Posts Tagged 'phytoplankton'

Seawater acidification accelerates growth but hastens decline in batch cultures of the marine diatom Thalassiosira pseudonana

Published 22 April 2026 Science Leave a Comment
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Diatoms are characterized by rapid cell division and a high capacity to adapt to environmental variability, and some species can form blooms when environmental conditions are favorable. Previous studies have largely focused on the bloom development phase, during which biomass accumulates rapidly, whereas the decline phase-despite its critical role in carbon export and microbial loop dynamics-has received far less attention. Here, we tracked changes in cell density and inorganic carbon utilization characteristics throughout the entire course of a simulated Thalassiosira pseudonana bloom under ambient (420 μatm) and elevated pCO2 (1000 μatm) conditions. Inhibitors of carbonic anhydrase and direct bicarbonate transporters were applied to investigate the characteristics of inorganic carbon utilization. The relationship between photosynthetic rate and inorganic carbon concentration was measured to assess inorganic carbon affinity. The simulated T. pseudonana bloom was characterized by rapid cell density accumulation, reaching a peak within 10 days, followed by a rapid decline without a distinct stationary phase. As the bloom progressed, photosynthetic rate and the maximum quantum yield of photosystem II declined, whereas the inorganic carbon affinity increased. Elevated CO2 enhanced growth and maximum quantum yield during the acceleration phase but resulted in an 86% higher fitted death rate during the decline phase. Regarding the relationship between photosynthetic rate and dissolved inorganic carbon concentration, elevated CO2 increased the maximum photosynthetic rate and half-saturation constant only during the acceleration phase. Collectively, these results indicate that seawater acidification can influence both biomass accumulation and decline intensity in diatom blooms, with potential consequences for carbon sequestration and its redistribution among biogeochemical pools.

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Nonlinear responses of phytoplankton size, diversity, and chlorophyll a to environmental forcing along the Yellow Sea

Published 20 April 2026 Science Leave a Comment
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Highlights

  • Miniaturization coincides with reduced species diversity and elevated chlorophyll a.
  • Declining pH and reduced dissolved inorganic nitrogen are key drivers for smaller cells.
  • Salinity, dissolved oxygen and cooling jointly reshape phytoplankton community structure.

Abstract

Phytoplankton are tiny drifting photosynthetic organisms that support marine food webs and help control the global carbon cycle. However, it remains unclear how ongoing environmental changes are altering their cell size, species diversity, and chlorophyll a concentration in coastal seas. In this study, we investigated changes in phytoplankton cell size, species diversity, and chlorophyll a concentration along the Yellow Sea coast of China from 2021 to 2024, based on fourteen research cruises conducted at twenty-six coastal stations. We then employed statistical models to explore how individual and combined environmental factors were related to those biological features. We observed a clear shift to predominance of smaller cells, a reduction in species diversity, and an increase in chlorophyll a concentration. pH and reduced dissolved inorganic nitrogen were strongly associated with smaller cell size, while higher salinity and higher oxygen were associated with lower diversity. Lower surface water temperature and higher dissolved oxygen were associated with higher chlorophyll a concentrations. Overall, our findings suggest that interacting changes in pH, nutrient supply, temperature, salinity, and oxygen are associated with a simpler phytoplankton community structure, smaller mean cell size, and higher biomass levels in the Yellow Sea coastal region, with potential consequences for local food webs and carbon cycling.

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Effects of pH on phytoplankton growth and diversity in a tropical coastal ay: an experimental study

Published 14 April 2026 Science Leave a Comment
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This research was intended to investigate the effects of reduced pH on the growth rates and diversity of phytoplankton in the coastal waters of Visakhapatnam in the Bay of Bengal. A short-term (six days) microcosm experiment was conducted with different pH conditions such as ambient (control-in situ pH), pH 8.0 (0.2 pH units drop from in situ pH) and pH 7.8 (0.4 pH units drop from in situ pH) corresponding to low, medium, and high future pH decline scenarios, respectively, to study the direct acidification impact on phytoplankton. The results revealed that the phytoplankton communities exhibit a wide range of responses including changes in growth rate during incubation. From the two treatments, a more pronounced response was observed in pH 7.8 conditions compared to the present pH scenario. Some phytoplankton communities exhibited positive growth responses to acidification, while others showed negative reactions in terms of biodiversity. Notably, Pseudo-nitzschia sp. became dominant during acidification, whereas larger centric diatoms such as Skeletonema spp., Chaetoceros spp., Rhizosolenia sp., Dactyliosolen fragilissimus, and Ditylum brightwellii showed no significant growth response to upcoming acidified conditions. This indicates a diverse array of physiological tolerance among the plankton species to environmental shifts. This study recommends further research to explore the impact of ocean acidification on other planktonic species in the coastal waters of Bay of Bengal.

