Coastal acidification, distinct from ocean acidification, is influenced by localized factors such as nutrient runoff, freshwater input, and decomposition. This study estimates carbonate system parameters in the Western Mississippi Sound (WMS) using integrated uncrewed aircraft systems (UAS) and autonomous surface vessel (ASV) observations. During 2018 to 2022, high-ressolution UAS imagery and in 2021 in situ ASV data including pH, pCO2, SST, SSS, CDOM, and Chl-a were collected. Machine learning algorithms were developed to estimate pCO2 and total alkalinity (TA), with random forest models achieving high accuracy (R2 > 0.91). A CDOM-based model was developed to derive SSS, which, along with Chl-a, fed into time-series mapping of TA and pCO2. Results highlight the effectiveness of combining UAS and ASV data to produce fine-scale carbonate system maps. This approach supports improved monitoring of coastal acidification and can be extended to estimate additional parameters such as calcite and aragonite saturation states and DIC.
Continue reading ‘High-resolution mapping of carbonate system parameters over coastal waters using integrated uncrewed aircraft systems (UAS) and Autonomous Surface Vessel (ASV) observations’Posts Tagged 'field'
High-resolution mapping of carbonate system parameters over coastal waters using integrated uncrewed aircraft systems (UAS) and Autonomous Surface Vessel (ASV) observations
Published 7 September 2026 Science Leave a CommentTags: chemistry, field, modeling, North Atlantic, regionalmodeling
Air–sea CO2 exchange in the Southern Adriatic Sea: assessing its role as a moderate carbon sink over the last decade (2015–2024)
Published 7 September 2026 Science Leave a CommentTags: chemistry, field, Mediterranean
Coastal waters contribute significantly to the total oceanic carbon uptake. In this context, the cumulative influence exerted by marginal seas may be conspicuous. However sparse and unevenly distributed observations in such regions pose a serious limit to an accurate, experimentally based quantification of carbon dynamics. The Southern Adriatic (SAd) is one of the key sites of the Mediterranean Sea where open-ocean deep water formation occurs, a process recognized as a major driver of carbon sequestration. However, observations in this region remained sparse, thus quantitative assessment of surface carbon dynamics and air-sea carbon flux are still limited. In this study, a recently validated, decade-long (2015–2024) high-resolution time series of surface partial pressure of CO2 (pCO2 sw) and hydrographic measurements collected at the EMSO-E2M3A South Adriatic observatory, located at the centre of the Southern Adriatic Pit, has been analysed. The results showed that seasonal temperature variability and winter vertical mixing were the dominant drivers of pCO2 sw variability, with biological processes likely contributing during the post-convective period. Air–sea CO2 flux (FCO2), derived from in situ observations, indicated a clear seasonal pattern, with the SAd acting as a CO2 sink during winter and as a source during summer. Importantly, the results revealed that the SAd acted as a weak-to-moderate annual carbon sink over the last decade. However, the magnitude of FCO2 was strongly influenced by the selected gas transfer velocity parametrization. Similarly, the use of a different wind speed input, for instance ERA5 reanalysis, also altered the estimated CO2 flux, highlighting the importance of carefully selecting wind products for regional air-sea FCO2 calculations. Finally, the results presented here showed how time series such as the SAd dataset can serve as critical assets for validating operational ocean models, such as the European Copernicus Marine Service for the Mediterranean, by helping to identify discrepancies in the simulation of key processes.
Continue reading ‘Air–sea CO2 exchange in the Southern Adriatic Sea: assessing its role as a moderate carbon sink over the last decade (2015–2024)’Distributions and controls of carbonate parameters in offshore oil and gas fields of the Beibu Gulf and adjacent northern South China Sea (nSCS) shelf during the fall season
Published 4 September 2026 Science Leave a CommentTags: chemistry, field, North Pacific
Considering the strong seasonality in carbonate system parameters in coastal ecosystems, a comprehensive understanding of seasonal carbonate cycling is critically important for deploying scalable, nature-based negative emission technologies. Located in the northern South China Sea (nSCS), the Beibu Gulf is a semi-enclosed bay hydrodynamically connected to the nSCS shelf. Previous studies have documented carbonate dynamics in the Beibu Gulf during spring and summer; however, the spatial distributions and controlling mechanisms in fall remain unreported, as do comparative assessments with the adjacent nSCS shelf. Here, we present observations of the carbonate system in the Beibu Gulf and the adjacent nSCS shelf from a fall cruise conducted in 2024. Our results reveal that both the nSCS shelf and the Beibu Gulf act as CO2 sources with air-sea CO2 fluxes ranging from 0.4 to 1.6 mmol m−2 d−1. Although sea surface temperature exerts the dominant control on pCO2 variability, biogeochemical processes within the Beibu Gulf further elevate surface pCO2 by ∼20 μatm. In the water column, the spatial distributions of carbonate system parameters are primarily governed by the intrusion of SCS water and Kuroshio water. Notably, we report, for the first time, elevated dissolved inorganic carbon (DIC) and total alkalinity (TA) concentrations relative to background SCS water in certain bottom waters in Dongfang and Ledong within the Beibu Gulf, with increases of 94 ± 9 μmol kg−1 and 57 ± 3 μmol kg−1, respectively. Associated with these DIC and TA enhancements, we observed a concomitant increase in pCO2 of ∼92 μatm, alongside decreases in pH and aragonite saturation state (Ωarag) of 0.08 and 0.34 units, respectively. Qualitative analysis suggests that these DIC and TA additions likely originate from coupled CaCO3 dissolution and organic matter respiration, processes consistent with influences from submarine groundwater discharge (SGD) and/or sediment porewater release. However, these interpretations require further quantification and tracer-based validation.
