Discarded plastics are accumulating in the global ocean and posing threat to marine life. The plastisphere – the community colonizing plastic surfaces – profoundly influences plastic’s environmental behavior, affecting its degradation and entry into marine food webs. Ocean acidification (OA) resulted from anthropogenic CO2 emissions, is also threatening marine ecosystems, but the effect of OA on the structure and ecological function of the plastisphere community remains poorly understood. Here, using a mesocosm experiment, we investigated the effects of OA on the plastisphere colonizing floating PET plastic bottles. The study was conducted using subtropical eutrophic coastal water from Southern China under two CO2 conditions: increased CO2 to 1000 μatm (HC) and ambient CO2 410 μatm (LC). Metagenomic sequencing of the plastic samples, after exposure for 32 days, showed striking changes in relative abundance of eukaryotes and bacteria caused by HC. There was a 75.3 % decrease in eukaryote read abundances at high CO2, most strikingly a 95.6% decrease in the relative abundance of diatoms. In addition, the relative abundance of genes involved in photosystem II light reactions and pigment synthesis decreased under high CO2 conditions. This suggests that OA could reduce the photosynthetic potential within the plastisphere. Shifts in plastisphere community structure and potentially diminished photosynthesis under OA could influence the food chains within plastisphere, plastic degradation, transportation, and carbon cycle involving plastics. Overall, our results suggest that OA can alter the functional ecology of the plastisphere, with potential implications for marine biogeochemical processes and food web dynamics in subtropical eutrophic coastal water.
Continue reading ‘Ocean acidification reduces diatom and photosynthetic gene abundance on plastic in an coastal bay mesocosm experiment’Ocean acidification reduces diatom and photosynthetic gene abundance on plastic in an coastal bay mesocosm experiment
Published 25 February 2026 Science Leave a CommentTags: abundance, biological response, BRcommunity, community composition, laboratory, mesocosms, molecular biology, North Pacific, otherprocess, phytoplankton, prokaryotes
Ocean acidification modifies site fidelity and patterns of seagrass habitat use by a herbivorous fish
Published 25 February 2026 Science Leave a CommentTags: algae, biological response, BRcommunity, field, fish, Mediterranean, morphology, performance, physiology, vents
Ocean acidification (OA), characterized by changes in seawater chemistry and a concomitant decline of pH due to the uptake by seawater of the atmospheric CO2, will profoundly shape marine ecosystems. The lower pH/higher pCO2 can act negatively (as a stressor for organisms with a calcareous exoskeleton) or positively (as a direct resource for primary producers like macrophytes). Consequently, herbivores may indirectly benefit from OA counteracting the direct negative effects of living under high pCO2/low pH conditions. Here, we investigated how OA may influence site fidelity, habitat use, and trophic behaviour patterns of Sarpa salpa, the main herbivorous fish associated with Posidonia oceanica meadows in the north-western Mediterranean Sea. We assessed if and how OA influences the habitat use of S. salpa by comparing natural tags, in otoliths and muscle tissues, between CO2 vents and reference pH sites. We did not find differences in otolith elemental composition and shape among fish exposed to different pH conditions (CO2 vent vs ambient pH sites). However, otolith isotopic signatures differed between life stages (young vs sub-adults), consistent with the variations observed in seawater-dissolved inorganic carbon across sites. Finally, comparisons of the nutritional value marine vegetation (macroalgae, P. oceanica, epiphytes) showed that P. oceanica and epiphytes were more nutritious at CO2 vents, along with increased consumption by S. salpa. This trophic separation indicates that S. salpa spent more time exploiting the trophic resources in the CO2 vents. Together, our findings shed new light on plant–herbivore interactions within P. oceanica meadows under future OA scenarios.
Continue reading ‘Ocean acidification modifies site fidelity and patterns of seagrass habitat use by a herbivorous fish’Climate change impacts on coral reefs and emerging resilience pathways: a systematic review
Published 25 February 2026 Science Leave a CommentTags: biological response, corals, review
Highlights
- Rising temperatures, acidification, sea level rise and storms are accelerating coral bleaching and reef weakening worldwide.
- Review of 220 studies from 1996–2025 reveals major biodiversity loss and high risk of reef collapse under warming.
- The 2023–2025 global bleaching event impacted about 84 percent of reefs, the most severe on record.