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Climate-driven restructuring of phytoplankton productivity and community composition in the south-eastern Black Sea: insights from seasonal CO2-temperature manipulation experiments

Published 9 April 2026 Science Closed
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Semi-enclosed marine systems with low buffering capacity, such as the Black Sea, are expected to experience amplified impacts of ocean acidification and warming, yet experimental evidence on their combined short-term effects on natural phytoplankton assemblages remains limited. Here, we present a seasonally resolved one-year study (four experiments conducted between 2022 and 2023) based on 48 h short-term microcosm incubation experiments using natural phytoplankton communities collected from coastal and offshore stations in the south-eastern Black Sea. CO2 concentrations (360, 600, and 760 ppm) and temperature (ambient and +3 °C) were manipulated to examine short-term physiological and compositional responses under projected climate scenarios. We hypothesised that CO2 and warming would exert both independent and interactive effects on short-term particulate organic carbon production (14C uptake rates) and relative community composition, with responses varying seasonally and being most pronounced during summer stratification.

Short-term particulate primary production increased by ∼22% and ∼36% at 600 and 760 ppm CO2, respectively (p<0.05), while warming provided an additional 14–22% enhancement depending on season, with significant CO2 × temperature interaction terms detected for total production (two-way ANOVA, p<0.05), indicating synergistic CO2–temperature effects. Warming and moderate CO2 enrichment were associated with increased relative contributions of nano- and picophytoplankton (by ∼6–10%), whereas high CO2 reduced the warming-driven shift toward smaller cells by maintaining microphytoplankton contributions ∼10–15% higher than in the warming-only treatment. Carbonate chemistry responded strongly to CO2 manipulation, with pH declining from in-situ values of 8.09–8.21 to 7.06–7.52 during incubations and minor reductions in total alkalinity, reflecting the weak buffering capacity of the system. Pigment composition and microscopy indicated short-term increases in dinoflagellate relative abundance (∼12–18%) and concurrent declines in diatom markers, accompanied by accelerated nitrate depletion and reduced nitrogen-to-phosphorus (N:P) ratios, consistent with enhanced nitrogen limitation.

Overall, these findings demonstrate pronounced short-term sensitivity of natural phytoplankton assemblages in the south-eastern Black Sea to combined CO2 and warming under controlled incubation conditions. Because these results derive from 48 h microcosm experiments, they represent short-term physiological and compositional responses rather than direct evidence of long-term ecosystem restructuring, yet the observed patterns suggest potential implications for trophic efficiency, harmful algal bloom development, and carbon cycling in this low-buffer, stratified basin under future climate forcing.

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Resilient adults but vulnerable larvae: demographic pathways of chiton decline under ocean acidification

Published 26 March 2026 Science Closed
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Highlights

  • Natural CO₂ seep systems showed reduced intertidal chiton abundance.
  • Adult chitons showed resilience to acidification in field and lab experiments.
  • Larval survival and recruitment were strongly impaired under acidified seawater.
  • Population declines are linked to early life-stage vulnerability.
  • Loss of chitons may reduce grazing and bulldozing, reshaping intertidal communities.

Abstract

Ocean acidification (OA) is a major threat to marine calcifiers; however, the sensitivity across taxa and life stages remains elusive. In this study, we combined field surveys of natural CO₂ seeps with laboratory exposure, transplantation, and larval settlement experiments to assess the effect of OA on chitons, a group of calcifying grazers and bulldozers that play critical roles in the structure of rocky intertidal ecosystems. Field surveys revealed approximately 98.6% reduction in chiton (Acanthopleura loochooana, Liolophura japonica, and Acanthochitona rubrolineata) abundance at acidified habitats (pH 7.6), despite greater microalgal food availability and no detectable increase in predator abundance. Laboratory CO₂-exposure experiments showed no direct effect of OA on adult A. loochooana survival, which is consistent with the presence of protective structural features in the valves that confer resistance to dissolution. Transplant experiments revealed no evidence of increased adult A. loochooana mortality in the acidified habitats (pH 7.6). In contrast, larvae showed pronounced sensitivity to OA, with acidified seawater (pH 7.6) reducing larval settlement by approximately 81.5% compared to control conditions (pH 8.1); early life stages were the most vulnerable. These findings suggest that OA-associated decline in chiton abundance is mainly mediated by impaired recruitment rather than by direct adult mortality, predation, or food limitation. Given the role of chitons as grazers and bulldozers, their loss could substantially change intertidal community dynamics by decreasing grazing pressure and disturbing algal and microbial assemblages. Our findings underscore the criticality of considering life-stage vulnerability and ecological function when evaluating the ecosystem-level consequences of OA.

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CO2 rise modulates the physiological performance of the diatoms Thalassiosira pseudonana and Thalassiosira weissflogii to light challenge

Published 25 March 2026 Science Closed
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Highlights

  • Ocean acidification boosts diatom growth independent of CO2 ramping speed.
  • Acidification changed PSII repair and photoprotection strategies under high light.
  • Species-specific adaptive advantages altered in acidified, light-variable oceans.

