, similarly to the first chapter. Respiration and ammonia excretion rates were measured four times across the year. Additionally, untargeted metabolomics analyses were performed to investigate metabolic pathways potentially involved in response to OA. Only during summer, OA increased respiration rate in limpets from the most acidified site, while simultaneously reduced excretion rates, likely to allocate more energy resources to face the increasing temperature, besides OA. Furthermore, both resident and transplanted populations up-regulated carnitine metabolism, suggesting that OA induced an increase of energy production through β-oxidation and subsequent Krebs cycles. Moreover, several metabolites involved in osmoregulation, oxidative stress, and nucleic acid mechanisms were increased. Overall, results seem to confirm the presence of negative effects and of an energetic cost underpinning tolerance to OA. The third and final chapter investigated the potential influence of phenotypic plasticity, genetic adaptation, and DNA methylation in tolerance to OA in adult and juvenile populations of P. caerulea collected from two CO2 vent systems of the Mediterranean Sea. Adult and juvenile specimens were sampled along the acidification gradient of the Castello Aragonese vent systems of Ischia Island (San Pietro/N1: pH = 8.1; N2: pH = 7.7; N3: pH < 7.4) and from the San Giorgio vent systems of Sicily Island (Patti: pH = 8.1; San Giorgio: pH = 7.8). Following genomic DNA extractions from foot tissue and individual libraries preparation with the NEB Next® Enzymatic Methyl-seq Kit, samples were sequenced on the Illumina NovaSeq 6000 sequencer. Data processing and analyses were conducted on Euler platform mainly using biscuit tool, which enabled to simultaneously extract genomic and epigenomic information from DNA methylation sequencing. Population genomics and epigenomics analyses revealed divergent patterns between the Ischia and Sicily populations. Populations from the Ischia vent revealed marked signs of genomic differentiation, particularly in adults from the intermediate and extremely low pH sites, while reduced differences in DNA methylation levels were detected, especially in adults. These findings suggest a strong signature of purifying selection acting on standing genetic variation, through a within-generation response, likely driven by the more pronounced pH fluctuations occurring at these sites. Conversely, no genomic differentiation was observed between the Sicily populations, but greater differences in DNA methylation were detected between acidified and non-acidified sites at both adult and juvenile stages. These results revealed that this epigenetic mechanism, rather than genomic changes, may play a key role in the response to the milder pH variations of this vent and potentially enhance organisms’ tolerance to OA. In conclusion, this PhD project investigated tolerance to OA in limpets through a holistic approach that, for the first time, integrated morphological, physiological, metabolic, biochemical, genetic, and epigenetic analyses. Overall, findings revealed that Patella spp. has the ability to survive under acidified conditions even though with a physiological and metabolic cost, which could be partially compensated by more favorable environmental conditions. This study further highlights the importance of conducting research in naturally acidified environments, since it allows to formulate more realistic hypotheses about the ability of marine organisms to persist in future changing oceans.
Continue reading ‘Investigation of the adaptive mechanisms to ocean acidification in Patella species from CO2 vent systems of the Mediterranean Sea’The impact of climate change on lobster production: a systematic synthesis of literature
Published 6 April 2026 Science Leave a CommentTags: biological response, crustaceans, fisheries, growth, morphology, mortality, physiology, reproduction, review
Climatic impact-drivers are projected to change in coastal and marine regions globally, especially towards the fisheries production of the commercially important global shellfish, such as lobster species. Thus, there is an immediate need for ongoing, rigorous systematic review that continuously assesses and analyzes the risk of climatic factors towards lobsters’ production (i.e., growth, reproduction, etc.). A global relevant literature was analyzed from the inception to 31st December 2024. The review targets commercially important lobster, across various life history stages. The current study presents a systematic analysis of the research articles on lobster growth, reproduction, and development from relevant literature through two main academic databases, Scopus (n = 284) and Web of Science (n = 310). During literature search, duplicate articles were removed manually (n = 177). A total of 46 research articles were generated from the strict systematic selection process at various life history stages of lobsters. Climate change elements such as temperature, salinity, carbon dioxide, pH, and hypoxia significantly impact ovigerous females, reproduction, hatching success, larval stages, and juvenile development of lobsters. As global climate change intensifies, the reproductive and developmental capacity of lobster populations may be increasingly compromised, particularly in early life history stages. To date, a comprehensive synthesis of reproductive and biological impacts across taxa and regions has been lacking. This review provides a foundational reference for future assessments and adaptation strategies for sustainable management of lobsters under climate change.
