Posts Tagged 'calcification'



Ontogenetic differences in the response of the cold-water coral Caryophyllia huinayensis to ocean acidification, warming and food availability

Highlights

  • Response to multiple stressors differs between cold-water coral life stages.
  • Elevated temperature and reduced feeding have the strongest effect.
  • Highest mortality occurs in adult corals.
  • Calcification rates decrease the most in juvenile corals.
  • Three-month delay in response to changing environmental conditions.

Abstract

Cold-water corals (CWCs) are considered vulnerable to environmental changes. However, previous studies have focused on adult CWCs and mainly investigated the short-term effects of single stressors. So far, the effects of environmental changes on different CWC life stages are unknown, both for single and multiple stressors and over long time periods. Therefore, we conducted a six-month aquarium experiment with three life stages of Caryophyllia huinayensis to study their physiological response (survival, somatic growth, calcification and respiration) to the interactive effects of aragonite saturation (0.8 and 2.5), temperature (11 and 15 °C) and food availability (8 and 87 μg C L−1). The response clearly differed between life stages and measured traits. Elevated temperature and reduced feeding had the greatest effects, pushing the corals to their physiological limits. Highest mortality was observed in adult corals, while calcification rates decreased the most in juveniles. We observed a three-month delay in response, presumably because energy reserves declined, suggesting that short-term experiments overestimate coral resilience. Elevated summer temperatures and reduced food supply are likely to have the greatest impact on live CWCs in the future, leading to reduced coral growth and population shifts due to delayed juvenile maturation and high adult mortality.

Continue reading ‘Ontogenetic differences in the response of the cold-water coral Caryophyllia huinayensis to ocean acidification, warming and food availability’

Constraining oceanic carbonate chemistry evolution during the Cretaceous-Paleogene transition: combined benthic and planktonic calcium isotope records from the equatorial Pacific Ocean

The Mesozoic-Cenozoic transition is a period of biogeochemical cycle perturbations. The strongest of them is the Cretaceous-Paleogene boundary (K-Pg) crisis, characterized by one of the most important extinctions of planktonic marine calcifiers in Earth’s history. One of the primary drivers of this biocalcification crisis is thought to be the increase in atmospheric CO2 concentration and ocean acidification triggered by the Chicxulub Impact, and/or Deccan volcanism. Because it reflects changes of the calcium cycle and/or depends on parameters of the carbonate system, the Ca isotope composition of carbonate minerals precipitated from seawater (44/40Ca) offers the potential to reconstruct some of the environmental changes that occurred. Here we present new high-resolution planktonic and benthic foraminiferal 44/40Ca, 18O, 13C, and Sr/Ca records across the K-Pg transition from Shatsky rise (Leg 198; ODP Site 1209, Hole C). The 44/40Ca record displays a succession of rapid shifts of ca. ‰−0.4‰ across the K-Pg transition. They are similar though not identical between the planktonic and benthic records. These shifts took place on a timescale significantly shorter than the residence time of Ca in the oceans and are therefore unlikely to result from global disequilibrium in the oceanic Ca budget. Instead, changes in the fractionation factor between carbonate minerals and seawater in response to changes in precipitation rates may explain the observed 44/40Ca and Sr/Ca record. The benthic and planktonic 44/40Ca records show a late Maastrichtian and an early Danian negative excursions best explained by a succession of episodes of ocean alkalinity increase related to increased continental weathering caused by CO2 emissions from Deccan volcanism and the aftermath of the K-Pg biocalcification crisis. Carbonate compensation via carbonate sediment dissolution, biological carbonate compensation via reduction of biocalcification, and/or an increase in continental weathering must have occurred to offset the excess CO2, ultimately resulting in rapid changes in ocean carbonate chemistry, in combination with reduced surface alkalinity export in response to the early Paleogene planktonic biomineralization crisis.