Abstract

Diatoms are major contributors to marine primary productivity and typically dominate well-mixed coastal environments characterized by rapidly fluctuating light levels. Yet, how the ongoing ocean acidification (OA) caused by rising CO2 affects their capacity to exploit such variable light is not well known. In this study, the diatoms Thalassiosira pseudonana and Thalassiosira weissflogii were cultured under two CO2 acidification regimes (gradual increase from ambient 400 to 1000 ppmV in ∼200 ppmV increments vs. direct elevation from 400 to 1000 ppmV) and exposed to high light stress to assess comparative physiological responses. Both diatoms showed significant increases in maximum electron transfer rate and saturation light intensity, with T. weissflogii additionally exhibiting elevated PsbA and Rubisco content. Growth rates increased by 15 % and 27 % for T. pseudonana and T. weissflogii respectively, with no significant difference between direct versus gradual CO2 elevation treatments. T. pseudonana demonstrated higher intrinsic susceptibility to PSII photoinhibition than T. weissflogii, OA didn’t significantly alter the functional absorption cross-section for PSII photoinactivation in either species. Notably, OA decreased PSII repair rates in T. pseudonana, while T. weissflogii maintained repair capacity through increased PsbA content and sustained non-photochemical quenching. These findings suggest T. weissflogii may gain a competitive advantage in future acidified, light-variable oceans due to its enhanced photoprotection and PSII repair capacity, highlighting species-specific resilience to combined environmental stresses.

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Influence of ocean warming and acidification on juveniles of the true giant clam, Tridacna gigas, and its microalgal symbionts

Published 19 March 2026 Science Closed
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Uncontrolled carbon dioxide emissions from human activities contribute to ocean warming and acidification. These alterations in ocean chemistry threaten marine organisms, such as the true giant clam, Tridacna gigas, which is already imperiled due to overharvesting and habitat destruction. To gain an understanding of the physiological and molecular responses of T. gigas and its symbiotic dinoflagellates to ocean warming and acidification, we subjected juvenile individuals to different treatments simulating predicted seawater pH (7.6 and 8.0) and temperature (28°C, 30°C, 32°C and 34°C) levels for the next century. Juvenile giant clams were able to tolerate sustained exposure to temperatures of up to 32°C and pH as low as 7.6, while exposure to higher temperature (34°C), regardless of pH level, resulted in total mortality after a week. However, symbiosis was compromised even in the sublethal treatments, as indicated by the decrease in Symbiodiniaceae density and changes in symbiont gene expression. Symbionts significantly upregulated genes involved in splicing, translation, fatty acid metabolism, and DNA repair, which may constitute an adaptive response, while downregulating genes involved in photosynthesis and transmembrane transport, suggests impaired transfer of photosynthates to the host. These findings demonstrate the vulnerability of the juvenile T. gigas holobiont to heat stress, highlighting the critical importance of continued conservation and management alongside efforts to mitigate global changes in ocean conditions to safeguard this iconic marine bivalve.

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Multi-level holobiont dysregulation increases the ecological risk of combined ocean acidification and benzo[a]pyrene pollution to the reef-building coral Porites lutea

Published 17 March 2026 Science Closed
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Highlights

  • Combined ocean acidification and BaP induce holobiont dysregulation, evidencing by a decoupled Symbiodiniaceae proliferation and a collapse of the archaeal Nanoarchaeota-Halobacterota symbiosis.
  • The coral host shifts its defense strategy from antioxidant capacity to cellular homeostasis, while the bacterial community increases functional redundancy, revealing a costly acclimation mechanism.
  • The multi-level dysregulation demonstrates an underestimated ecological risk, highlighting that current single-stressor risk assessments are inadequate for protecting corals under complex pollution scenarios.

Abstract

Reef-building corals are increasingly threatened by the combined effects of global climate change and localized organic pollutants. However, the holistic impacts of co-exposure to ocean acidification (OA) and benzo[a]pyrene (BaP) on coral holobionts remain poorly understood. Here, we investigated the multi-level responses of the reef-building coral Porites lutea to short-term (7-day) exposure to OA (pH 7.80), BaP (10 µg/L), and their combination, by integrating physiological measurements with microbiome profiling (ITS2 and 16S rRNA). We found that combined stress was associated with a dysregulated response in Symbiodiniaceae, characterized by a significant increase in cell density without a parallel rise in chlorophyll content, suggesting a possible compensatory but inefficient proliferation response. Despite this, the dominant symbiont Cladocopium C15 remained stable. The bacterial diversity increased (e.g., enrichment of Ruegeria and Acanthopleuribacter, decline of Endozoicomonas), which may suggest enhanced functional redundancy, while the archaeal community was significantly restructured, most notably a marked decline of the putative obligate Nanoarchaeota–Halobacterota symbiosis. At the host level, combined stress was associated with suppressed antioxidant enzyme activities (SOD/POD) but upregulated genes related to protein folding (Hsp90) and calcium homeostasis (NCX1, VAMP4). These findings suggest a complex holobiont reconfiguration under combined stress, involving a stabilized core symbiont, altered microbiomes, and a shifted host defense strategy. Our study suggests that the ecological risk of combined OA and organic pollution may not be extrapolated from single-stressor responses, indicating the need to incorporate multi-stressor frameworks into coral reef risk assessments.