Continue reading ‘The impact of climate change on lobster production: a systematic synthesis of literature’Combined ecotoxicity of microplastics and crude oil co-pollutants: occurrence, distribution and its synergistic impact with ocean acidification on Artemia franciscana
Published 3 April 2026 Science Leave a CommentTags: biological response, crustaceans, Indian, laboratory, multiple factors, physiology, plastics, reproduction, toxicants, zooplankton
Microplastics (MPs) are recognized as a global concern, with specific attention shifted towards marine MPs pollution. This particular study investigates the abundance and distribution of crude oil-loaded microplastics (COMPs) along the Chennai coastline, Tamil Nadu, India and evaluates their combined toxicological effects with ocean acidification on Artemia franciscana. Spatial analysis revealed that Ennore Creek exhibited the highest MP concentration (10.82 ± 0.2 items/L). Polypropylene was recorded as the predominant polymer type followed by low density polyethylene and polyethylene terephthalate, with particle size ranging from 250 to 500 µm. COMPs were detected across all sampling sites, with concentrations declining from Ennore Creek (0.21 ± 0.03 items/L) to Kasimedu Beach (0.10 ± 0.02 items/L). The adsorption of crude oil on MPs is primarily mediated by physical interaction with multi-layer adsorption behaviour. The results highlighted that increase in MP concentration and decrease in seawater pH significantly induced acute toxicity and oxidative stress responses in A. franciscana. At pH 7.8, experimental groups exposed to 0.5 mg/mL of COMPs developed higher ROS, SOD and catalase activity (p<0.001). Whereas control groups alone showed significant increase in oxidative stress responses at lower pH level such as pH 7.8 and 8.0. Combined exposure of COMPs and low pH conditions significantly increased oxidative damages in A. franciscana and affected its hatching ability. The observations from this study emphasize the urgent need for integrated monitoring and further research to explore combined toxicological effects of MPs and ocean acidification to other marine organisms as well.
Continue reading ‘Combined ecotoxicity of microplastics and crude oil co-pollutants: occurrence, distribution and its synergistic impact with ocean acidification on Artemia franciscana’Ocean acidification affects the timing of puberty and the reproductive output in a marine temperate fish
Published 2 April 2026 Science Leave a CommentTags: adaptation, biological response, fish, laboratory, morphology, mortality, North Atlantic, otherprocess, reproduction
Ocean acidification (OA) is a major climate-related threat to fish that can disrupt the regulation of the reproductive axis of fish, impacting reproductive success. However, previous studies have only focused on a single reproductive cycle and reported increased fecundity in some species exposed to OA. Since acclimation over several reproductive cycles can occur, it is necessary to evaluate successive reproductive cycles for predicting the actual resilience of species to OA. In this study we assessed the impact of lifetime exposure to different ocean pH/pCO2 levels (Current condition, Moderate OA and High OA) on the sexual maturation and spawning phenology of the European sea bass, over its two first reproductive periods. We tested the hypothesis that OA would exert its greatest impact at the onset of puberty (first reproduction). Accordingly, High OA exposure induced an earlier onset of puberty in both sexes, resulting in a longer spawning period and an increased fecundity. These effects were reduced during the second reproductive season. However, OA affected egg quality and sperm motility profile during the second reproductive season, leading to a total mortality at hatching of embryos spontaneously produced. This mortality was not observed in embryos produced through hormone-induced oocyte maturation and in vitro fertilisation. These results suggest that OA affects the regulation of oocyte maturation and/or the synchronisation of eggs and sperm release. The OA-driven shift in spawning may misalign with optimal environmental conditions for offspring survival. This increases the population’s vulnerability and could favour species whose reproduction is more resilient to OA.