Continue reading ‘Constraining oceanic carbonate chemistry evolution during the Cretaceous-Paleogene transition: combined benthic and planktonic calcium isotope records from the equatorial Pacific Ocean’

Model development to assess carbon fluxes during shell formation in blue mussels

In order to quantify the amount of carbonate, precipitated as calcium-carbonate in the shells of blue mussel (Mytilus edulis) in a temperate climate, an existing Dynamic Energy Budget (DEB) model for the blue mussel was adapted by separating shell growth from soft tissue growth. Hereby, two parameters were added to the original DEB-model, a calcification cost [J/mgCaCO3] and an energy allocation fraction [-], which resulted in the energy allocated for structural growth being divided between shell and meat growth. As values for these new parameters were lacking, they were calibrated by fitting the model to field data. Calibration results showed that an Energy allocation fraction of 0.5 and a calcification cost of 0.9 J/mgCaCO3, resulted in the best fit when fitted on 2017 and 2018 field data separately. These values however, show the best fit for data obtained within the first couple of years of the shellfish life, and do not take later years into account. Also it could be discussed that some parameters vary throughout the lifespan of the species. The results were compared to a regular DEB model, where the shell output was calculated through a simple allometric relationship. It is sometimes assumed that the carbon storage in shell material as calcium carbonate could be regarded as a form of carbon sequestration, with a positive impact on the atmospheric CO2 concentrations. However, studies on the physical-chemical processes related to shell formation have shown that from an oceanographic perspective, shell formation should be regarded as a source of atmospheric CO2 rather than a sink. The removal of carbonates, through the biocalcification process, reduces the buffer capacity (alkalinity) of the water to store CO2. As a result CO2 is released from the water to the atmosphere when shell material is formed. The actual amount of CO2 that escapes from the water to the atmosphere as a result of biocalcification depends strongly on local water characteristics. In this study, the effect of calcification by mussels on the CO2 flux to the atmosphere is studied using an adapted DEB model where energy costs of calcification are modelled explicitly. The model was subsequently run under two future climate scenarios, (RCP 4.5 and RCP 8.3) with elevated temperature and decreased pH, and the total released CO2 as a result of shell formation was calculated with the SeaCarb model. This showed growth of mussels, under future climate conditions to be slower, and with that the cumulative shell mass and carbonate precipitated to CaCO3 to decrease. Yet the amount of CO2 released, due to biocalcification, increased. This is due to the fact that the amount of CO2 released/gr of CaCO3 precipitated will be higher, as a result of the decreased buffering capacity of seawater under future climatic environmental conditions.

In summary the conclusions of the project were:

  • Biocalcification (shell formation) of marine organisms, such as bivalves, cannot be regarded as a process resulting in negative CO2 emission to the atmosphere;
  • The actual amount of CO2 that, due to biocalcification, is released from the water to the atmosphere depends on the physicochemical characteristics of the water, which are influenced by (future) climate conditions;
  • Our first model calculations suggest that at future climate conditions mussel’s grow rate will be somewhat reduced. While the amount of CO2 that due to biocalcification, escapes to the atmosphere during its life-time will slightly increase. Making the ratio of g CO2 release/g CaCO3 precipitated slightly higher;
  • Our model calculations should be considered an exercise rather than a definite prediction of how mussels will respond to future climate scenarios. Additional information/experimentation is strongly needed to validate the model settings, and to test the validity of the above mentioned outcome of the model.
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Differences in carbonate chemistry up-regulation of long-lived reef-building corals

With climate projections questioning the future survival of stony corals and their dominance as tropical reef builders, it is critical to understand the adaptive capacity of corals to ongoing climate change. Biological mediation of the carbonate chemistry of the coral calcifying fluid is a fundamental component for assessing the response of corals to global threats. The Tara Pacific expedition (2016–2018) provided an opportunity to investigate calcification patterns in extant corals throughout the Pacific Ocean. Cores from colonies of the massive Porites and Diploastrea genera were collected from different environments to assess calcification parameters of long-lived reef-building corals. At the basin scale of the Pacific Ocean, we show that both genera systematically up-regulate their calcifying fluid pH and dissolved inorganic carbon to achieve efficient skeletal precipitation. However, while Porites corals increase the aragonite saturation state of the calcifying fluid (Ωcf) at higher temperatures to enhance their calcification capacity, Diploastrea show a steady homeostatic Ωcf across the Pacific temperature gradient. Thus, the extent to which Diploastrea responds to ocean warming and/or acidification is unclear, and it deserves further attention whether this is beneficial or detrimental to future survival of this coral genus.