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Stony coral symbioses show variable responses to future ocean conditions

Published 16 March 2026 Science Closed
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Coral reefs support over a quarter of marine species and nearly a billion people worldwide but are also among the ecosystems most threatened by anthropogenic impacts. There is long-standing debate about whether coral symbioses will be disrupted or respond adaptively under future ocean conditions. Using a factorial 2.5-year future-ocean mesocosm experiment across eight coral species representing the major coral lineages, we tracked symbiont community shifts within replicate fragments from the same individual coral. Some corals exhibited stochastic divergence consistent with dysbiosis, whereas others showed deterministic, thermally adaptive shifts. Heat stress generally reduced symbiont diversity and promoted predictable restructuring, supporting deterministic processes under moderate stress but stochastic dysbiosis under extreme conditions. We propose that adaptive and stochastic responses represent endpoints along a continuum of host-orchestrated symbiont sorting. This study bridges coral reef ecology with broader host–microbiome theory, offering an integrated perspective on how symbiotic systems may respond to environmental change.

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Environmental controls and nonlinear responses of the diatom-dinoflagellate ratio in Jiaozhou Bay

Published 13 March 2026 Science Closed
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Highlights

  • Dia/dino abundance, biomass, and diversity ratios exhibited similar temporal patterns;
  • All ratios showed considerable heterogeneity without a consistent distributional trend;
  • Dia/dino ratios responded distinctly to DO, nutrients, and their interactions;
  • Shifting seawater properties exerted large influence on diatom-dinoflagellate dynamics.

Abstract

Diatoms and dinoflagellates are widely recognized as key indicators of marine ecosystem status and play central roles in ecosystem functioning and biogeochemical cycling. Yet how these two major phytoplankton groups adjust to changing coastal environments, and whether such adjustments occur coherently in different ecological dimensions, remains poorly constrained. Hence, we studied the temporal and spatial dynamics of diatom-dinoflagellate (dia/dino) ratios in Jiaozhou Bay during 2021 and 2024, integrating abundance-, carbon biomass-, diversity-, and richness-based metrics. Although abundance, biomass, and diversity ratios exhibited broadly similar temporal trajectories, the richness ratio displayed an opposite pattern, highlighting a decoupling between numerical dominance and species composition. Spatially, all four ratios exhibited significant heterogeneity, without a consistent nearshore-offshore gradient, reflecting complex local regulation. Correlation analyses revealed distinct controls on dia/dino ratios. The abundance ratio increased under conditions of elevated dissolved inorganic nitrogen (DIN) and reduced dissolved oxygen (DO), whereas the diversity ratio was associated with high DIN and low dissolved inorganic phosphorus (DIP). In contrast, the carbon biomass ratio was primarily linked to reduced DO and lower pH, while the richness ratio responded most strongly to the combined influence of low DO and elevated DIP. These contrasting responses indicated that dia/dino ratios captured different facets of phytoplankton community reorganization rather than reflecting a single environmental driver. Overall, our results suggested that the balance between diatoms and dinoflagellates in Jiaozhou Bay emerged from the coupled and nonlinear interactions among nutrient availability and oxygen dynamics. This study highlighted the dia/dino balance as an integrative indicator of coastal ecosystem condition and implied the importance of considering multiple ecological dimensions when assessing phytoplankton responses to ongoing eutrophication and environmental change.

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Eco-evolutionary dynamics of planktonic calcifying communities under ocean acidification

Published 12 March 2026 Science Closed
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Increasing emissions of CO2 into the atmosphere are causing ocean acidification, threatening calcifying organisms. In this study, we model the physiological responses of coccolithophorids to acidification to understand the ecological and evolutionary outcomes of a system in interaction with zooplankton. Assuming a trade-off between growth and protection against grazing, we show that calcification has bivalent effects on transfers between two trophic levels and that acidity can strongly alter energy transfers. Taking into account the evolution of calcifying phenotypes in response to acidification, we show that the system outcome contrasts with previous results. While the effect of evolution depends on how calcification affects grazing, it nevertheless follows that acidification leads to a decrease in calcifying capacity. This evolutionary decrease may be progressive, but can also lead to tipping points where abrupt shifts may occur. Such a counter-selection of calcification in turn affects ecosystem functioning, enhancing energy transfers within the system and modifying carbon fluxes. We discuss how such eco-evolutionary changes may impact food webs integrity, carbon sequestration into the deep ocean and therefore endanger the carbon pump stability.