- Coral gardening, larval restoration, assisted evolution and connected marine protected areas boost reef resilience.
- Emission cuts combined with local conservation, community stewardship and adaptive management are vital for reef survival.
Abstract
Coral reefs are one of the ecosystems that are most affected by climate change, but they also support biodiversity, coastal stability, fisheries, and tourism around the world. This review uses a structured narrative literature review based on PRISMA protocols to put together evidence from 220 peer-reviewed articles (1996 to 2025) to see how warming seas, ocean acidification, rising sea levels, and stronger storms change coral ecology, structure, and ecosystem functioning. The results indicate that heightened thermal stress is the principal catalyst of mass bleaching and mortality, occurring with greater frequency and at larger spatial scales, whereas ongoing acidification persists in diminishing calcification, skeletal density, and recruitment success. The rise in sea level and damage caused by storms make habitat loss happen even faster, make reefs less complex, and make communities of reef-associated species less stable. Even though things are going this way, new interventions like coral gardening, larval propagation, assisted evolution, marine protected areas, and community-led co-management show promise for making things more resilient in the face of future climate change. The review emphasizes the necessity of immediate global carbon reduction in conjunction with customized conservation and restoration strategies at the local level. If no strong action is taken, coral reefs may not last long, and the economic security they provide may also go down.
Continue reading ‘Climate change impacts on coral reefs and emerging resilience pathways: a systematic review’Plasticity and adaptation in a changing ocean: a review of research trends and challenges
Published 24 February 2026 Science Leave a CommentTags: adaptation, biological response, otherprocess, review
Climate change and ocean acidification pose significant challenges to both terrestrial and aquatic ecosystems, making it critical to understand species’ vulnerability. Phenotypic plasticity and evolutionary adaptation are key mechanisms enabling organisms to cope with environmental shifts, with marine species appearing particularly susceptible. This semi-quantitative bibliometric review, conducted following PRISMA guidelines, examines research on climate change and ocean acidification impacts on marine organisms, focusing on plasticity and adaptation. We analysed 168 peer-reviewed articles published between 1995 and 2024 from Web of Science and Scopus. Publications remained low until 2013, then increased threefold, peaking in 2019, with the US, Australia, and China leading. Research predominantly addressed marine animals, especially fish, bivalves, and other invertebrates. Most studies focused on plasticity (57%) and examined molecular traits as response variables. Temperature, pH, and their combination were the most studied environmental drivers, whereas salinity and dissolved oxygen received little attention. Conceptual ambiguities in the use of plasticity and adaptation were noted. Our review highlights research gaps and emphasizes the need for integrated studies on plasticity and adaptation to better understand marine species’ vulnerability to climate change and ocean acidification and guide effective conservation and management strategies.
Continue reading ‘Plasticity and adaptation in a changing ocean: a review of research trends and challenges’Understanding the resilient carbon cycle response to the 2014–2015 Blob event in the Gulf of Alaska using a regional ocean biogeochemical model
Published 24 February 2026 Science Leave a CommentTags: chemistry, modeling, North Pacific, regionalmodeling
Marine heatwaves (MHWs), characterized by anomalously high sea surface temperatures, are occurring with increasing frequency and intensity, profoundly impacting ocean circulation, biogeochemistry, and marine ecosystems. The MHW known as the Blob, which persisted in the subarctic NE Pacific from 2014 to 2015, significantly affected surrounding ecosystems. Warming-induced solubility reduction is expected to raise the partial pressure of carbon dioxide (pCO2) in the surface water, causing outgassing of CO2 to the atmosphere. Outgassing of CO2 is another source of atmospheric CO2 in addition to anthropogenic fossil fuel burning. However, moored observations at Ocean Station Papa (OSP; 145° W, 50° N) shows a moderate decrease in oceanic pCO2 during the Blob, resisting the warming-induced outgassing of CO2. This response is opposite of what is expected from warming alone, and instead has been attributed to reductions in dissolved inorganic carbon (DIC), although the mechanisms driving this reduction have remained unclear. We employed a regional model that accurately reproduces the temporal variability of oceanic pCO2 at OSP to investigate the cause of decrease pCO2 during the Blob. The analysis of model outputs indicates that the observed oceanic pCO2 decline resulted from the offset between warming-induced solubility reduction (increasing pCO2) and weakened physical transport of DIC (decreasing pCO2), with the latter dominating. Both horizontal and vertical transports played important roles. The near-surface carbon budget over the broad region was primarily driven by changes in the vertical transport. The decrease in DIC during the Blob resulted from the suppression of upwelling of DIC-rich subsurface waters in the winter of 2013. In this period, the horizontal transport also contributed substantially to DIC reduction. In particular, at OSP, the effect of the horizontal transport was comparable to that of the vertical transport, reflecting the northward advection of low-DIC water masses. These findings indicate that changes in physical circulation were the primary driver of the moderately enhanced CO2 uptake observed during the Blob. This study provides a critical insight into the complexity of biogeochemical response to extreme warming events and underscores the importance of resolving physical transport processes in assessing oceanic carbon uptake during MHWs.