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The effects of ocean change drivers on the ecophysiology of the mottled brittle star Ophionereis fasciata

Global ocean environments are rapidly changing, posing a substantial threat to the viability of marine populations due to the co-occurrence of different changing ocean (CO) drivers, such as ocean warming (OW) and ocean acidification (OA). In order to persist, marine species undergo some combination of acclimation and adaptation in response to these changes. Understanding such responses is essential to measure and predict the magnitude and direction of environmental changes, leading to the development of different approaches to understanding the links and interactions between biological processes and abiotic environmental conditions. A series of long-term mesocosm experiments have been conducted using adult Ophionereis fasciata as a model to investigate the physiological response and trade-offs of marine organisms to ocean acidification, ocean warming and the combined effect of both drivers. A scenario-based approach was adopted to elucidate the primary physiological responses to conditions currently experienced by this species in its tidally influenced habitat (21-24°C and pH 7.75-7.4) as well as changes expected to occur in the near future due to CO (+2.5 ℃ and -0.36 pH by 2100). Long-term exposure to OW and OA conditions affected survival, metabolic rate, regeneration and growth rates, calcification/dissolution and the righting response of O. fasciata. Temperature changes clearly impacted these aspects of the mottled brittle star, while changes in pH had more subtle or no effect. Our results indicate that for most of the assessed ecophysiological traits, there are no significant interactive effects of OA and OW. Moreover, temperature was the dominant driver, with a greater impact regarding the magnitude and quantity of the affected processes. However, the exposure to a combination of high temperature and low pH produced complex responses in terms of survival and calcification/dissolution. Finally, we documented the first report of symbionts associated with O. fasciata: an obligate amphipod parasite and a facultative commensal polychaete. Our findings indicate that the mottled brittle star will need to cope with CO conditions in context with the predictions made for New Zealand waters, with a potential impact on its performance and survival, as well as its distribution and ecological interactions.

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A comparison of SNARF-1 and skeletal δ11B estimates of calcification media pH in tropical coral

Coral skeletal boron geochemistry offers opportunities to probe the pH of the calcification media (pHCM) of modern and fossil specimens, to estimate past changes in seawater pH and to explore the biomineralisation response to future ocean acidification. In this research we grew 2 Stylophora pistillata coral microcolonies over glass coverslips to allow analysis of the pH sensitive dye SNARF-1, in the extracellular calcification medium at the growing edge of colonies where the first aragonite crystals are formed, under both light and dark conditions. We use secondary ion mass spectrometry (SIMS) to measure the boron isotopic composition (δ11B) of the skeleton close to the growth edge after 2 to 3 days of additional calcification had enlarged the crystals until they joined, generating a continuous sheet of aragonite. Mean skeletal δ11B-pHCM estimates are higher than those by SNARF-1 by 0.35–0.44 pH units. These differences either reflect real variations in the pH of the calcification media associated with each measurement technique or indicate other changes in the biomineralisation process which influence skeletal δ11B. SNARF-1 measures directly the pH of the extracellular calcification medium while skeletal δ11B analyses aragonite potentially formed via both extracellular and intracellular biomineralisation pathways. Analysis of a third coral specimen, also growing on a glass slide but with a 5 cm long branch, indicated good agreement between the δ11B value of the apex of the branch and the skeletal growth edge. The tissues overlying both these regions were transparent indicating they had low symbiont densities. This suggests that the biomineralisation process is broadly comparable between these sites and that studies growing corals over glass slides/coverslips provide representative data for the colony apex.