Continue reading ‘Distributions and controls of carbonate parameters in offshore oil and gas fields of the Beibu Gulf and adjacent northern South China Sea (nSCS) shelf during the fall season’The Global Ocean Data Analysis Project version 3 (GLODAPv3) – an internally consistent biogeochemical data product for the world ocean
Published 1 September 2026 Science Leave a CommentTags: chemistry, field
The Global Ocean Data Analysis Project (GLODAP) is a synthesis effort providing surface-to-bottom ocean biogeochemical observations determined through chemical analysis of discrete bottle samples, with an emphasis on seawater inorganic carbon chemistry and related variables. Version 3 of GLODAP comprises data from 1181 cruises, spanning more than 50 years of observations (1972–2023). It includes all data from the previous GLODAPv2.2023 (Lauvset et al., 2024) together with newly added data from 57 cruises. For all cruises, 13 core variables (temperature, salinity, oxygen, nitrate, silicate, phosphate, dissolved inorganic carbon, total alkalinity, CFC-11, CFC-12, CFC-113, CCl₄, and SF6) have undergone extensive quality control with particular focus on the identification and removal of systematic differences between cruises. The data are available in two formats: (i) as submitted by the data originators, converted to World Ocean Circulation Experiment (WOCE) exchange format, and (ii) as a merged data product in which adjustments have been applied. These adjustments were determined using crossover analyses in combination with a newly developed global inversion method, the furthest-first routine. The applied adjustments are intended to remove systematic differences arising from differences in measurement methods, calibration, and/or data-handling practices, while preserving known or likely temporal trends and natural variability. The consistency of the adjusted data product is estimated to be 0.0013 for salinity, 0.7 % for oxygen, 0.4 % for nitrate, 0.5 % for silicate, 0.5 % for phosphate, 1.2 µmol kg⁻¹ for dissolved inorganic carbon, and 1.4 µmol kg⁻¹ for total alkalinity. Consistency estimates could not be derived for transient tracers, but they are believed to be consistent to better than 5 % (10 % for SF₆). The enhanced consistency enables different datasets to be used together with greater confidence. Newly introduced cruise-specific uncertainty estimates for all core variables provide more granular quantifications of remaining cruise-to-cruise inconsistencies. Additional variables, including pH, discrete CO₂ fugacity (fCO₂), isotopic tracers, and others, were not subjected to secondary quality control but are included in the data product.
The original data, their documentation (metadata), and DOIs are available through the Ocean Carbon and Acidification Data System (OCADS) of NOAA’s National Centers for Environmental Information (NCEI), which also hosts the merged data product. All secondary quality control decisions and supporting information can be found in the online adjustment table (https://glodapv3.geomar.de, last accesses 26.06.2026). The product is distributed as a single global file and as four regional subsets (Arctic, Atlantic, Indian, and Pacific Oceans) under https://doi.org/10.25921/m6tp-mj50 (Lange et al., 2026). These adjusted files also include ancillary and approximated data obtained through interpolation or calculation from measured data.
Continue reading ‘The Global Ocean Data Analysis Project version 3 (GLODAPv3) – an internally consistent biogeochemical data product for the world ocean’Coral reef community structure and photophysiology differ between upwelling and non-upwelling locations on the Pacific Coast of Costa Rica
Published 28 August 2026 Science Leave a CommentTags: biological response, community composition, corals, echinoderms, field, North Pacific, otherprocess, photosynthesis, physiology
Reef-building corals and coralline algae form the calcium carbonate frameworks that underpin tropical coral reefs, yet in some locations, coral cover has declined by ~50% in recent decades due to marine heatwaves and other stressors. Identifying refugia environments, such as upwelling systems, that may buffer stress, promote recovery, and could enhance resilience by promoting physiological plasticity that supports thermotolerance is therefore critical. Here, we compared benthic community composition, coral percent cover, and photophysiology between an upwelling location in the Gulf of Papagayo and a non-upwelling location in Sámara on the Pacific coast of Costa Rica. Waters in Papagayo were cooler, more acidic, and had higher chlorophyll-a concentrations. Reefs at this location exhibited higher crustose coralline algae, higher sea urchin abundance, and lower macroalgae cover, compared to Sámara. Papagayo also showed higher stony coral cover, driven by Pocillopora spp., while Sámara was dominated by massive, heat-tolerant Porites spp. Photophysiological parameters were significantly different between locations. Specifically, photosynthetic efficiency (Fv′/Fm′) was 10–45% higher, and maximum photosynthetic rate (Pmax) was 20–40% lower in corals from Papagayo than in those from Sámara. These results reveal that two locations differing in environmental regime within a relatively small geographic area also differ in coral community composition and photophysiological features. Although further research is needed to resolve whether these environmental contrasts shape the observed biological differences, the observed patterns are consistent with the hypothesis that such regimes may support reef persistence or refugia, providing a basis for future work to test this hypothesis directly.