Continue reading ‘Ocean acidification affects the timing of puberty and the reproductive output in a marine temperate fish’Impacts of ocean acidification on marine zooplankton: a review of physiological, developmental, and reproductive responses
Published 31 March 2026 Science ClosedTags: adaptation, biological response, otherprocess, physiology, reproduction, review, zooplankton
Acidification. The increasing levels of carbon dioxide CO₂ in the atmosphere are leading to ocean acidification, and this is altering the chemical content of marine water and is endangering life in the oceans. The examples of marine zooplankton, including Copepods, Pteropods, krill, and larvae of invertebrates are essential to the pelagic food webs and carbon cycles, even though they differ in their tolerance to low PH concentration and high pCO₂ levels. Early developmental phases are particularly vulnerable, with them showing retardation in developmental stages, reduced hatch rates, physical deformities as well as a lack of calcification. Higher carbon dioxide CO₂ levels interfere with the acid-base balance, increase oxidative stress and alter the allocation of metabolism, leading to trade-offs that lower growth, reproduction and survival rates. Calcifying organisms such as the pteropods are highly susceptible whereas some of the non-calcifying copepods exhibit a level of physiological resilience. Negative effects of other stressors may be affected by increased temperature, oxygen depletion, and nutrient enrichment which may further compound negative effects. There is some evidence that there is some possible acclimation in the short term and that there might be transgenerational plasticity but we do not understand adaptive capacity in the long term. Knowledge gaps exist in regard to multigenerational response, non-calcifying and gelatinous species and how physiological plasticity occurs. Species-specific responses are an important aspect of predictive models to estimate the impact of the ecosystem and guide conservation efforts. To ensure marine ecosystems remain stable as ocean acidification continues, vulnerable zooplankton should be safeguarded to preserve tropic structure, nutrient cycling, and nutrient stability.
Continue reading ‘Impacts of ocean acidification on marine zooplankton: a review of physiological, developmental, and reproductive responses’pCO2-induced seawater acidification influencing cadmium toxicity on antioxidant defenses responses in juvenile Manila clam Ruditapes philippinarum
Published 30 March 2026 Science ClosedTags: biological response, laboratory, metals, mollusks, multiple factors, North Pacific, physiology
Highlights
- GSH system and SOD-CAT act as complementary lines of antioxidant defense
- SA alters Cd effects on antioxidants depending on metal concentration
- High SA overrides Cd effects on antioxidant defenses in Manila clams
- Combined high SA and Cd exposure overwhelms antioxidant capacity
- Candidate biomarkers for monitoring SA or Cd stress are proposed
Abstract
Ocean acidification is known to interact with heavy metals, impacting physiological processes of marine organisms. This study investigated antioxidant defenses of juvenile Manila clam Ruditapes philippinarum exposed to cadmium (Cd) across ambient-relevant to high concentrations, under pCO2-induced seawater acidification (SA) scenarios corresponding to IPCC ocean pH projections. Results revealed that clam’s antioxidant system, encompassing GSH defense system and SOD-CAT defense lines, collectively combated oxidative stress dependent on specific stressors and their stress levels. GSH system is vital for detoxification and maintaining redox balance, while SOD and CAT are essential for scavenging ROS. Cd exposure notably activated GSH redox cycle, and SA markedly inhibited the antioxidants associated with this cycle. SOD and CAT exhibited distinct regulatory pathways with asynchronous responses to SA and Cd co-exposure. SA conditions modulate Cd-induced antioxidant response dependent on metal concentrations. Antioxidant biomarkers responded more prominently to SA and Cd interactions than to individual exposure, particularly, high SA effects could override Cd effects on antioxidant responses. Although SA effects did not directly induce lipid peroxidation, elevated MDA levels under Cd exposure occurred only under SA conditions, indicating insufficient antioxidant defense against lipid peroxidation under excess co-exposure. GSH and SOD were more sensitive to SA exposure, whereas MDA and GST were sensitive to Cd exposure, suggesting their potential as biomarkers for assessing SA or Cd-induced oxidative stress, respectively. These findings provide insights into interplay between metal toxicity and ocean acidification on antioxidant defenses in bivalves, shedding light on their strategies to combat metal pollution amidst global ocean change.