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Succession of ocean acidification and its effects on reef-building corals

Since 2008, we have been conducting a series of coral-rearing experiments, mainly at the Sesoko Station of the Tropical Biosphere Research Center at the University of the Ryukyus, under an overarching project, called the Acidification Impact on Calcifiers project (AICAL project). The AICAL project integrates the efforts of several individual research programs, and project members employ a custom-made, high-precision pCO2-adjusted seawater generator (the AICAL apparatus) to study the effects of ocean acidification on marine calcifying organisms. With this system, rearing experiments can be conducted under conditions mimicking those in the preindustrial era, and the future. In this review, we summarize the results of ocean acidification experiments on corals and other organisms, with a focus on studies conducted by the AICAL project members. We examine the response of organisms to ocean acidification in a hierarchical fashion: differences among various groups of calcifying organisms, and interspecific and intraspecific variation in corals. In the case of corals, we consider not only the effects of ocean acidification, but also those caused by rising seawater temperatures and eutrophication. Our major findings are that coral calcification may have already decreased from a preindustrial level and that there are evident interspecific and intraspecific differences in tolerance against ocean acidification. These findings suggest future decrease of coral cover, accompanied by species compositional changes under climate change scenarios.

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Separate and combined effects of elevated pCO2 and temperature on the branching reef corals Acropora digitifera and Montipora digitata

Ocean acidification (OA) and warming (OW) are major global threats to coral reef ecosystems; however, studies on their combined effects (OA + OW) are scarce. Therefore, we evaluated the effects of OA, OW, and OA + OW in the branching reef corals Acropora digitifera and Montipora digitata, which have been found to respond differently to environmental changes. Our results indicate that OW has a greater impact on A. digitifera and M. digitata than OA and that the former species is more vulnerable to OW than the latter. OW was the main stressor for increased mortality and decreased calcification in the OA + OW group, and the effect of OA + OW was additive in both species. Our findings suggest that the relative abundance and cover of M. digitata are expected to increase whereas those of A. digitifera may decrease in the near future in Okinawa.

Continue reading ‘Separate and combined effects of elevated pCO2 and temperature on the branching reef corals Acropora digitifera and Montipora digitata’

Behavioral and physiological effects of ocean acidification and warming on larvae of a continental shelf bivalve

Highlights

  • Warming and acidification impacts on surfclam larvae were investigated.
  • Warming increased larvae feeding, scope for growth and biomineralization.
  • Warming decreased swimming speed and pelagic larval duration.
  • Acidification increased respiration but reduced immunity and biomineralization.

Abstract

The negative impacts of ocean warming and acidification on bivalve fisheries are well documented but few studies investigate parameters relevant to energy budgets and larval dispersal. This study used laboratory experiments to assess developmental, physiological and behavioral responses to projected climate change scenarios using larval Atlantic surfclams Spisula solidissima solidissima, found in northwest Atlantic Ocean continental shelf waters. Ocean warming increased feeding, scope for growth, and biomineralization, but decreased swimming speed and pelagic larval duration. Ocean acidification increased respiration but reduced immune performance and biomineralization. Growth increased under ocean warming only, but decreased under combined ocean warming and acidification. These results suggest that ocean warming increases metabolic activity and affects larval behavior, while ocean acidification negatively impacts development and physiology. Additionally, principal component analysis demonstrated that growth and biomineralization showed similar response profiles, but inverse response profiles to respiration and swimming speed, suggesting alterations in energy allocation under climate change.

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Ocean acidification increases inorganic carbon over organic carbon in shrimp’s exoskeleton

Highlights

  • PIC: POC ratio in shrimps’ exoskeleton may increase under future OA.
  • Hyper-calcification and increased respiration are possible in shrimps under OA releasing more CO2 into the water.
  • Increased PIC: POC ratio may impact the ecosystem functions as well as the carbon cycle.