Continue reading ‘Coral reef community structure and photophysiology differ between upwelling and non-upwelling locations on the Pacific Coast of Costa Rica’Aragonite saturation horizon variability along North Pacific seamounts and implications for deep-sea coral reefs
Published 27 August 2026 Science Leave a CommentTags: biogeochemistry, chemistry, field, North Pacific
The 2014 discovery of living deep-sea coral reefs along the Northwest Hawaiian Islands (NWHI) and lower Emperor Seamount Chain (ESC), despite the North Pacific’s shallow aragonite saturation horizon (ASH) and high CaCO3 dissolution rates, underscores the need to understand the local seawater chemistry where these reefs persist. We investigated seawater carbonate chemistry using discrete samples along NWHI and ESC from two cruises ∼1 year apart (08/26/21–09/26/21, 09/09/22–10/24/22). Across the two cruises, ASH depth difference ranged from 15 to 77 m. Since the Pacific ASH shoals by 1–2 m yr−1, this long-term trend cannot explain the magnitude of ASH change observed. Potential contributions from anthropogenic CO2 and examining intermediate water mass changes from temperature-salinity plots did not provide an explanation for the observed changes. Instead, ASH depth variability was primarily governed by localized biogeochemical processes, namely changes in intermediate water respiration and CaCO3 dissolution. Indicators for dissolution (TA*) and respiration (AOU) suggest changes in ASH depth were driven by changes in dissolution at the northern- and southern-most sites, whereas respiration exerted stronger control at central sites. Combining 2021 and 2022 data with data from 2014 to 2019 revealed high interannual ASH variability, by as much as >200 m. Deep-sea coral reefs across the NWHI and ESC currently reside close to the ASH depth and likely experience interannual shifts between under- and supersaturation. As ocean acidification induced shoaling occurs alongside these interannual fluctuations, the frequency of undersaturation will be an important consideration for deep-sea coral reef longevity.
Plain Language Summary
In 2014, thriving deep-sea coral reefs were found in the Pacific near Hawaii and the Emperor Seamounts, where conditions were thought too acidic for reef development. To understand how these reefs persist, we studied the carbonate chemistry of this region during two research cruises (2021 and 2022). We found that the depth at which seawater becomes corrosive for coral skeletons (aragonite saturation horizon, ASH) changed far more from year to year than the gradual Pacific trend of 1–2 m yr−1. Human sourced carbon dioxide and natural shifts in ocean water masses do not explain the observed large changes. Instead, local biological and chemical processes, respiration and the dissolution of calcium carbonate, played a major role. When comparing seawater chemistry from 2014 to 2022, the ASH fluctuated even more dramatically than the predicted trend of 1–2 m yr−1. While climate change continues to drive corrosive deep waters closer to the surface, processes that occur on shorter timescales, local respiration and dissolution, can similarly expose deep sea coral reefs to corrosive conditions that can impact their longevity. Therefore, short term and local scale processes can affect long term acidification trends, making gradual shoaling harder to observe in short term data.
Continue reading ‘Aragonite saturation horizon variability along North Pacific seamounts and implications for deep-sea coral reefs’Elucidating impact of ocean acidification on coral exoskeletons using an in-situ (S)TEM platform
Published 25 August 2026 Science ClosedTags: biological response, corals, field, methods, mitigation, mortality, physiology
Scleractinian (stony) corals can build highly ordered aragonite (CaCO3) exoskeletons, which are vital for marine ecosystems, coastal stability, and of cultural and economic importance through supporting fisheries and tourism. However, they face multiple challenges through global climate change, unsustainable human activity, and coral-specific diseases. In the latter category, Stony Coral Tissue Loss Disease (SCTLD) has recently emerged as one of the most destructive coral diseases, spreading rapidly and causing widespread tissue mortality across many marine species [1]. We have recently started exploring remnant effects of this disease on Montastraea cavernosa exoskeletons, abundant throughout the Caribbean Sea, Gulf of Mexico, and Atlantic Ocean. Indeed, through use of multi-scale electron diffraction characterization techniques, we find that their skeletogenisis is impacted by this disease from the micro- through atomic scale [2]. Notably, at the nanoscale we observe pockets of more soluble amorphous calcium carbonate (ACC) within centers of calcification (CoCs; i.e. the center of the three-dimensional fans containing arranged elongated aragonite crystals) for healthy corals, which appear absent in STCLD-afflicted corals. At the atomic level, we reveal planar defects in diseased coral, which are much lower in density in healthy corals, presumably inflicted through dysregulation processes after tissue death.
Yet, the most severe threat to global coral reefs and their exoskeletons is climate change. As oceans increase the uptake of anthropogenic CO2 primarily from burning fossil fuels, ocean acidity has increased. The reduction in pH because of this Ocean Acidification (OA) not only reduces the rate of net ecosystem calcification, but also increases net dissolution of skeletons. At current trends, most coral exoskeletons are expected to dissolve starting in 2050 [3]. Currently, it is unclear how exactly (the onset of) dissolution proceeds and affects their aragonitic framework. Given our expertise in characterization of coral skeletons, herein we discuss a developed in-situ platform to investigate OA effects at the nanoscale.
As proof of concept, we sandwiched crushed geological aragonite nanoparticles between own fabricated SiNx-based chips, compatible with a Protochips Atmosphere gas cell holder [4]. Thereafter, we introduced water vapor at 14 Torr at room temperature (∼60% relative humidity) for 10 minutes to create a hydrated environment for the particles (Fig. 1b). In a third step, we introduced gaseous CO2 at a pressure of 1 atm (Fig. 1c). The formed unstable carbonic acid produces HCO3– and H+, which increases acidity (i.e. lowers pH). Indeed, we observe rapid dissolution of aragonite particles after CO2. While we expect roughly a pH ∼4 in this system, this experimental observation matches theoretical expectations that aragonite would dissolve under these conditions (Fig 1c-f). We further observe nucleation and growth of new particles in a dendritic fashion in the vicinity of the dissolved particles (Fig 1c-f). Likely, this is crystallization of calcite, the most stable crystalline polymorph of CaCO3, induced by local dissolution of aragonite [5]. Although pCO2 in the oceans is expected to be much lower (∼400 – 500 µatm) and thus dissolution timescales are expected to shift, this illustrates our platform can capture aragonite dissolution.