Continue reading ‘Understanding the resilient carbon cycle response to the 2014–2015 Blob event in the Gulf of Alaska using a regional ocean biogeochemical model’Shell-shocked: local oyster farmers confront a changing climate
Published 24 February 2026 Media coverage Leave a CommentTags: fisheries, North Pacific
For more than a century, oyster aquaculture has thrived in Morro Bay’s waters, but our changing climate now poses a significant threat to this multi-million-dollar industry. Local farmers are implementing innovative solutions to protect their operations as ocean acidification becomes an increasing concern.
Beneath the waves in Morro Bay, nearly 5 million oysters are growing. Onshore, the hands of shuckers work quickly to keep up with demand.
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However, changing climate conditions are putting aquaculture at risk. Temperature and pH changes, particularly ocean acidification, are creating new challenges for oyster farmers.
Nick Soares from the Morro Bay National Estuary Program works closely with the farmers in the bay and with the research teams keeping a close eye on the bay. He stated, “Temperature, pH being the big one, like ocean acidification, these are all things that we’re very aware of.”
At Cal Poly’s Center for Coastal and Marine Science, researchers are studying these impacts. In Dr. Emily Bockmon’s research lab, students and professors are documenting how rising atmospheric CO2 levels are affecting seawater chemistry. Learn more about her research here!
Continue reading ‘Shell-shocked: local oyster farmers confront a changing climate’Wind control of the interannual ocean‐biogeochemical variability in the South Atlantic Bight
Published 23 February 2026 Science Leave a CommentTags: biogeochemistry, chemistry, modeling, North Atlantic, regionalmodeling
Abstract
In the South Atlantic Bight (SAB), changes in the Gulf Stream (GS), particularly its strength and proximity to the coast, are thought to be primary factors determining the shelf-break upwelling rate. However, it is still not entirely clear if and to what extent those factors influence cross-shelf nutrient fluxes and shape the ocean biogeochemistry at interannual and longer timescales. Here, we use a high-resolution regional ocean-biogeochemical model and an ocean reanalysis product (1993–2022), along with a satellite-derived chlorophyll data set (1997–2022), to investigate the interannual ocean-biogeochemical variability in the SAB. Regional model outputs suggest that year-to-year changes in phytoplankton production are indeed largely driven by upwelling of cold and nutrient-rich water to the shelf-break. The upwelling variability, reflected in bottom temperature and vertically integrated production patterns, is strongly linked to surface velocity changes in the GS near the shelf break, but weakly related to the depth-integrated GS transport. The GS’s velocity changes, and the temperature and production anomalies, are well correlated to the alongshore wind stress, suggesting that local wind is the leading driver of the shelf-break upwelling variability at interannual timescales. Those relationships are also supported by circulation patterns from ocean reanalysis and satellite chlorophyll anomalies. Finally, examining the simulated shelf-slope interchanges in the carbonate system, we find that shelf-break upwelling significantly increases bottom acidification, a pattern linked to the low carbonate concentration in the slope waters. This study thus provides new insight for understanding and predicting GS and winds impacts on biogeochemical patterns from the SAB.