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Interactive effects of ocean acidification and settlement biofilm on the early development of the European abalone Haliotis tuberculata

Published 3 March 2026 Science Closed
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Highlights

  • Interactive effects of OA and settlement biofilm were investigated on juvenile abalone.
  • Post-larval density and total length decreased significantly under lower pH.
  • Biofilm composition induced indirect effects through changes in diatom biomass.
  • (pH × Ulvella) interaction affected abalone shell resistance and colouration.

Abstract

Ocean acidification (OA) and associated shifts in carbonate chemistry represent major threats to marine organisms, particularly calcifiers. OA effects can be influenced by other environmental variables, including the biotic environment. This study investigated the effects of OA and algal density, acting through an Ulvella-conditioned settlement biofilm, on post-larval and juvenile abalone (Haliotis tuberculata). In a three-month full factorial experiment, abalone were exposed from metamorphosis onward to two pH conditions (ambient 8.0 and reduced 7.7) and two initial densities of the green alga Ulvella lens on settlement plates. Biofilm biomass and composition were characterised using spectral reflectance and HPLC pigment analysis. Biological (density, length), physiological (respiration rate), behavioural (hiding response) and shell parameters (colour, surface corrosion, strength) of abalone were measured. Biofilm biomass and composition assessed with pigment proxies remained relatively stable under both pH conditions, though greater variability in algal biomass occurred at low initial Ulvella density. Post-larval density and total length decreased significantly under low pH, while high Ulvella density reduced juvenile length at 80 days, likely due to competition between algal groups. A pH × Ulvella interaction affected shell fracture resistance and colouration, but not metabolism or behaviour, indicating that juvenile abalone maintained vital functions. Overall, the results confirm the sensitivity of early H. tuberculata stages to moderate OA (−0.3 pH unit) and highlight indirect macroalgal effects through changes in diatom cover. In natural environment, the capacity of abalone to cope with future OA will depend on complex trade-offs between direct acidification effects and food-related biotic interactions.

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Ocean acidification reduces diatom and photosynthetic gene abundance on plastic in an coastal bay mesocosm experiment

Published 25 February 2026 Science Closed
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Discarded plastics are accumulating in the global ocean and posing threat to marine life. The plastisphere – the community colonizing plastic surfaces – profoundly influences plastic’s environmental behavior, affecting its degradation and entry into marine food webs. Ocean acidification (OA) resulted from anthropogenic CO2 emissions, is also threatening marine ecosystems, but the effect of OA on the structure and ecological function of the plastisphere community remains poorly understood. Here, using a mesocosm experiment, we investigated the effects of OA on the plastisphere colonizing floating PET plastic bottles. The study was conducted using subtropical eutrophic coastal water from Southern China under two CO2 conditions: increased CO2 to 1000 μatm (HC) and ambient CO2 410 μatm (LC). Metagenomic sequencing of the plastic samples, after exposure for 32 days, showed striking changes in relative abundance of eukaryotes and bacteria caused by HC. There was a 75.3 % decrease in eukaryote read abundances at high CO2, most strikingly a 95.6% decrease in the relative abundance of diatoms. In addition, the relative abundance of genes involved in photosystem II light reactions and pigment synthesis decreased under high CO2 conditions. This suggests that OA could reduce the photosynthetic potential within the plastisphere. Shifts in plastisphere community structure and potentially diminished photosynthesis under OA could influence the food chains within plastisphere, plastic degradation, transportation, and carbon cycle involving plastics. Overall, our results suggest that OA can alter the functional ecology of the plastisphere, with potential implications for marine biogeochemical processes and food web dynamics in subtropical eutrophic coastal water.

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Acute microbial and nutrient responses to elevated temperature and pCO2: a coastal UK microcosm study

Published 13 February 2026 Science Closed
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The coastal ocean’s ecosystem resilience is consistently hampered by the compounding impacts of projected climate change and anthropogenic perturbation. In this microcosm study, we investigated how elevated temperature and pCO2, together with episodic nutrient pollution and a short-term marine heatwave, affect the nano- and picoplanktonic community of primary producers and subsequent changes in coastal biogeochemistry. Our study demonstrates that future elevated temperature and pCO2 conditions impact the planktonic community, first by a ∼ 50 % decreased autotrophic abundance, and second by a shift from larger eukaryotic to smaller cells. When combined with a heatwave, total primary producers experienced an additional 37–38 % decrease, indicative of a negative synergistic effect beyond either stressor alone. Picoeukaryotes were particularly sensitive, declining by 44–50 %. Short-term nutrient pollution under ambient conditions induced a 41 % increase in cell abundance, but failed to stimulate biomass under elevated temperature and pCO2, and instead led to altered organic matter dynamics, including significantly lower carbon fixation. These findings emphasize the need for further evaluation of multi-stressor interactions to better understand biogeochemical vulnerability, nutrient retention, and ecological functioning in coastal ecosystems undergoing rapid climatic and anthropogenic change.