To expand our platform methodology, using conventional Ga+ FIB-methods, we prepared a lamella of geological aragonite with a thinned region (∼100 nm), which was then transferred on top of a SiNx-based chip, and attached this in one of the corners between the Si support and the SiNx layer (Fig. 2a). We were able to sandwich the lamella between both chips when observing the cell in the TEM (Fig 2b,c). Next, we will target healthy and STCLD-afflicted coral sections to investigate how nanoscale dissolution proceeds at/near more soluble areas including defects due to the devastating OA process. This understanding may allow for more accurate forecasting of marine ecosystem collapse, enabling targeted mitigation strategies, protecting food supplies, and predicting climate feedback loops [6].
Fig. 1. In-situ OA platform experiment showing TEM snapshots of: a) Initial geological aragonite nanoparticles. Inset: selected area diffraction pattern indicating aragonite spots. b) Introduction of water vapor (14 Torr) after 10 min. The white arrow indicates an apparent hydration layer surrounding the large particle. c) Introduction of CO2 at 1 atm pressure after 10 s. d) 60s e) 90s and f) 150s. White arrows in c-f) mark the outer layer of the large particle dissolving in time, red arrows illustrate growth of new crystals.
Fig. 2. a) SEM image of geological aragonite lamella attached to SiNx chip. b) TEM image of lamella after cell assembly (top and bottom chip). c) In-situ selected area diffraction pattern of the lamella.
Continue reading ‘Elucidating impact of ocean acidification on coral exoskeletons using an in-situ (S)TEM platform’Recent history of surface ocean acidification extremes that compound marine heatwaves
Published 25 August 2026 Science ClosedTags: field, methods, modeling
Compound extremes are of concern for ocean health, such as when ocean acidification extremes (OAX) and marine heatwaves (MHW) co-occur. These compound events (OAX∩MHW) may amplify stress beyond the impact of each driver alone, yet their historical distribution remains poorly quantified. We used an observation-based product (OceanSODA-ETHZ) to investigate surface ocean OAX∩MHW from 1982 to 2024. OAX and MHW are defined when detrended surface hydrogen ion concentration and sea surface temperature exceed their 95th percentiles. Events show distinct spatial and temporal patterns: they occur roughly four times more often than by chance in the low- to mid-latitudes, but are rare in the eastern tropical Pacific and the high latitudes. They occur primarily in summer and show strong variability associated with the El Niño-Southern Oscillation. Most events are small ( <106 km2) and brief (1 month), but several are exceptional, including: the Blob (2015) in the northeastern Pacific (12.6 ×106 km2), the North Atlantic marine heatwave lasting nearly a year (2023–2024), and the most intense event off the Western Australian coast (2011). Mechanistically, OAX∩MHW occur when warming-induced increases in [H+] are not offset by a reduction in dissolved inorganic carbon that typically accompanies MHW. This is typical of the permanently stratified low-to-mid latitude oceans, where the seasonal cycle of [H+] is controlled by temperature. By characterizing past compound extremes and improving our understanding of individual events, we highlight conditions that may lead to future ecosystems being at risk.
Plain Language Summary
This study examines the recent history of “compound extremes” in the ocean, where marine heatwaves and ocean acidification extremes occur simultaneously. Using observational data from 1982 to 2024, we find that these compound events are happening more frequently than would be expected by chance, particularly in the low- to mid-latitudes. Conversely, they are rare in the eastern equatorial Pacific and polar regions. These compound events are most prevalent during summer and are influenced primarily by the El Niño/Southern Oscillation. While most of these events are relatively small and short-lived, there have been a few exceptionally large, long, and intense occurrences. Some of the most notable events include: “The Blob,” in the northeastern Pacific in 2015; the longest-lasting event that occurred in the Atlantic Ocean from 2023 to 2024; and the most intense event that occurred off Western Australia in 2011. These compound extremes happen in areas where the warming from a marine heatwave also leads to an increase in ocean acidity. This phenomenon is most common in regions of the ocean that are permanently stratified, meaning they have distinct layers of water that do not mix well.
Continue reading ‘Recent history of surface ocean acidification extremes that compound marine heatwaves’Biological modulation of shell δ13C in Mytilus galloprovincialis and Phorcus sp.: divergent responses between CO2 vents and laboratory mesocosms
Published 17 August 2026 Science ClosedTags: biological response, BRcommunity, field, laboratory, Mediterranean, mesocosms, mollusks, physiology, vents
table isotopes are fundamental proxies for deciphering past environmental conditions and carbon cycle perturbations. However, applying these geochemical tools with a forward-looking perspective can also help predict the resilience of marine biota in future acidified oceans. This study investigates carbon uptake and biomineralization pathways under reduced pH in two ecologically keystone calcifying species: the bivalve Mytilus galloprovincialis and the gastropod Phorcus sp. To unravel these mechanisms, we adopted a dual approach, comparing isotopic trajectories (δ13C) under strictly controlled laboratory mesocosms with observations from natural CO2 vent systems in Ischia, Italy. Our results reveal a striking discrepancy between settings. Under laboratory conditions, both species exhibited a significant depletion in shell δ13C as pH decreased, directly tracking seawater carbonate chemistry. Conversely, specimens from the volcanic vents displayed a paradoxical δ13C enrichment at low-pH sites (pH ~7.4). These divergent trajectories indicate that in complex natural environments, the geochemical signal of ocean acidification can be overridden by metabolic overprints and trophically driven vital processes. Consequently, while laboratory experiments are essential to isolate kinetic fractionation, natural analogues remain crucial to capture the biological resilience and complex ecological feedback of future oceans. Future research combining these geochemical trends with direct, in vivo physiological assessments will be essential to precisely constrain the underlying metabolic kinetics and refine predictive metabolic models.