Plain Language Summary
The ocean current known as the Gulf Stream (GS) can induce upwelling of subsurface cold and nutrient-rich waters into the coastal margin of the South Atlantic Bight, influencing coastal temperature and phytoplankton growth. Previous studies suggested that the GS strength and its proximity to the coast are key factors determining the intensity of upwelling events. However, the degree to which these factors impact the year-to-year changes in phytoplankton production and other ocean properties remains unclear. Here we use numerical models of ocean currents and seawater biogeochemistry, as well as chlorophyll records derived from satellite measurements, to investigate that impact. The patterns showed that interannual changes in coastal temperature, phytoplankton production, water acidity, and dissolved oxygen are strongly modulated by upwelling changes in the outer edge of the continental margin (about 70 m depth in this region). This interannual upwelling variability is tightly coupled to variations in the surface alongshore GS velocity close to that outer edge, which is modulated by alongshore wind variability. Our study characterizes GS patterns associated with high and low productivity years, and highlights the role of surface wind as ultimate driver of the interannual upwelling variability in the South Atlantic Bight.
Key Points
- A regional ocean model is used to investigate interannual variability of ocean-biogeochemistry in the South Atlantic Bight
- Year-to-year changes in primary production, chlorophyll, and carbonate system patterns respond to shelf-break upwelling anomalies
- Shelf-break upwelling is closely linked to the Gulf Stream velocity near the shelf break, modulated by alongshore wind variability
Ocean acidification in Canada: the current state of knowledge and pathways for action
Published 23 February 2026 Science Leave a CommentTags: biological response, chemistry, modeling, policy, regionalmodeling, review, socio-economy
Ocean acidification (OA) generally receives far less consideration than other climate stressors and related hazards, such as global warming and extreme weather events. Canada is uniquely vulnerable to OA given its extensive coastal oceans, the oceanographic processes in its three basins, accelerated warming and sea-ice melt, and extensive coastal communities and maritime economic sectors. Canada’s coastline is also home to extensive and diverse First Nations peoples with distinct histories, rights, title, laws, governance and whose traditions and cultures are extrinsically linked to the sea. However, there are currently very limited pathways to support OA action, mitigation, and/or adaptation in Canada, particularly at the policy level. Here, we present a first synthesis of the current state of OA knowledge across Canada’s Pacific, Arctic, and Atlantic regions, including monitoring, modelling, biological responses, socioeconomic and policy perspectives, and examples of existing OA actions and efforts at local and provincial levels. We also suggest a step-wise pathway for actions to enhance the coordinated filling of OA knowledge gaps and integration of OA knowledge into decision-making frameworks. The goals of these recommendations are to improve our ability to respond to OA in Canada, and minimize risks to coastal marine environments and ecosystems, vulnerable sectors, and communities.
Continue reading ‘Ocean acidification in Canada: the current state of knowledge and pathways for action’Pacific cod gene expression analysis reveals how changing oceans impact larvae
Published 20 February 2026 Press releases Leave a CommentTags: biological response, fish, molecular biology, multiple factors, North Pacific, temperature
A new study used gene expression analysis to explore how temperature and ocean acidification affect Pacific cod larvae. Scientists discovered that larvae are equipped with genes that allow them to survive cool and acidified conditions. However, warming may cause mortality by depleting energy and triggering inflammatory responses. These mechanisms are possible links between changes in ocean conditions and the recruitment of young fish in the Gulf of Alaska Pacific cod population.
Decrease in Pacific Cod Population
Pacific cod is a highly valued commercial fishery, and cod also play a key role in the ecosystem as both predator and prey. However, cod populations in Alaska have declined in recent years. Decreased population size is likely linked to recent marine heat waves, and early life stages seem to be the most impacted. Scientists predict that marine heatwaves may be more common in the future and that ocean acidification will intensify, particularly at high latitudes.
Experiments have shown that Pacific cod are sensitive to temperature during their early life stages. Temperature influences how their eggs develop, how their bodies use energy, and how they grow and survive as larvae. We don’t know as much about the impacts of ocean acidification.
In a 2024 study at the NOAA Fisheries Alaska Fisheries Science Center, scientists raised Pacific cod from embryos to larvae at multiple temperatures (3°C, 6°C, 10°C). To examine the potential interaction between temperature and ocean acidification, they also raised them in water that replicated current ocean conditions and in more acidified conditions. This mimicked conditions projected for the end of this century. The study found that larval mortality was very high in warm water but the effect of acidification was more complex.
The effects of temperature and acidified conditions depended on the fish’s development stage. Scientists need to better understand how changing ocean conditions can affect important species like Pacific cod, and whether these species can adapt to these changes.