Continue reading ‘pCO2-induced seawater acidification influencing cadmium toxicity on antioxidant defenses responses in juvenile Manila clam Ruditapes philippinarum’Metabolic rate measurements of two benthic invertebrates under simulated climate change conditions
Published 30 March 2026 Science ClosedTags: adaptation, biological response, laboratory, Mediterranean, mollusks, morphology, multiple factors, otherprocess, porifera, respiration, temperature
Background
Climate change is profoundly altering marine ecosystems through ocean warming and acidification. These stressors are especially pronounced in the Mediterranean Sea, a climate change hotspot projected to warm faster than the global average. Increased temperatures and reduced pH directly affect metabolic processes in marine invertebrates by elevating respiration rates up to species-specific thermal limits, beyond which physiological performance declines. Ocean acidification further disrupts metabolic processes by increasing energetic maintenance costs. Sessile and sedentary marine invertebrates, such as sponges and benthic gastropods, are particularly exposed to such environmental shifts due to their limited ability to escape unfavorable conditions, making physiological plasticity and local adaptation crucial for persistence.
New information
This manuscript presents a dataset of oxygen consumption rates and wet weight measurements for two low-mobility marine species, the gastropod Hexaplex trunculus and the sponge Chondrilla nucula. Using a common garden experiment, individuals from North and South Aegean populations were exposed for three months to simulated climate change conditions combining increased temperature and reduced pH. The dataset documents respiration measurements obtained using metabolic chambers after three months of exposure, allowing comparisons across species, geographic origin, and experimental treatments.The dataset accounts for intraspecific variation in these responses, providing insight into potential adaptive differences among geographically distinct populations. These data provide a resource for future analyses of metabolic responses of marine invertebrates to combined warming and acidification conditions.
Continue reading ‘Metabolic rate measurements of two benthic invertebrates under simulated climate change conditions’Skeletal growth and loss of the cold-water coral Lophelia pertusa from multiple environmental drivers in a year-long experiment
Published 27 March 2026 Science ClosedTags: biological response, corals, dissolution, growth, laboratory, morphology, mortality, multiple factors, North Atlantic, oxygen, physiology, respiration, temperature
Colony-forming scleractinian cold-water corals (CWCs) are important ecosystem engineers, forming complex 3-dimensional habitats in the deep sea, which in turn sustain high biodiversity. They are threatened by future environmental changes such as ocean acidification, warming, deoxygenation, and food limitation, but little is known about the effect of these drivers in combination or on the long-term. We conducted a year-long aquarium experiment with Lophelia pertusa (syn. Desmophyllum pertusum) under projected end-of-century conditions, investigating the combined effect of differences in pH (8.1 and 7.7), temperature (9°C and 12°C), oxygen concentration (100% and 90%) and food supply (100% and 60%) on coral survival, growth, respiration rates, skeletal dissolution and energetic reserves. Growth rates of L. pertusa decreased significantly in both multiple driver treatments, resulting in negative and more variable growth rates. However, growth rates only started to decrease after 4.5 months, clearly showing a delayed response. In addition, survival rates and energetic reserves were slightly lower in multiple driver treatments, whereas L. pertusa was not affected by reduced oxygen concentration examined as a single factor. Negative growth rates in multiple driver treatments were driven by dissolution of bare skeletal parts due to reduced seawater pH and temporary aragonite undersaturation, visualised here through micro-computed tomography images. While live CWCs may be able to cope with projected future environmental changes over the timescale of 1 year, ocean acidification will lead to dissolution of the dead skeletal framework of CWC reefs and net loss, reducing the complexity and associated biodiversity of these reefs. However, the challenge remains in closing the gap between long-term experiments and the much longer-term chronic exposure of CWCs to projected environmental changes.