Continue reading ‘Biological modulation of shell δ13C in Mytilus galloprovincialis and Phorcus sp.: divergent responses between CO2 vents and laboratory mesocosms’Method for correcting the temperature dependence of field-type glass electrode pH sensors
Published 14 August 2026 Science ClosedTags: chemistry, field, methods, modeling, North Pacific, sensor
Seawater pH measurement is essential for monitoring ocean acidification and its biogeochemical impacts. Glass electrode pH sensors are widely used for in situ applications due to their ease of operation, low power consumption, and no reagent requirements. However, their accuracy can be affected by temperature-dependent effects, particularly those associated with the internal reference solution. Conventional calibration methods based on the Nernst response do not explicitly account for temperature-induced variations in the internal solution, which may lead to systematic bias under conditions with large temperature gradients. In this study, a correction method is proposed to address temperature-dependent errors by modeling the internal pH (pHin). The model incorporates two primary temperature-dependent contributions: the intrinsic temperature dependence of the phosphate buffer and potential shifts caused by activity changes in saturated KCl. These effects are combined through the electrode response factor (fR), defined as the ratio of the observed electrode slope to the theoretical Nernst slope, to estimate pHin as a function of temperature and correct measured pH values to a reference temperature of 25 °C. Application of the method to vertical seawater profiles demonstrated a reduction in deviation from colorimetric reference measurements. The corrected results showed reduced temperature-dependent bias across depth. This approach provides a practical framework for improving the reliability of in situ glass electrode pH measurements under varying thermal conditions. The proposed method addresses equilibrium temperature-dependent effects of the internal solution but does not explicitly account for transient hysteresis, pressure effects, or long-term sensor drift.
Giant kelp-associated variation in coastal seawater chemistry across contrasting sites in Chile and Tasmania
Published 13 August 2026 Science ClosedTags: algae, chemistry, field, Indian, South Pacific
Background and Aims
Widespread shifts in seawater chemistry are occurring across spatial and temporal scales, with important consequences for coastal ecosystems. Giant kelp (Macrocystis pyrifera) forests elevate seawater pH and dissolved oxygen (DO) through photosynthesis, potentially providing short-term refugia from ocean acidification and deoxygenation. However, whether these effects persist across contrasting environmental settings remains unclear. Here, we assess how biological and oceanographic conditions regulate giant kelp-mediated modification of seawater chemistry across multiple sites.
Methodology
Hourly measurements of seawater pH, DO and temperature were collected during spring–summer 2022–23 using paired deployments inside and outside giant kelp forests at one site in central Chile and four sites in Tasmania, Australia. The influence of giant kelp density was also evaluated at two sites in southern Chile and three sites in Tasmania. An upwelling index was calculated for the central Chile site to assess the influence of regional oceanographic forcing on kelp-associated seawater chemistry patterns.
Key Results
Hourly pH and DO were higher inside giant kelp forests than outside at the central Chile site and at one Tasmanian site. At these locations, stronger daytime pH–DO relationships indicated that photosynthetic carbon uptake exceeded night-time respiration, generating a net positive metabolic signal. In Tasmania, giant kelp density was positively associated with hourly pH and DO, whereas no such relationship was detected in southern Chile. At the central Chile site, kelp-associated effects intensified during a strong upwelling event, reducing the severity of low pH and DO conditions.
Conclusions
Giant kelp forests can locally buffer short-term fluctuations in seawater pH and DO, but this capacity is highly site-dependent and influenced by giant kelp density and environmental conditions. Overall, our findings suggest that continued loss of giant kelp forests in Tasmania may reduce their potential to provide short-term refugia, while in Chile the strength of kelp-mediated seawater chemistry modification is likely to remain strongly influenced by variability in upwelling and freshwater inputs.
Continue reading ‘Giant kelp-associated variation in coastal seawater chemistry across contrasting sites in Chile and Tasmania’CARIMED (CARbon, tracers, and ancillary data In the MEDiterranean Sea): a ship-based data synthesis product – overview and quality control procedures
Published 12 August 2026 Science ClosedTags: chemistry, field, Mediterranean
The Mediterranean Sea (MedSea) is highly sensitive to climate-driven changes in temperature, oxygen, and pH, among other variables. To better assess these long-term trends, we developed CARIMED (CARbon, tracers, and ancillary data In the MEDiterranean Sea), the first comprehensive, harmonised data synthesis product for the MedSea. CARIMED integrates hydrographic, inorganic carbon, transient tracer, and ancillary measurements from 46 research cruises spanning the period from 1976 to 2018, containing observations for the entire water column across all MedSea sub-basins. A substantial component of the data was retrieved from fragmented or locally archived historical records, thus consolidating previously inaccessible measurements. Following global synthesis approaches, CARIMED applies a quality-controlled, and bias-adjusted framework. A key adaptation was the secondary quality control (2QC) procedure, specifically tailored to the MedSea’s unique hydrography, utilising sub-basin divisions and supplementary checks (including statistical consistency assessments) to resolve complex, often contradictory, inter-cruise offsets. This rigorous process minimised systematic biases, yielding a dataset with improved consistency, and highlights the urgent need for adapted standard operating procedures and reference materials to address the MedSea biogeochemical particularities. CARIMED delivers two complementary, freely available products: the aggregated original cruise data product (https://doi.org/10.20350/digitalCSIC/17785, García-Ibáñez et al., 2025) and the final bias-adjusted data synthesis product (https://doi.org/10.25921/cp5b-zq67, Álvarez et al., 2025; hosted at https://www.ncei.noaa.gov/access/ocean-carbon-acidification-data-system/oceans/CARIMED/, last access: 26 June 2026). This essential resource establishes a new benchmark for assessing long-term biogeochemical trends, validating regional ocean models, and supporting climate-change mitigation and adaptation strategies in this rapidly changing semi-enclosed basin.