A Deeper Dive with Gene Expression
This new molecular study examined larvae to understand why heat wave temperatures might cause larvae to die at high rates. “Finding larvae that are dying in the field is very unlikely, but we were able to sample experimental larvae that we knew were dying rapidly due to warming,” said Emily Slesinger, researcher at NOAA’s Alaska Fisheries Science Center. They also sampled larvae exposed to other conditions. The experiments simulated more acidified water and colder temperatures which Pacific cod larvae currently experience in some regions and years. Slesinger continues, “The unique thing about this study’s approach is to look beyond whether these larvae live or die under different conditions, but to understand why through gene expression analysis.”
Continue reading ‘Pacific cod gene expression analysis reveals how changing oceans impact larvae’Blue carbon ecosystems and coral reefs as coupled nature-based climate solutions
Published 20 February 2026 Science Leave a CommentTags: mitigation, review
Restoring coastal ecosystems offers more than just carbon storage: it can also help bring coral reefs back to life. This Perspective explores how the carbon captured by mangroves and other blue carbon systems could be used to support reef restoration, creating a powerful synergy between climate action and marine conservation. By aligning ecological benefits with innovative funding strategies, this approach offers a practical path towards more resilient coastlines and more durable climate solutions.
Continue reading ‘Blue carbon ecosystems and coral reefs as coupled nature-based climate solutions’Short-term mechanisms, long-term consequences: molecular effects of ocean acidification on juvenile snow crab
Published 20 February 2026 Science Leave a CommentTags: adaptation, biological response, crustaceans, laboratory, molecular biology, morphology, mortality, North Pacific, otherprocess, physiology, reproduction
Understanding how marine species tolerate acidified conditions is critical for predicting biological responses to ocean change. A recent one-year experiment (Long 2026) found that juvenile snow crab (Chionoecetes opilio) maintain growth and molting under acidification (pH 7.8, 7.5), and survival begins to decline only after ∼250 days under severe acidification (pH 7.5). In this companion study, we characterized whole-transcriptome responses after 8 hours and 88 days of exposure to identify molecular mechanisms underlying short-term tolerance and chronic effects of ocean acidification. The immediate transcriptional response involved strong activation of genes associated with mitochondrial metabolism and biogenesis, protein homeostasis, cuticle maintenance, and immune modulation, processes shared between moderate and severe treatments but of greater magnitude under severe acidification. After 88 days, expression patterns diverged, revealing sustained upregulation of stress- and damage-mitigation pathways in the severe treatment (pH 7.5) compared to the moderate treatment (pH 7.8). These findings indicate that crabs in severe acidification are likely to experience chronic OA stress that precedes outward physiological effects, and provides a mechanistic basis for delayed mortality. We further highlight potential early indicators of chronic acidification stress in snow crab, among which a gene likely coding for carbonic anhydrase 7 (CA7, GWK47_031192) appears to be the most promising biomarker.
Continue reading ‘Short-term mechanisms, long-term consequences: molecular effects of ocean acidification on juvenile snow crab’Indo-Pacific coral reef sponge diversity declines under predicted future ocean conditions
Published 19 February 2026 Science Leave a CommentTags: abundance, biological response, BRcommunity, community composition, corals, laboratory, mesocosms, multiple factors, North Pacific, otherprocess, porifera, temperature
Future oceans are predicted to favor groups like sponges over calcifying taxa such as scleractinian corals. Here, we test this hypothesis by examining the development of coral reef communities in experimental mesocosms over 23 months. 85 sponge species among the calcifying class Calcarea (~33%), and non-calcifying Demospongiae (~60%) and Homoscleromorpha (<10%) recruited to warming (+2°C), acidification (-0.2 pH), and warming+acidification (+2°C, -0.2 pH) future ocean treatments. The diversity of calcifying sponges was unimpacted across any treatment, whereas non-calcifying classes showed greatest declines. 57-66% of demosponges decreased under future ocean conditions, and homoscleromorphs were entirely absent from acidified treatments. Through the sponge loop, sponges play a fundamental role in coral reef nutrient cycling, and altered coral reef community composition likely has functional consequences. This study challenges the assumption that non-calcifying species are less impacted and highlights the importance of understanding how community composition may alter ecosystem functioning under future ocean conditions.