Continue reading ‘Skeletal growth and loss of the cold-water coral Lophelia pertusa from multiple environmental drivers in a year-long experiment’Individual foraminiferal analysis: a promising tool for high-resolution temperature and pH reconstruction
Published 27 March 2026 Science ClosedTags: biogeochemistry, biological response, chemistry, field, methods, paleo, protists
Compared with traditional bulk foraminiferal analysis methods, in situ analysis of individual foraminiferal tests (individual foraminiferal analysis or IFA) offers several advantages over traditional bulk methods, including enhanced temporal resolution where fossiliferous sample material is limited as well as potentially resolving seasonal-scale climate variability in deep time. Despite these advantages, applications of element-to‑calcium (El/Ca) ratios and δ11B in benthic foraminifera using IFA remain limited, and the biogeochemical drivers of intra-test and inter-test geochemical variability are poorly constrained. In this study, we systematically evaluate El/Ca ratios and δ11B in individual benthic foraminifera. By analysing Holocene epifaunal benthic foraminiferal species Cibicidoides wuellerstorfi from a deep ocean core site (ODP Site 999), we conclude that intra- and inter-test variabilities are regulated by ontogenetic effects resulting in inter-test variabilities of ±0.14 mmol/mol Mg/Ca, ± 14 μmol/mol B/Ca, and ± 0.18 ‰ δ11B. Application of the IFA method to epifaunal benthic foraminifera species Cibicides lobatulus from a box core in the English Channel, UK reveals ~0.1 pH units acidification and ~ 1 °C warming since the mid-19th century. By demonstrating that individual-level variability in reconstructed temperature and pH tracks seasonal trends in the available contemporaneous water-column instrumental measurements at the same site, we provide a ground-truthing to our multi-proxy IFA methodology, and also demonstrate the potential for benthic IFA to provide seasonal-scale reconstructions of ocean climate over hundreds to millions of years.
Continue reading ‘Individual foraminiferal analysis: a promising tool for high-resolution temperature and pH reconstruction’Tolerance to future elevated CO2 conditions in sablefish (Anoplopoma fimbria), a deep-water benthic dwelling fish species
Published 26 March 2026 Science ClosedTags: biological response, fish, laboratory, molecular biology, North Pacific, performance, physiology
Numerous studies have found that elevated CO2 levels in marine waters induced significant physiological and behavioral effects in fish. In an earlier study of coho salmon (Oncorhynchus kisutch), we observed that elevated CO2 exposure impaired signaling in the olfactory bulb, through a mechanism likely involving interference of gamma-aminobutyric acid (GABA) signaling. However, the effects of elevated CO2 may be species-specific, and there have been few studies addressing the effects of elevated CO2 on benthic fish. In the current study, we investigated the effects of elevated CO2 exposures on the deep-water benthic species, sablefish (Anoplopoma fimbria). Sablefish were exposed to three different levels of CO2 (700, 1600 and 2700 µatm) for two weeks, followed by behavioral, neurophysiological and gene expression analysis of the olfactory system. Analysis of behaviors mediated by food odors, including swimming activity and food strikes did not differ between fish maintained under elevated or control CO2 conditions. Similarly, electro-olfactogram recordings of odorant signaling did not differ among treatment and controls. mRNA expression patterns of olfactory bulb genes that were altered in coho salmon exposed to elevated CO2 levels, were similarly examined in sablefish. Sablefish mRNAs encoding genes involved in GABA-mediated olfactory bulb signaling were generally unaffected by high CO2, but aldh9a1, an enzyme involved in the synthesis of GABA, was elevated by high CO2. The results of our study contrast other studies demonstrating adverse effects of elevated CO2 in pelagic fish, but support differences among fish species to susceptibility to elevated CO2, potentially associated with life history traits.
Continue reading ‘Tolerance to future elevated CO2 conditions in sablefish (Anoplopoma fimbria), a deep-water benthic dwelling fish species’Resilient adults but vulnerable larvae: demographic pathways of chiton decline under ocean acidification
Published 26 March 2026 Science ClosedTags: abundance, algae, biological response, BRcommunity, chemistry, field, laboratory, mollusks, morphology, mortality, North Pacific, otherprocess, phytoplankton, reproduction, vents
Highlights
- Natural CO₂ seep systems showed reduced intertidal chiton abundance.