Continue reading ‘CARIMED (CARbon, tracers, and ancillary data In the MEDiterranean Sea): a ship-based data synthesis product – overview and quality control procedures’Crustose coralline algae buffer shallow reef environments from dissolution
Published 11 August 2026 Science ClosedTags: algae, biological response, chemistry, dissolution, field
Ocean acidification threatens coral reefs by reducing seawater pH and carbonate saturation state. Crustose coralline algae are particularly vulnerable because their high-magnesium calcite skeletons dissolve more readily than coral aragonite skeletons. However, this dissolution may increase alkalinity and buffer reef-water chemistry. Here we show, using repeated low-tide observations and in situ incubations in a shallow reef system in the southern Great Barrier Reef, that reef-water pH varies by more than one unit over the day (7.47 – 8.61), reaching levels comparable to those projected for the end of this century. Nighttime respiration promotes dissolution of high-magnesium calcite produced by crustose coralline algae, increasing alkalinity and helping maintain seawater supersaturated with respect to aragonite. At the same time, isolated coral incubations experience a greater decline in pH and aragonite saturation state in the absence of this buffering effect. These findings suggest that high-magnesium calcite-producing communities may help partially buffer reefs against future acidification.
Continue reading ‘Crustose coralline algae buffer shallow reef environments from dissolution’Warming and acidification shape zooplankton community dynamics in Jiaozhou Bay: evidence from an Acid-Heat Vector Intensity Index
Published 10 August 2026 Science ClosedTags: biological response, community composition, field, laboratory, North Pacific, otherprocess, zooplankton
Highlights
- Warming and coastal acidification shape Jiaozhou Bay zooplankton dynamics.
- AHIvec summarizes monitoring-oriented surface temperature-pH departure.
- GAMs showed nonlinear, zone-specific zooplankton response patterns.
Abstract
Ocean warming and coastal acidification often co-occur in nearshore embayments, yet their joint associations with zooplankton remain difficult to characterize because responses are frequently nonlinear and spatially heterogeneous. In this study, we developed an integrated quantitative framework for characterizing joint warming-acidification exposure in Jiaozhou Bay. Based on six cruises conducted at nine stations in May (spring) and August (summer) from 2022 to 2024, we characterized zooplankton communities using abundance, biomass, Shannon-Wiener diversity (H′), and Pielou’s evenness (J). We further introduced a joint-exposure indicator, the Acid-Heat Vector Intensity Index (AHIvec), which summarizes joint temperature-pH departure based on standardized anomalies of temperature and pH. Generalized additive models (GAMs) were then applied to examine nonlinear response patterns and zone-specific associations between environmental gradients and zooplankton community attributes. Within the 2022–2024 observation window, sea surface temperature was generally higher in 2024 than in 2022, whereas surface pH was generally lower; however, these patterns should be interpreted as short-term observations rather than formal long-term trend estimates. Zooplankton also showed pronounced spring-summer and spatial variability. Notably, abundance showed pronounced temporal variation and generally increased with temperature, whereas biomass peaked at intermediate temperatures (∼20–22 °C) and declined thereafter, indicating a mismatch between abundance and biomass. Although pH-related associations were weaker than temperature-related associations, they became more evident at the lower end of the observed pH range (approximately 7.7–7.9). The AHIvec gradient was associated with contrasting zone-specific patterns in zooplankton community attributes. Overall, recent temperature-pH variations were associated with changes in zooplankton abundance, biomass, and diversity in Jiaozhou Bay. The AHIvec + GAM framework provides a monitoring-oriented complement to direct temperature-pH analyses for characterizing joint exposure in coastal ecosystems.
Ocean acidification alters phytoplankton diversity and community structure in the coastal water of the East China Sea
Published 4 August 2026 Science ClosedTags: biological response, community composition, field, laboratory, mesocosms, North Pacific, otherprocess, physiology, phytoplankton, primary production, respiration
Anthropogenic CO2 emissions and their continuous dissolution into seawater lead to seawater pCO2 rise and ocean acidification (OA). Phytoplankton groups are known to be differentially affected by carbonate chemistry changes associated with OA in different regions of contrasting physical and chemical features. To explore responses of phytoplankton to OA in the Chinese coastal waters, we conducted a mesocosm experiment in a eutrophic bay of the southern East China Sea under ambient (410 µatm, AC) and elevated (1000 µatm, HC) pCO2 levels. The HC condition stimulated phytoplankton growth and primary production during the initial nutrient-replete stage, while the community diversity and evenness in both pCO2 treatments were reduced during this stage due to the rapid nutrient consumption and diatom blooms, and the subsequent shift from diatoms to hetero-dinoflagellates led to a decline in primary production during the mid and later phases under nutrient depletion. HC treatment suppressed the diatom-to-dinoflagellate succession and enhanced the subsequent remineralization of organic matter, thereby facilitating smaller phytoplankton to dominant and sustaining primary production. Our findings indicate that, the impacts of OA on phytoplankton diversity in the coastal water of the southern East China Sea depend on availability of nutrients, with primary productivity and biodiversity of phytoplankton reduced in the eutrophicated coastal water.