Continue reading ‘Indo-Pacific coral reef sponge diversity declines under predicted future ocean conditions’Metrological assessment of pHT in TRIS buffers within artificial seawater: implications for high-salinity reference materials
Published 19 February 2026 Science Leave a CommentTags: chemistry, methods
Anthropogenic CO2 emissions drive ocean acidification through changes in the carbonate system, lowering seawater pH. In contrast, salinity variations arise from physical processes such as freshwater fluxes and circulation. This study reports the preparation and Harned cell characterization of three equimolal TRIS buffer solutions (0.01 mol·kg−1, 0.025 mol·kg−1, and 0.04 mol·kg−1) in artificial seawater (ASW) matrices with practical salinities of 35 and 50 and temperatures of 20 °C, 25 °C, and 30 °C. Determined pHT values achieved expanded uncertainties (𝑈pHT ≤ 0.006), meeting Global Ocean Acidification Observing Network (GOA-ON) “climate” quality standards. Absolute salinity (SA) was concurrently measured via density (TEOS-10), revealing systematic deviations from practical salinity due to TRIS content. A nonlinear regression model was developed to predict pHT as a function of salinity, temperature, and TRIS molality, with r2 = 0.99998. These results provide a robust dataset for developing Certified Reference Materials (CRMs) for pHT calibration under climate-relevant high-salinity environments at different temperature conditions, offering a practical tool for high-accuracy calibration in variable marine conditions.
Continue reading ‘Metrological assessment of pHT in TRIS buffers within artificial seawater: implications for high-salinity reference materials’Molecular indicators of warming and other climate stressors in larval Pacific cod
Published 19 February 2026 Science Leave a CommentTags: biological response, fish, molecular biology, morphology, multiple factors, North Pacific, reproduction, temperature
Recent marine heatwaves in the Gulf of Alaska negatively impacted Pacific cod (Gadus macrocephalus) through a series of failed year classes and poor recruitment to the fishery. Experimental work by Slesinger et al. (2024) corroborated the hypothesis that warming directly impacts recruitment by increasing larval mortality rates. In this companion study, we applied transcriptomics with larvae from Slesinger et al. (2024) to better understand how warming affected their physiology and identify potential mechanisms contributing to mortality. RNASeq data reveal that warm-exposed larvae have unique gene expression profiles that may reflect high levels of inflammation, lipid dysregulation or depletion, and altered development of visual systems and neurological pathways. Warming may therefore cause a metabolic mismatch whereby energy-demanding activities (development, inflammation, growth) exceed energy production capacity despite access to prey. We also report the less pronounced transcriptional differences in larvae exposed to cold, acidification, and a combination of stressors reflecting future climate scenarios. This information will guide future genetic and experimental work that will ultimately inform recruitment forecasts in years with conditions similar to those tested here.
Continue reading ‘Molecular indicators of warming and other climate stressors in larval Pacific cod’Experimental observations on ultrastructure of scales of red seabream (Pagrosomus major) for seawater pH monitoring
Published 18 February 2026 Science Leave a CommentTags: biological response, dissolution, fish, laboratory, morphology, North Pacific
Ocean acidification monitoring relies predominantly on field test and numerical modeling, while bioindicators are emerging as practical and economic approaches for seawater pH monitoring. Here, we report indoor dissolution experiments on the scale of red seabream (Pagrosomus major) under varied pH (from 7.1 to 7.9), showing that the mean aspect ratio of ventral ctenii and caudal/ventral lepidonts negatively correlated with pH. We propose to employ these ultrastructures of fish scale to be a novel bioindicator for marine pH reconstruction. This semiquantitative proxy would be applicable to both contemporary biomonitoring and paleo-oceanic pH reconstruction for the extensive occurrences of fish in modern oceans and fossil records.
Continue reading ‘Experimental observations on ultrastructure of scales of red seabream (Pagrosomus major) for seawater pH monitoring’Population-level transcriptomic datasets from two benthic invertebrates exposed to long-term experimental warming and acidification
Published 18 February 2026 Science Leave a CommentTags: biological response, laboratory, Mediterranean, molecular biology, mollusks, multiple factors, porifera, temperature
Ocean warming and acidification are major drivers of change in marine ecosystems, with particularly strong impacts on low-mobility benthic organisms. Despite their ecological importance, genomic and transcriptomic resources for sponges (Phylum: Porifera) and marine gastropods (Phylum Mollusca) that capture responses to long-term, combined climate stressors and population-level variability remain limited. Herein, we present population-level RNA-seq datasets from the sponge Chondrilla nucula and the gastropod Hexaplex trunculus, collected from northern and southern Aegean Sea (Eastern Mediterranean) populations and exposed for three months to elevated temperature and reduced pH in a common garden experiment simulating near-future climate change conditions. The datasets comprise high-quality paired-end Illumina reads, a complete de novo transcriptome assembly for C. nucula, and genome-guided alignments for H. trunculus. These datasets provide a valuable resource for investigating transcriptional plasticity and climate change resilience in benthic marine invertebrates.