Abstract

Ocean acidification (OA) may either increase or have a neutral effect on the calcification in shrimp’s exoskeleton. However, investigations on changes in the carbon composition of shrimp’s exoskeletons under OA are lacking. We exposed juvenile Pacific white shrimps to target pHs of 8.0, 7.9, and 7.6 for 100 days to evaluate changes in carapace thickness, total carbon (TC), particulate organic carbon (POC), particulate inorganic carbon (PIC), calcium, and magnesium concentrations in their exoskeletons. The PIC: POC ratio of shrimp in pH 7.6 treatment was significantly higher by 175 % as compared to pH 8.0 treatment. Thickness and Ca% in pH 7.6 treatment were significantly higher as compared to pH 8.0 treatment (90 % and 65 %, respectively). This is the first direct evidence of an increased PIC: POC ratio in shrimp exoskeletons under OA. In the future, such changes in carbon composition may affect the shrimp population, ecosystem functions, and regional carbon cycle.

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Long-term physiological responses to combined ocean acidification and warming show energetic trade-offs in an asterinid starfish

While organismal responses to climate change and ocean acidification are increasingly documented, longer-term (> a few weeks) experiments with marine organisms are still sparse. However, such experiments are crucial for assessing potential acclimatization mechanisms, as well as predicting species-specific responses to environmental change. Here, we assess the combined effects of elevated pCO2 and temperature on organismal metabolism, mortality, righting activity, and calcification of the coral reef-associated starfish Aquilonastra yairi. Specimens were incubated at two temperature levels (27 °C and 32 °C) crossed with three pCO2 regimes (455 µatm, 1052 µatm, and 2066 µatm) for 90 days. At the end of the experiment, mortality was not altered by temperature and pCO2 treatments. Elevated temperature alone increased metabolic rate, accelerated righting activity, and caused a decline in calcification rate, while high pCO2 increased metabolic rate and reduced calcification rate, but did not affect the righting activity. We document that temperature is the main stressor regulating starfish physiology. However, the combination of high temperature and high pCO2 showed nonlinear and potentially synergistic effects on organismal physiology (e.g., metabolic rate), where the elevated temperature allowed the starfish to better cope with the adverse effect of high pCO2 concentration (low pH) on calcification and reduced skeletal dissolution (antagonistic interactive effects) interpreted as a result of energetic trade-offs.

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Ocean acidification enhances primary productivity and nocturnal carbonate dissolution in intertidal rock pools

Human CO2 emissions are modifying ocean carbonate chemistry, causing ocean acidification, and likely already impacting marine ecosystems. In particular, there is concern that coastal, benthic calcifying organisms will be negatively affected by ocean acidification, a hypothesis largely supported by laboratory studies. The inter-relationships between carbonate chemistry and marine calcifying communities in situ are complex and natural mesocosms such as tidal pools can provide useful community-level insights. In this study, we manipulated the carbonate chemistry of intertidal pools to investigate the influence of future ocean acidification on net community production (NCP) and calcification (NCC) at emersion. Adding CO2 at the start of the tidal emersion to simulate future acidification (+1500 μatm pCO2, target pH: 7.5) modified net production and calcification rates in the pools. By day, pools were fertilized by the increased CO2 (+20 % increase in NCP, from 10 to 12 mmol O2 m−2 hr−1), while there was no measurable impact on NCC. During the night, pools experienced net community dissolution (NCC < 0), even in present-day conditions, when waters were supersaturated with regards to aragonite. Adding CO2 in the pools increased nocturnal dissolution rates by 40 % (from −0.7 to −1.0 mmol CaCO3 m−2 hr−1) with no consistent impact on night community respiration. Our results suggest that ocean acidification is likely to alter temperate intertidal community metabolism on sub-daily timescales, enhancing both diurnal community production and nocturnal calcium carbonate dissolution.

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Sr/Ca in foraminiferal calcite as a proxy for calcifying fluid composition