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Prolonged low pH reprograms carbon and nitrogen metabolism and micronutrient use in Symbiodinium kawagutii and reveals indicators for reef water quality management

Published 23 January 2026 Science Closed
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Highlights

  • Low- pH stress suppresses S. kawagutii growth by ∼50%
  • Enhanced NPQ and reduced chlorophyll indicate increased photoprotection
  • Lipid pools increase as proteins and carbohydrates are diverted to fatty acids
  • Elevated C:N ratios and Fe/Mn loss reveal nutrient limitation under acid stress
  • Multi-omics uncover upregulated CA, antioxidant enzymes, and proton pumps

Abstract

Ocean acidification is a pervasive driver of coastal and reef water-quality change. We investigated how chronic low-pH exposure representative of extreme reef scenarios (pH 7.4-7.5) reshapes the physiology and metabolism of the coral symbiont Symbiodinium kawagutii. Integrating growth assays, photophysiology, ultrastructural imaging, biochemical profiling, transcriptomics, and metabolomics, we show that low pH suppresses growth and redirects resources from biosynthesis to stress mitigation. Non-photochemical quenching increased while chlorophyll content declined, indicating photoprotective energy reallocation. Ultrastructural deterioration coincided with losses of protein and carbohydrate pools, whereas fatty-acid stores expanded, evidencing a shift in carbon storage. Elemental and trace-metal measurements revealed higher cellular C:N and significant Fe/Mn depletion, indicating micronutrient constraints under acid stress. Multi-omics analyses identified coordinated upregulation of carbonic anhydrases, vacuolar H+-ATPases, and antioxidant defenses with downregulation of nitrogen and phosphorus assimilation, forming a plastic network that maintains pH and redox homeostasis at the expense of growth. These cellular trade-offs clarify how symbiont plasticity can buffer acidified conditions while altering the quality and quantity of photosynthate available to hosts. By linking mechanistic responses to potential monitoring indicators, this study provides actionable targets to anticipate and manage acidification impacts on reef water quality and to guide restoration strategies that prioritize acid-tolerant symbiont strains and relief of micronutrient stress.

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Transcriptomic responses of the marine diatom Phaeodactylum tricornutum to high carbon and low nitrogen stress

Published 23 January 2026 Science Closed
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Diatoms play a pivotal role in global biogeochemical cycling and marine primary productivity, making them ideal model organisms for understanding how phytoplankton respond to environmental fluctuations associated with global climate change. In natural marine systems, diatoms frequently encounter simultaneous variations in carbon and nitrogen availability, yet most previous studies have examined the effects of these factors in isolation. To elucidate the integrated transcriptional mechanisms underlying diatom acclimation to coupled carbon–nitrogen (C—N) imbalance, we employed RNA sequencing (RNA‐Seq) to characterize the global transcriptional response of the model diatom Phaeodactylum tricornutum to high CO2 (~2000 μatm) and low nitrogen (10% of nitrogen concentration in f/2 medium) under parallel culture conditions. The results revealed both shared and distinct transcriptional responses between the two treatments. Key genes involved in carbon metabolism, such as phosphoglycerate mutase (PGAM_7) and dihydrolipoamide succinyltransferase (PHATRDRAFT_40430), were significantly upregulated, indicating enhanced glycolytic and TCA cycle activity. In contrast, the Calvin‐cycle enzyme fructose‐1,6‐bisphosphatase (FBPC4) was downregulated. Genes associated with nitrogen assimilation‐including nitrate reductase (PHATRDRAFT_54983), nitrite reductases (PHATRDRAFT_13154, PHATRDRAFT_8155), and ferredoxin–nitrite reductase (PHATRDRAFT_27757)‐were strongly induced under both conditions. Pathway enrichment analysis further indicated the activation of lactic acid fermentation and nitrogen salvage pathways, suggesting a metabolic shift toward energy conservation and nutrient recycling. Collectively, these findings provide an overview of the transcriptional adjustments that enable P. tricornutum to maintain C—N homeostasis under high CO2 and low nitrogen stress, offering new insights into diatom metabolic plasticity under changing ocean conditions.

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Ocean acidification and anthropogenic carbon in the Eastern Mediterranean Sea and the effects of acidification on marine organisms