Continue reading ‘Population-level transcriptomic datasets from two benthic invertebrates exposed to long-term experimental warming and acidification’A biogeochemical perspective on acidification and buffering capacity in the Piscataqua Estuary
Published 18 February 2026 Science Leave a CommentTags: biogeochemistry, chemistry, field, laboratory, North Atlantic, sediment
Coastal acidification is influenced not only by rising atmospheric CO2 and river-ocean mixing, but also by metabolic processes that alter seawater carbonate chemistry and buffering capacity. This study examines how sedimentary biogeochemical processes contribute to carbonate system variability in the Piscataqua Estuary, a tidally dynamic channel connecting Great Bay to the Gulf of Maine. The biogeochemical processes considered include sedimentary aerobic respiration, denitrification, sulfate reduction, and carbonate dissolution or precipitation. Two incubation experiments were conducted in September and October of 2024 at the University of New Hampshire’s Coastal Marine Laboratory (CML) to quantify changes in pH, dissolved inorganic carbon (DIC), and total alkalinity (TA) in the overlying water arising from sediment-water biogeochemical exchange. Sediment cores were collected to be paired with overlying water from slack low and slack high tides during each month. Across both experiments, sediment cores consistently exhibited greater acidification and larger shifts in DIC and TA concentrations compared to water-only cores, indicating strong sedimentary biogeochemical influence. Among the processes considered, sulfate reduction is likely the most influential driver of carbonate system variability, contributing to increases in both DIC and TA. Linking experimental results to in-situ measurements at CML revealed that variability observed over individual ebb or flood tides primarily reflected processes associated with tidal advection (ie, river-ocean mixing and water-column biogeochemical activity). However, when evaluating net changes over both tidal transitions (ebb and flood), contributions from sedimentary biogeochemical processes were comparable in magnitude to those of the other processes during September and October. Sedimentary biogeochemical processes also appear to exert more consistent contributions to DIC and TA than water-column biogeochemical processes. Together, these findings demonstrate that sedimentary biogeochemical processes play a major role in regulating carbonate system variability in the Piscataqua Estuary. This study underscores the importance of examining carbonate system variability across multiple timescales to obtain a more comprehensive understanding of estuarine carbonate dynamics. Additional experimental work is needed to further resolve the influence of metabolic processes on coastal carbonate systems under changing environmental conditions.
Continue reading ‘A biogeochemical perspective on acidification and buffering capacity in the Piscataqua Estuary’Shrinking shellfish? Risk of acidic water in the Indian River Lagoon
Published 17 February 2026 Press releases Leave a CommentTags: chemistry, North Atlantic
FAU researchers measured aragonite saturation – a key indicator of water’s ability to support calcifying organisms like clams and oysters – throughout the Indian River Lagoon.
Florida’s Indian River Lagoon (IRL), one of the state’s most ecologically productive estuaries, is facing a growing but invisible threat that could reshape its marine ecosystems. Over the past decade, the lagoon has suffered severe degradation caused by nutrient pollution, excessive freshwater runoff, harmful algal blooms (HABs), and declining water quality. These changes have led to the loss of tens of thousands of acres of seagrass and have negatively impacted shellfish, fish, dolphins, manatees and other key species.
A new study from Florida Atlantic University’s Harbor Branch Oceanographic Institute now reveals that these pressures are also contributing to coastal acidification, a chemical shift in the water that threatens the ability of shell-building marine organisms to grow and thrive.
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To understand these changes, FAU Harbor Branch researchers studied the IRL from 2016 to 2017, measuring Ωarag and other water chemistry factors. They examined how nutrients, freshwater inputs, and other environmental conditions affect the lagoon’s ability to support shell-building marine life.