Continue reading ‘Ocean acidification alters phytoplankton diversity and community structure in the coastal water of the East China Sea’Localized biogeochemistry and seasonality govern carbonate chemistry in estuarine mangrove ecosystems
Published 3 August 2026 Science ClosedTags: biogeochemistry, chemistry, field, Indian
Sundarbans, the world’s largest contiguous mangrove ecosystem and representing shallow coastal Bay of Bengal of the Northern Ocean, faces dynamic climate variations, including ocean acidification. To delineate ocean acidification from natural pH variations, it is crucial to perform long-term measurements of multiple carbonate chemistry parameters such as pH, total alkalinity (TA), and dissolved nutrients, among others. In the present study, surface water carbonate chemistry parameters, including TA, pH, and dissolved nutrients (o-phosphate and silicate), were analysed monthly between 2014 and 2022 in three pre-defined stations, namely Stn1, Stn2, and Stn3, part of Sundarbans Biological Observatory Time Series (SBOTS) located in Sagar Island, the largest island of the Indian Sundarbans. The observed deviation from the linear TA-Salinity curve in the studied sites of SBOTS showed the influence of freshwater in modulating TA. Generalized Additive Model (GAM) revealed substantial seasonal variability in the controls on TA. During monsoon, salinity was a dominant driver of carbonate chemistry, consistent with enhanced freshwater discharge. In contrast, during the post-monsoon season, primary productivity as indicated by the relationship with Chla, dissolved silicate, was found to exert a stronger influence on TA variability. Multilinear regression (MLR) analysis of calculated pCO2 further supported these seasonal trends. Overall, the findings highlight the importance of season-specific assessments, highlighting the critical role of freshwater discharge in shaping estuarine carbonate dynamics. These insights are vital for predicting the vulnerability and response of mangrove estuaries under future climate change scenarios.
Continue reading ‘Localized biogeochemistry and seasonality govern carbonate chemistry in estuarine mangrove ecosystems’Seasonal variations in the bulk density of planktic foraminiferal tests in response to oceanographic changes in the western North Pacific
Published 3 August 2026 Science ClosedTags: biogeochemistry, biological response, chemistry, field, laboratory, North Pacific, zooplankton
Ocean acidification (OA) is a major component of ongoing global environmental change, yet its biological impacts on open-ocean calcifiers remain insufficiently quantified. Here, we investigate seasonal variability in the individual test density of the planktic foraminifer Globigerina bulloides in the western North Pacific. Test density was determined using high-resolution microfocus X-ray computed tomography, enabling micron-scale structural assessment. Time-series samples collected by sediment traps moored at 150 m and 540 m at station K2 (2008–2009) reveal pronounced seasonal variability, with test density reduced by ~ 20% during winter relative to other seasons. Seasonal reductions were associated with enhanced vertical mixing and positively correlated with mixed-layer pH, carbonate-ion concentration, and temperature. Additional plankton-tow samples collected between 2010 and 2016 further support a strong linkage between carbonate chemistry and calcification intensity. Multiple regression analysis shows that carbonate-ion concentration independently explains 46.6% of the variance in test density, whereas temperature accounts for only 0.25%, indicating that carbonate-ion availability exerts a dominant control on test density. Given the ongoing decline in carbonate-ion concentration in the North Pacific (~ 0.77 µmol kg−1 yr−1), our results imply an annual decrease of ~ 2 µg mm−3 in foraminiferal test density. Continued OA may therefore reduce biogenic CaCO3 shell density, potentially weakening the efficiency of the carbonate-based biological carbon pump. This study provides quantitative field-based evidence linking seasonal carbonate chemistry to shell density variability in open-ocean calcifiers.
Continue reading ‘Seasonal variations in the bulk density of planktic foraminiferal tests in response to oceanographic changes in the western North Pacific’pH–salinity-driven regulation in carbon utilization kinetics of the intertidal seagrass Zostera japonica along China’s coastline
Published 27 July 2026 Science ClosedTags: biological response, BRcommunity, field, laboratory, methods, morphology, North Pacific, phanerogams, photosynthesis, physiology
Highlights
- We innovatively define two biophysical parameters (pH change rate and acceleration) of Zostera japonica photosynthesis.
- pH change acceleration is sensitive to the regulation of carbon utilization pathways during Z. japonica photosynthesis.
- A progressive pH–salinity-driven regulation mode of carbon utilization pathways in Z. japonica photosynthesis is summarized.
- The impact of ocean acidification and alkalization on seagrass is characterized from a new biophysical standpoint.