Foraminifera are unicellular organisms that inhabit the oceans. They play an important role in the global carbon cycle and record valuable paleoclimate information through the uptake of trace elements such as strontium (Sr) into their calcitic (CaCO3) shells. Understanding how foraminifera control their internal fluid composition to make CaCO3 is important for predicting their response to ocean acidification and for reliably interpreting the chemical and isotopic compositions of their shells. Here, we model foraminiferal calcification and strontium partitioning in the benthic foraminifera Cibicides wuellerstorfi and Cibicidoides mundulus based on insights from inorganic calcite experiments. The model reconciles inter-ocean and taxonomic differences in benthic foraminifer Sr/Ca partitioning relationships and enables us to reconstruct the composition of the calcifying fluid. We find that Sr partitioning and mineral growth rates of foraminiferal calcite are not significantly affected by changes in external seawater pH (within 7.8–8.1) and [DIC] (within 2100–2300 µmol/kg) due to a regulated calcite saturation state at the site of shell formation. Such homeostasis of the calcifying fluid could explain why foraminifera have been resilient to changes in ocean carbonate chemistry for more than 500 million years. Nevertheless, our model indicates that past foraminiferal DSr values were lower than its modern value due to overall lower ocean pH and higher seawater temperature during the early and middle Cenozoic.

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Acid times in physiology: a systematic review of the effects of ocean acidification on calcifying invertebrates

The reduction in seawater pH from rising levels of carbon dioxide (CO2) in the oceans has been recognized as an important force shaping the future of marine ecosystems. Therefore, numerous studies have reported the effects of ocean acidification (OA) in different compartments of important animal groups, based on field and/or laboratory observations. Calcifying invertebrates have received considerable attention in recent years. In the present systematic review, we have summarized the physiological responses to OA in coral, echinoderm, mollusk, and crustacean species exposed to predicted ocean acidification conditions in the near future. The Scopus, Web of Science, and PubMed databases were used for the literature search, and 75 articles were obtained based on the inclusion criteria. Six main physiological responses have been reported after exposure to low pH. Growth (21.6%), metabolism (20.8%), and acid-base balance (17.6%) were the most frequent among the phyla, while calcification and growth were the physiological responses most affected by OA (>40%). Studies show that the reduction of pH in the aquatic environment, in general, supports the maintenance of metabolic parameters in invertebrates, with redistribution of energy to biological functions, generating limitations to calcification, which can have severe consequences for the health and survival of these organisms. It should be noted that the OA results are variable, with inter and/or intraspecific differences. In summary, this systematic review offers important scientific evidence for establishing paradigms in the physiology of climate change in addition to gathering valuable information on the subject and future research perspectives.

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Seasonal upwelling conditions modulate the calcification response of a tropical scleractinian coral

Natural processes such as upwelling of deeper-water masses change the physical-chemical conditions of the water column creating localized ocean acidification events that can have an impact on the natural communities. This study was performed in a coral reef system of an archetypical bay within the Tayrona National Natural Park (PNNT) (Colombia), and aimed to quantify net calcification rates of a foundational coral species within a temporal context (6 months) taking into account the dynamics of seasonal upwelling that influence the study area. Net calcification rates of coral fragments were obtained in situ by the alkalinity anomaly technique in short-term incubations (~2.5 h). We found a significant effect of the upwelling on net calcification rates (Gnet) (p < 0.05) with an 42% increase in CaCO3 accretion compared to non-upwelling season. We found an increase in total alkalinity (AT) and dissolved inorganic carbon (DIC) with decreased aragonite saturation (Ωara) for the upwelling months, indicating an influence of the Subtropical Under Water mass (SAW) in the PNNT coral community. Significant negative correlations between net calcification with temperature and Ωara, which indicates a positive response of M. auretenra with the upwelling conditions, thus, acting as “enhancer” of resilience for coral calcification.

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Morpho-anatomical, and chemical characterization of some calcareous Mediterranean red algae species

Climatic changes are anticipated to have a detrimental effect on calcifying marine species. Calcareous red algae may be especially vulnerable to seasonal variations since they are common and essential biologically, but there is little research on the morpho-anatomical, and chemical characterization of such species. This study conducted the seasonal investigation of the three dominant Mediterranean calcified red algae. Morphological and 18S rRNA analysis confirmed the identification of collected species as Corallina officinalis, Jania rubens, and Amphiroa rigida. In general, C. officinalis was represented in the four seasons and flourishing maximum in autumn (70% of total species individuals). While J. rubens species was represented in winter, autumn, and spring and completely absent in summer. A. rigida was abundant only in the summer season by 40%. A full morphological and anatomical description of these species were examined, and their chemical compositions (carbohydrate, protein, lipid, pigments, and elements content) were assessed in different seasons, where carbohydrates were the dominant accumulates followed by proteins and lipids. Pearson correlation analysis confirmed a positive correlation between salinity level and nitrogenous nutrients of the seawater with the pigment contents (phycobiliproteins, carotenoids, and chlorophyll a) of the studied seaweeds. The results proved that calcified red algae were able to deposit a mixture of calcium carbonates such as calcite, vaterite, calcium oxalate, calcite-III I calcium carbonate, and aragonite in variable forms depending on the species.