- Adult chitons showed resilience to acidification in field and lab experiments.
- Larval survival and recruitment were strongly impaired under acidified seawater.
- Population declines are linked to early life-stage vulnerability.
- Loss of chitons may reduce grazing and bulldozing, reshaping intertidal communities.
Abstract
Ocean acidification (OA) is a major threat to marine calcifiers; however, the sensitivity across taxa and life stages remains elusive. In this study, we combined field surveys of natural CO₂ seeps with laboratory exposure, transplantation, and larval settlement experiments to assess the effect of OA on chitons, a group of calcifying grazers and bulldozers that play critical roles in the structure of rocky intertidal ecosystems. Field surveys revealed approximately 98.6% reduction in chiton (Acanthopleura loochooana, Liolophura japonica, and Acanthochitona rubrolineata) abundance at acidified habitats (pH 7.6), despite greater microalgal food availability and no detectable increase in predator abundance. Laboratory CO₂-exposure experiments showed no direct effect of OA on adult A. loochooana survival, which is consistent with the presence of protective structural features in the valves that confer resistance to dissolution. Transplant experiments revealed no evidence of increased adult A. loochooana mortality in the acidified habitats (pH 7.6). In contrast, larvae showed pronounced sensitivity to OA, with acidified seawater (pH 7.6) reducing larval settlement by approximately 81.5% compared to control conditions (pH 8.1); early life stages were the most vulnerable. These findings suggest that OA-associated decline in chiton abundance is mainly mediated by impaired recruitment rather than by direct adult mortality, predation, or food limitation. Given the role of chitons as grazers and bulldozers, their loss could substantially change intertidal community dynamics by decreasing grazing pressure and disturbing algal and microbial assemblages. Our findings underscore the criticality of considering life-stage vulnerability and ecological function when evaluating the ecosystem-level consequences of OA.
Continue reading ‘Resilient adults but vulnerable larvae: demographic pathways of chiton decline under ocean acidification’The role of seagrass in modifying dissolved oxygen and pH in coastal systems: a meta-analysis
Published 26 March 2026 Science ClosedTags: biological response, chemistry, field, phanerogams, review
Highlights
- Seagrass productivity drives diel pH–DO variation, enhancing local buffering capacity
- Oxygen–pH coupling highlights seagrass role in mitigating acidification during photosynthesis
- Studies should integrate temperature, salinity, and light to parse biological drivers
- Expanded geographic scope, especially tropics and Global South, is urgently needed
- Standardized pH scales and advanced sensors to improve comparability and monitoring
Abstract
Seagrass meadows, highly productive ecosystems, can influence local water chemistry by increasing dissolved oxygen in the water column and removing dissolved CO2 thus raising pH. This study provides the first quantitative synthesis of literature comparing pH and dissolved oxygen (DO) between systems with and without seagrasses. Through a systematic literature review and meta-analysis, we collated and analysed data from 63 studies reporting pH values and 70 studies reporting DO. Across studies, seagrass habitats were associated with slightly higher mean pH relative to non-seagrass habitats. Seagrass habitats showed the highest mean pH (8.11 ± 0.30) and the greatest diel variability (0.47 ± 0.65) of all habitats investigated with unvegetated areas exhibiting lower mean pH and reduced variability. The diel pH range was also significantly higher in seagrass habitats (p = 0.024). The pooled standardized mean difference was small (0.15), indicating a modest overall effect of seagrass presence on pH across studies. Although mean DO concentrations were slightly lower in seagrass habitats compared to other vegetated systems, they experienced fewer hypoxic events (12% of values < 2 mg/L) compared to other vegetated systems (55%). Generalized additive models identified DO as the strongest predictor of pH, with minor contributions from temperature and salinity. Overall, seagrass habitats are associated with increasing average pH and reducing hypoxia across multiple sites and regions. However, the magnitude and direction of effects vary widely among studies (I2 = 97%). These findings indicate that seagrass influences on water chemistry are context-dependent and likely driven by interactions among biological processes and local environmental conditions. Key knowledge gaps were identified; including the need for a greater focus on H+ concentration and the need for more research on seagrass ecosystems in underrepresented geographical regions.