Published 15 January 2026 Science Closed
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Ocean acidification (OA), driven by rising atmospheric carbon dioxide (CO2) levels, is a critical issue affecting our oceans. The Eastern Mediterranean Sea (EMS) remains poorly understood in terms of the carbonate system and the impact of OA, despite its key role in Levantine Intermediate Water (LIW) formation and its peculiar characteristics in buffering capacity and ongoing OA. This study provides the first comprehensive spatial and temporal assessment of carbonate system in the North-Eastern Levantine Basin, in EMS, providing essential reference data for Total Alkalinity (TA), Dissolved Inorganic Carbon (DIC), and Anthropogenic Carbon (CANT). The mean TA of the measurements was 2622.11 μmol/kg, with higher surface values in summer, reflected also in the surface salinity (S) maximum caused by strong evaporation. A clear vertical gradient was observed, with TA decreasing with depth. Hot and dry meteorological conditions contribute to increased S and TA, resulting in seasonal and vertical variations in the water column. The mean DIC of the measurements was 2291.23 μmol/kg. In contrast to the observations for TA, surface DIC values were higher in winter than in summer. The higher DIC values in winter are attributed to thermodynamic equilibrium and vertical mixing in the surface waters. This study has also investigates the presence of CANT, has infiltrated deep layers, with a mean concentration of 52.07 μmol/kg, decreasing significantly throughout the water column. These findings confirms the ongoing influence of human activities on intermediate and deep layers in EMS. To reconstruct past carbonate system dynamics, the relationships of TA and DIC were determined with salinity (S) and temperature (T) data. Long-term data from METU-IMS Erdemli Time Series (ETS) stations, collected monthly for a decade, provided valuable findings into seasonal patterns and temporal shifts in TA, DIC, and pH. The coastal station displayed clear trends in the carbonate system over time, reflecting its sensitivity to local environmental changes. In contrast, the offshore station exhibited minimal variability, indicating greater stability against seasonal and long-term fluctuations. These results highlight the heightened vulnerability of coastal waters to carbonate system changes, while offshore waters remain more stable. Understanding carbonate chemistry and acidification levels is crucial for assessing impacts on marine life. In addition to the characterization of carbonate chemistry, this study also explores OA’s biological impacts on two key organisms of the Mediterranean ecosystem: phytoplankton and mussels. Firstly, effects of elevated CO₂ on phytoplankton, an essential primary producer in aquatic food webs and global biogeochemical cycles are explored. Specifically, the study explores the impacts on phytoplankton physiology, focusing on growth rates, respiration, and photopigment content in selected species from the coccolithophores, dinoflagellates, and diatoms groups. While growth rates and respiration remained relatively stable under reduced pH conditions, photopigment content was significantly influenced by changes in seawater pH, highlighting the importance of considering environmental influences on photopigment composition. The study further investigated the effects of acidification on calcifying organisms through a global program aimed at understanding the long-term effects of acidification on key seafood species and exploring adaptation strategies with a collaborative approach. This study focused on the long-term (6 months long experiment) physiological impacts of OA on marine calcifiers, specifically Mediterranean mussel, Mytilus galloprovincialis, an abundant species and one of the most consumed non-fish marine species in Türkiye. Results indicate that OA poses a substantial threat to mussel health and survival. Reduced pH levels negatively impacted survival rates, while other physiological parameters like clearance rate, condition index, respiration, and the distribution of a radionuclide, 210Po, did not significantly change. However, lipid content and immune response were affected. Oxygen consumption decreased over time, especially at lower pH. This study underscores the potential risks of OA to the fitness of the commercially important mussel species, indicating that future OA may impact both this key seafood species and its associated ecosystems. The established baseline data are crucial for future monitoring and provide valuable insights into the vulnerability of marine organisms and ecosystems to ongoing OA. By integrating chemical, biological, and ecological perspectives, this dissertation offers a comprehensive assessment of OA in EMS. It establishes baseline data for carbonate system variables, revealing distinct spatial and temporal variations influenced by S, T, and mixing processes. By linking changes in carbonate chemistry to physiological responses in primary producers and a commercially vital shellfish species, this study highlights the ecological and economic impacts of OA in EMS. The findings emphasize the need for continued research and mitigation efforts to protect marine ecosystems and commercially important species. This integrated approach provides valuable insights into the vulnerability of marine organisms and ecosystems to ongoing OA, underscoring the significance of this research for the Mediterranean Sea.

Continue reading ‘Ocean acidification and anthropogenic carbon in the Eastern Mediterranean Sea and the effects of acidification on marine organisms’

Physiological and transcriptomic responses of a harmful algal bloom-causing dinoflagellate Karenia mikimotoi to multiple environmental factors

Published 12 January 2026 Science Closed
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Highlights

  • Elevated temperature was the primary factor significantly reducing K. mikimotoi growth and photosynthesis.
  • Increased pCO₂ and high N: P ratios partially mitigated thermal stress induced by elevated temperature.
  • K. mikimotoi consistently up-regulated energy and lipid metabolism to cope with environmental stressors irrespective of treatment.
  • K. mikimotoi may persist and even thrive under multiple stressors, subsequently influencing productivity and biogeochemical cycles.