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From marine snails to marine spatial planning : the science of human impacts and relationships with marine ecosystems

Extractive human systems are driving unprecedented biodiversity loss and exacerbating social inequity. The magnitude of the intertwined climate, biodiversity, and social inequity crises has prompted the development of interdisciplinary research approaches to address these complex problems. One such approach, social-ecological systems (SES), aims to understand the relationships between coupled human and ecological systems. This thesis applies an SES lens to understand the science of human impacts on and relationships with marine ecosystems and inform characterizations of system vulnerability. First, I examined the sensitivity of marine ectothermic animals to climate change by conducting a meta-analysis of the effects of ocean acidification and warming. My synthesis of nearly five hundred factorial studies demonstrates the negative effects of these two drivers, identifies specific taxonomic groups (molluscs), life- history traits (adults, sessile), and latitudes (tropical and temperate) that are more sensitive, and refutes two common assumptions about the drivers’ interactive effects. Next, I tested whether populations of a marine snail vary in their vulnerability to ocean warming based on thermal sensitivity and local rates of ocean warming. Using coupled lab and field experiments with snails from two regions in the middle of their range that differ in thermal characteristics, I found that snails from the warmer Salish Sea, an urban sea, showed greater vulnerability to ocean warming than those from the cooler central coast of British Columbia, Canada. Finally, to inform how humans can mitigate our impacts while sustaining complex relationships with the ocean, I partnered with the Sḵwx̲wú7mesh Úxwumixw (Squamish Nation) and regional stewardship organizations on a marine spatial planning project in the Salish Sea. I employed a mixed- methods community-based participatory mapping approach to characterize place-based values and outline opportunities to decolonize research and mapping processes. The results contribute important social data about place-based values, reveal value interactions, reflect knowledge system plurality, and identify avenues to advance reconciliation. Overall, this thesis highlights the vulnerability of marine life, particularly life within urban seas, to climate change and provides a roadmap for researchers and decision-makers to meaningfully steward the health and well-being of coastal social-ecological systems.

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Sterols, free fatty acids, and total fatty acid content in the massive Porites spp. corals cultured under different pCO2 and temperature treatments

Lipids may serve as energy reserves to support coral calcification, allow acclimation to higher temperatures, and are implicated in the control of CaCO3 precipitation. Here, we report the lipid composition of the soft tissues (including host and symbionts) of 7 massive Porites spp. coral colonies (4 × P. lutea and 3 × P. murrayensis), which were cultured under different pCO2 concentrations (180, 260, 400 and 750 µatm) and at two temperatures (25 ℃ and 28 ℃), below the thermal stress threshold. We report the fatty acid methyl esters (FAME), free fatty acid (FFA) to total fatty acid content, sterol and wax ester profiles, and identify two ketones (n-alkanone) and three long chain aldehyde (n-alkanal) derivatives. Increasing seawater temperature significantly increases the contributions of FFAs to the total lipids, of C18:2 and C20:0 to the total FFA pool, of C14:0 to total FAME, and of campesterol to total sterol. The temperature increase also reduces the contributions of unusual fatty acid derivatives to total lipids, of C14:0, C15:0, C16:0 and C17:0 saturated free fatty acids to total FFAs, and of C16:0 FA to total FAME. Fatty acids are implicated in the control of membrane structure fluidity and the observed changes may promote acclimation and thermostability as temperature varies. Seawater pCO2 has no significant effect on the composition of tissue lipids with the exception that the contribution of C14:0 FA to total lipid content is significantly lower at 180 µatm compared to 260 and 750 µatm. Decreased contribution of total sterols and unusual fatty acid derivatives and increased contribution of total FFAs to total lipids are observed in the fastest calcifying coral (a P. lutea specimen) compared to the other corals, under all pCO2 and temperature conditions. Although a rapid calcifier this genotype has been shown previously to exhibit pronounced abnormal changes in skeletal morphology in response to decreased seawater pCO2. Variations in tissue lipid composition between coral genotypes may influence their resilience to future climate change.