Continue reading ‘The role of seagrass in modifying dissolved oxygen and pH in coastal systems: a meta-analysis’Characteristics of meiofaunal community in the subtidal zone near Hupo, anticipating ocean acidification on the coast of Korea
Published 25 March 2026 Science ClosedTags: abundance, biological response, chemistry, community composition, crustaceans, field, nematodes, North Pacific, otherprocess, zooplankton
This study aimed to investigate the meiofauna community characteristics in coastal waters affected by ocean acidification. Therefore, the meiofauna communities in the coastal waters of Hupo in Uljin-gun, which showed a high ocean acidification trend in the integrated data on the coastal areas of South Korea for the previous ten years, were monitored over five years. During the study period, the mean abundance of total meiofauna communities expressed in population density was 614 individuals (Inds.)/10 cm2. The most dominant taxa were nematodes (65–70%) and harpacticoids (7–20%); these two taxa accounted for approximately 80% of the total meiofauna abundance. Station (St.) 5 and 10, which had the lowest seawater pH values, showed the lowest average abundance values for harpacticoids (average 46 Inds./10 cm2) and nauplius (average 4 Inds./10 cm2) among the major meiofaunal groups over the 5-year period. In addition, St. 5 indicated the lowest meiofaunal diversity index of 0.54. To examine the effect of ocean acidification on meiofauna communities at the species level, species of nematodes, the most dominant taxon, were analyzed. The results indicated that the number of nematode species at St. 10, one of the two stations with the lowest pH, was the lowest compared to those at other stations. Analysis of c-p values for nematode species showed that both species sensitive to environmental disturbance and species resistant to environmental pollution appeared at high rates. According to the feeding type of nematodes, epistrate feeders accounted for a remarkably high proportion at St. 10. This study provides various data on meiofauna community characteristics to understand the effects of ocean acidification on coastal ecosystems.
Continue reading ‘Characteristics of meiofaunal community in the subtidal zone near Hupo, anticipating ocean acidification on the coast of Korea’CO2 rise modulates the physiological performance of the diatoms Thalassiosira pseudonana and Thalassiosira weissflogii to light challenge
Published 25 March 2026 Science ClosedTags: biological response, growth, laboratory, physiology, phytoplankton
Highlights
- Ocean acidification boosts diatom growth independent of CO2 ramping speed.
- Acidification changed PSII repair and photoprotection strategies under high light.
- Species-specific adaptive advantages altered in acidified, light-variable oceans.
Abstract
Diatoms are major contributors to marine primary productivity and typically dominate well-mixed coastal environments characterized by rapidly fluctuating light levels. Yet, how the ongoing ocean acidification (OA) caused by rising CO2 affects their capacity to exploit such variable light is not well known. In this study, the diatoms Thalassiosira pseudonana and Thalassiosira weissflogii were cultured under two CO2 acidification regimes (gradual increase from ambient 400 to 1000 ppmV in ∼200 ppmV increments vs. direct elevation from 400 to 1000 ppmV) and exposed to high light stress to assess comparative physiological responses. Both diatoms showed significant increases in maximum electron transfer rate and saturation light intensity, with T. weissflogii additionally exhibiting elevated PsbA and Rubisco content. Growth rates increased by 15 % and 27 % for T. pseudonana and T. weissflogii respectively, with no significant difference between direct versus gradual CO2 elevation treatments. T. pseudonana demonstrated higher intrinsic susceptibility to PSII photoinhibition than T. weissflogii, OA didn’t significantly alter the functional absorption cross-section for PSII photoinactivation in either species. Notably, OA decreased PSII repair rates in T. pseudonana, while T. weissflogii maintained repair capacity through increased PsbA content and sustained non-photochemical quenching. These findings suggest T. weissflogii may gain a competitive advantage in future acidified, light-variable oceans due to its enhanced photoprotection and PSII repair capacity, highlighting species-specific resilience to combined environmental stresses.
Continue reading ‘CO2 rise modulates the physiological performance of the diatoms Thalassiosira pseudonana and Thalassiosira weissflogii to light challenge’