Abstract
Seagrass carbon concentration mechanisms are modulated by seawater pH and salinity, yet their progressive regulation in photosynthetic inorganic carbon utilization pathways remain poorly characterized. This study novelly mathematically characterized first-order (pH change rate) and second-order (pH change acceleration) derivatives from pH-drift experiments in the intertidal seagrass Zostera japonica along China’s coastline. The pH change-based method effectively highlights the dissolved inorganic carbon (DIC) utilization and biomass accumulation of seagrass, while pH change acceleration is sensitive to the progressive switch of DIC utilization pathways during Z. japonica photosynthesis. As pH increases, six significant regulations emerge that have ecophysiological significance: a. primary regulation via reaching the CO2 compensation point; b. extracellular carbonic anhydrase (exCA) activity dropping to negligible levels; c. diminished efficiency of proton pump-mediated extracellular acidification in supplying CO2; d. regulation via reaching the bicarbonate saturation point; e. regulation via reaching the bicarbonate compensation point; and f. regulation via enhanced respiratory CO2 into seawater temporarily stimulating photosynthesis as a feedback. We summarize a progressive and universal pH–salinity-driven regulation mode reflecting different combinations of DIC utilization pathways and their respective intensities. Specifically, seawater pH modulates the mode’s fluctuating thresholds, while salinity governs the amplitude. Unexpectedly, elevated salinity serves as an effective stimulant for Z. japonica to maintain strong DIC utilization intensity in high pH (> 9.1) environments. Ocean acidification could increase pH change acceleration by 166%, enhancing carbon fixation, whereas artificial ocean alkalinity enhancement (Ca(OH)2 supplementation and olivine-seawater weathering) could reduce it by 165% and 105%, respectively, risking mortality of Z. japonica. Additionally, the salinity-dependent braking point (where acceleration drops to zero) serves as a critical threshold for seagrass photosynthesis and a new factor for transplantation-based restoration.
Continue reading ‘pH–salinity-driven regulation in carbon utilization kinetics of the intertidal seagrass Zostera japonica along China’s coastline’Variation and influencing factors of water alkalinity in estuary-bay waters of Zhanjiang Bay, China
Published 27 July 2026 Science ClosedTags: chemistry, field, modeling, North Pacific, regionalmodeling
This study investigated the spatial distribution, seasonal variation, and drivers of surface seawater alkalinity (Alk) in Zhanjiang Bay (ZJB) using high-frequency seasonal sampling in the summers and winters of 2023. Surface Alk ranged from 525.3 to 2213.3 μmol·L−1, with mean values of 1373.1 ± 420.9 μmol·L−1 (summer, n = 28) and 1612.3 ± 343.7 μmol·L−1 (winter, n = 20). Spatially, Alk increased progressively from the estuary to the inner bay and further to the bay mouth, reflecting a typical dilution gradient. Correlation analyses showed that summer Alk was positively correlated with salinity (ρ = 0.706, p < 0.001), indicating that salinity changes associated with conservative mixing were a dominant control, whereas the weaker winter correlation (ρ = 0.473, p < 0.001) suggested that biological processes may play a more important role. Tidal forcing was significantly associated with diurnal Alk variations, particularly in the estuary and inner bay. In the estuary, high Alk occurred during high tide, consistent with tidal mixing; in the inner bay, elevated Alk was observed during low tide, suggesting a possible tidal pumping effect. These findings provide baseline data on Alk dynamics in a subtropical estuarine bay and contribute to understanding the carbonate system and buffering capacity in similar coastal systems. However, because measurements of dissolved inorganic carbon and pCO2 were unavailable, a quantitative assessment of carbon sink capacity requires further investigation.
Continue reading ‘Variation and influencing factors of water alkalinity in estuary-bay waters of Zhanjiang Bay, China’Water mass-driven variations in primary production and bacterial respiration during the spring bloom in the Fram Strait
Published 23 July 2026 Science ClosedTags: Arctic, biological response, community composition, field, laboratory, modeling, multiple factors, otherprocess, oxygen, photosynthesis, primary production, prokaryotes, regionalmodeling, respiration
Highlights
- Remote sensing indicates declining bloom in cold and developing bloom in warm water
- Primary production peaks in polar and arctic surface water masses
- Bacterial production is coupled to primary production despite thermal sensitivity
- Oxygen-based community respiration is highest in warmer water masses
- Oxygen-based and INT-based respiration estimates differ by an order of magnitude
Abstract
The Fram Strait is the primary oceanic gateway to the Arctic Ocean and has highly dynamic oceanographic conditions. Oceanographic conditions can shape community compositions, which is increasingly shown using molecular studies, but rate measurements remain scarce, especially for respiration in the Arctic Ocean. Here, we assessed primary production (PP), bacterial production (BP), bacterial abundances (BA), and community respiration (CR) using Winkler titrations and in vivo Iodo-Nitro-Tetrazolium (INT) reduction within the upper 50 m across water masses of the Fram Strait that had varying bloom conditions in spring 2021. We complemented in situ observations with remote sensing of sea surface temperature (SST) and chlorophyll-a (SSC) to infer bloom phenology in warm (θ>2°C), intermediate (2>θ>0°C), and cold (θ<0°C) waters using remote sensing machine-learning. In the cold, nutrient-rich surface waters, a subsiding spring bloom was associated with elevated PP, BP, and BA alongside a high temperature sensitivity (Q10) that indicates active microbial turnover. In contrast, the warm Atlantic-influenced waters exhibit a relatively lower PP but moderate cell-specific BP, suggesting bacterial maintenance metabolism under pre-bloom conditions. Notably, bacterial respiration (BR) estimates differed by 5- to 80-fold between the Winkler and in vivo INT methods. Although the true BR likely lies between these estimates, our results highlight the substantial microbial activity and underscore the need for more accurate BR measurements in Arctic studies.
Continue reading ‘Water mass-driven variations in primary production and bacterial respiration during the spring bloom in the Fram Strait’