Continue reading ‘Sterols, free fatty acids, and total fatty acid content in the massive Porites spp. corals cultured under different pCO2 and temperature treatments’

Oyster biomineralisation in acidifying oceans: from genes to shells

Biomineralisation is the process of biologically controlled shell fabrication in marine calcifiers including edible oysters where shell matrix proteins and organic molecules secreted by mantle tissue controls calcium carbonate nucleation, crystallisation, growth, and mechanical properties. It is also one of the key processes that is notably affected in marine calcifiers under human induced environmental stressor, ocean acidification (OA). Understanding molecular changes in the biomineralisation process under OA, therefore, is key to developing conservation strategies for protecting ecologically and economically important oyster species. In this PhD thesis, I have presented hierarchical analyses of biomineralisation mechanisms of Crassostrea hongkongensis (Hong Kong oysters) under OA. The hierarchical analyses include study of changes in DNA methylation and gene expression of mantle tissue of juvenile Hong Kong oysters under OA. On top of studying molecular changes, this study also has incorporated shell mechanical properties in terms of micro-structure, shell crystal orientation and micro-hardness. In addition to juveniles, larvae which are known to be sensitive to OA than juveniles and adults, were also studied for understanding their shell fabrication capacity under OA. This study is also the first to attempt characterisation of shell proteome changes in an oyster species under OA. The results indicate moderate resilience of Hong Kong oyster biomineralisation to OA. Specifically, calcium binding or signalling related genes were subtly differentially expressed in mantle under OA, with no correlation between gene expression and DNA methylation changes. Hong Kong oysters were able to make unimpaired shells in terms of micro-structure and nanostructure (crystal orientation) in both larval and juvenile stages. We conclude that OA would be still a dissolution problem for resilient species such as Hong Kong oysters despite the organism’s ability to make error free shells under OA. We also define the concept directional dissolution – where shell dissolution is directional from hinge to shell edge; and from outer periostracum to inner layers. Ecologists can adapt the directional dissolution concept for accurate use of shell dissolution as a parameter for OA biomonitoring. This thesis will be of interest not only to marine molecular biologists and ecologists but also to material scientists who are interested in biomimetic material designing.

Continue reading ‘Oyster biomineralisation in acidifying oceans: from genes to shells’

Deep resilience: an evolutionary perspective on calcification in an age of ocean acidification

The success of today’s calcifying organisms in tomorrow’s oceans depends, in part, on the resilience of their skeletons to ocean acidification. To the extent this statement is true there is reason to have hope. Many marine calcifiers demonstrate resilience when exposed to environments that mimic near-term ocean acidification. The fossil record similarly suggests that resilience in skeletons has increased dramatically over geologic time. This “deep resilience” is seen in the long-term stability of skeletal chemistry, as well as a decreasing correlation between skeletal mineralogy and extinction risk over time. Such resilience over geologic timescales is often attributed to genetic canalization—the hardening of genetic pathways due to the evolution of increasingly complex regulatory systems. But paradoxically, our current knowledge on biomineralization genetics suggests an opposing trend, where genes are co-opted and shuffled at an evolutionarily rapid pace. In this paper we consider two possible mechanisms driving deep resilience in skeletons that fall outside of genetic canalization: microbial co-regulation and macroevolutionary trends in skeleton structure. The mechanisms driving deep resilience should be considered when creating risk assessments for marine organisms facing ocean acidification and provide a wealth of research avenues to explore.

Continue reading ‘Deep resilience: an evolutionary perspective on calcification in an age of ocean acidification’

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