Abstract

Dinoflagellates play a crucial role in marine food webs and biogeochemical cycles, yet they are increasingly affected by global environmental changes. While there is limited understanding of their response to individual stressors projected under future oceanic conditions, their response to multiple concurrent environmental stressors remains inadequately explored. This study investigated the singular and interactive effects of elevated temperature (26 °C vs. 22 °C), increased pCO2 (1000 μatm vs. 400 μatm), and a high nitrogen-to-phosphorus ratio (N:P = 180:1 vs. 40:1) on the harmful algal bloom-forming dinoflagellate Karenia mikimotoi over a 40-day exposure period. Among these factors, elevated temperature exerted the most pronounced influence, markedly reducing the cell growth rate and photosynthesis while simultaneously increasing the particulate organic matter content and antioxidant level. Transcriptomic analyses indicated that elevated temperature enhanced the expression of genes associated with oxidative stress, suggesting a potential defense mechanism against thermal stress. Notably, increased pCO2 and a high N:P ratio appeared to mitigate thermal stress to some extent. Irrespective of the treatment, K. mikimotoi demonstrated a consistent response strategy characterized by the synergistic upregulation of energy metabolism and lipid biosynthesis pathways, coordinated by the modulation of both upstream and downstream genes in the tricarboxylic acid cycle. This metabolic reprogramming likely facilitates a more efficient allocation of energy, thereby enhancing the resilience of K. mikimotoi to environmental stress. This study underscores the interactive effects of multiple stressors on marine dinoflagellates, highlighting that elevated temperature is the most critical factor affecting dinoflagellates in future oceanic environments.

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The role of heterotrophy in the response of Oculina arbuscula to ocean acidification

Published 31 December 2025 Science Closed
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On both tropical and temperate reefs, the calcium carbonate skeletons produced by scleractinian corals provide habitat that supports a high biodiversity of fishes and invertebrates. Ocean acidification (OA), driven by excess anthropogenic CO2 uptake, causes declines in seawater pH and carbonate ion concentration and can compromise coral calcification by causing increased energetic demands. Deciphering how corals meet this increased energetic demand is critical to predicting their future persistence. Oculina arbuscula is a facultatively symbiotic temperate coral common on subtropical reefs of the South Atlantic Bight. This coral has demonstrated calcification resilience to reduced pH conditions in both symbiotic and aposymbiotic forms, despite aposymbiotic colonies lacking access to photosynthetically-derived energy. I hypothesized that energy acquired through heterotrophy is a mechanism by which O. arbuscula obtains the resources necessary to overcome the heightened energy demand created by ocean acidification. To investigate the role of heterotrophy, a 90-day laboratory experiment was conducted exposing aposymbiotic O. arbuscula fragments to a pH of either 7.7 or 8.0 under three different feeding levels of Artemia spp. nauplii. Although fragments with greater food consumption showed significantly higher calcification rates, this effect was independent of pH. Similarly, biochemical analyses indicated that total protein and total carbohydrate stores increased with higher food consumption but were unaffected by pH exposure. In contrast, total lipid stores decreased during the experiment, regardless of pH exposure or food level, suggesting the heterotrophic contribution to lipid stores was deficient. Together, these results indicate that while heterotrophically-derived energy may not be a primary mechanism underlying the ability of O. arbuscula to sustain calcification rates under OA stress, this coral species should continue to thrive in an increasingly acidifying ocean as long as heterotrophic food resources are in abundance.

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Compound hypoxia with heat or acidification stress induces synergistic and additive effects on coral physiology

Published 26 December 2025 Science Closed
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As climate change accelerates, coastal marine ecosystems are increasingly exposed to co-occurring stressors whose combined effects are nonlinear and difficult to predict. Deoxygenation is a rapidly intensifying yet underrecognized threat to coral reefs that interacts with heat and acidification to alter coral physiology and stress resilience. However, the effects of hypoxia-related compound events on corals are largely unknown, underscoring the need for multi-stressor studies. Here, we conducted two extended-exposure experiments (12–17 days) across the coral species Porites furcata, Porites astreoides and Siderastrea siderea, to disentangle the individual and combined effects of low dissolved oxygen (hypoxia) with either heat or acidification. We measured eight phenotypic traits related to growth, metabolism, and symbiosis health to test whether hypoxia imposes energetic constraints or other physiological stress that amplify the effects of heat or acidification. Standardized effect size analysis across 24 stressor–trait combinations revealed 13 additive, 10 synergistic, and only one antagonistic response. Hypoxia consistently suppressed dark respiration by 37–49% across species and altered photophysiology in the two Porites species, whereas acidification alone had minimal effects, particularly in S. siderea. Heat stress caused the most pronounced declines across nearly all traits, and when combined with hypoxia, it produced the highest number of synergistic interactions. In contrast, the combination of hypoxia and acidification largely resulted in additive responses, suggesting that independent physiological mechanisms underlie these effects. All corals showed strong metabolic depression under hypoxia which is likely beneficial as a short-term adaptive response but may impose energetic constraints in the long-term. These findings highlight deoxygenation as critical yet often overlooked drivers of coral reef vulnerability. More multi-stressor experiments across a range of species are urgently needed to improve predictions of reef resilience under future ocean conditions, where compound stress events are expected to become more frequent and severe.

Continue reading ‘Compound hypoxia with heat or acidification stress induces synergistic and additive effects on coral physiology’

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