The study used two approaches. First, researchers conducted a broad survey across the lagoon, from nutrient-rich northern areas to southern regions affected by freshwater inflows. Second, they did weekly sampling at three central sites with different salinity and land-use conditions: an urban-influenced canal, a river mouth affected by urban and agricultural runoff, and a relatively natural reference site with strong ocean exchange.
Results of the study, published in the journal Marine Pollution Bulletin, revealed clear patterns. Northern sites with high nutrient concentrations and frequent HABs had lower aragonite saturation. Southern sites, influenced by freshwater discharges, also had lower Ωarag, primarily due to reduced salinity and dilution of aragonite. In the weekly surveys, Ωarag was positively correlated with salinity and negatively correlated with nutrient levels, confirming that both freshwater input and nutrient pollution play a role in controlling water chemistry.
Continue reading ‘Shrinking shellfish? Risk of acidic water in the Indian River Lagoon’The silent shift: how ocean acidification and rising temperature affect marine organisms
Published 17 February 2026 Science Leave a CommentTags: biological response, review
The increased absorption of carbon dioxide from the atmosphere is the cause of ocean acidification. This has an adverse effect on marine calcifiers such as corals and shelled mollusks by lowering ocean pH and altering carbonate chemistry. Global warming-induced increases in ocean temperatures have serious repercussions for marine life as well, upsetting food webs, changing species ranges, and compromising physiological functions. The early life stages of shelled mollusks, such as gastropods and bivalves, are the most susceptible to the effects of ocean acidification. The growth, shell production, and survival of both juvenile and adult mollusks can be adversely affected by ocean acidification. The nutritional value of phytoplankton, the foundation of the marine food chain, may be impacted by ocean acidification. This may limit zooplankton’s ability to develop and reproduce, and higher trophic levels. The detrimental effects on marine ecosystems can be intensified by the interaction of ocean acidification, heat, deoxygenation, eutrophication, and pollution. Marine resources like fisheries and aquaculture are seriously threatened by ocean acidification and climate change, which might have negative social and economic effects. Reducing CO2 emissions, preserving and repairing marine habitats, and putting sustainable resource management techniques into practice are some ways to deal with these problems.
Continue reading ‘The silent shift: how ocean acidification and rising temperature affect marine organisms’Linking surface pCO2 variability to physical processes along a continental shelf–ocean transect in the southwestern Atlantic Ocean during austral autumn and winter
Published 17 February 2026 Science Leave a CommentTags: chemistry, field, South Atlantic
The southwestern South Atlantic Ocean is an important global sink of atmospheric carbon dioxide (CO2), driven by increased primary productivity in a nearby region where oligotrophic warm currents converge with nutrient-rich cold waters. However, uncertainties remain regarding CO2 dynamics and the role of physical processes in CO2 uptake across this region. Here, we assess variations in surface partial pressure of CO2 (pCO2) and air–sea CO2 fluxes in the Southwest Atlantic, along a transect from the continental shelf to the open ocean at 34.5°S during austral autumn 2018 and winter 2019. High-resolution spatial measurements of the temperature, salinity, and molar fraction of surface CO2 were conducted. In autumn 2018, the shelf region acted as a source of CO2 to the atmosphere (median of 3.2 mmol CO2 m-2 d-1), which was partially offset by a sink (median of –2.5 mmol CO2 m-2 d-1) in the open ocean. In contrast, the entire transect in winter 2019 presented median CO2 emissions of ~1.5 mmol CO2 m-2 d-1, which differs from climatological estimates. The spatial and seasonal variations in surface ocean pCO2 were linked to variable hydrodynamic processes, including water masses and mesoscale structures. Our findings reveal that, in one of the most productive oceanic waters worldwide, pCO2 may be influenced by distinct continental inputs (e.g., rivers, runoff, and groundwater discharge) and water masses (e.g., Tropical Water, Plata Plume Water and Subtropical Shelf Water). Therefore, the local hydrodynamic processes can modulate high spatial and seasonal variability in CO2 exchange at the ocean–atmosphere interface, with potential implications for regional and global carbon budgets. General results, such as climatological, cannot fully capture the influence of regional upwelling and continental water input, which highlights the importance of high-resolution regional observations.
Continue reading ‘Linking surface pCO2 variability to physical processes along a continental shelf–ocean transect in the southwestern Atlantic Ocean during austral autumn and winter’
