As the balance between erosional and constructive processes on coral reefs tilts in favor of framework loss under human-induced local and global change, many reef habitats worldwide degrade and flatten. The resultant generation of coral rubble and the beds they form can have lasting effects on reef communities and structural complexity, threatening the continuity of reef ecological functions and the services they provide. To comprehensively capture changing framework processes and predict their evolution in the context of climate change, heavily colonized rubble fragments were exposed to ocean acidification (OA) conditions for 55 days. Controlled diurnal pH oscillations were incorporated in the treatments to account for the known impact of diel carbonate chemistry fluctuations on calcification and dissolution response to OA. Scenarios included contemporary pH (8.05 ± 0.025 diel fluctuation), elevated OA (7.90 ± 0.025), and high OA (7.70 ± 0.025). We used a multifaceted approach, combining chemical flux analyses, mass alteration measurements, and computed tomography scanning images to measure total and chemical bioerosion, as well as chemically driven secondary calcification. Rates of net carbonate loss measured in the contemporary conditions (1.36 kg m−2 year−1) were high compared to literature and increased in OA scenarios (elevated: 1.84 kg m−2 year−1 and high: 1.59 kg m−2 year−1). The acceleration of these rates was driven by enhanced chemical dissolution and reduced secondary calcification. Further analysis revealed that the extent of these changes was contingent on the density of the coral skeleton, in which the micro- and macroborer communities reside. Findings indicated that increased mechanical bioerosion rates occurred in rubble with lower skeletal density, which is of note considering that corals form lower-density skeletons under OA. These direct and indirect effects of OA on chemical and mechanical framework-altering processes will influence the permanence of this crucial habitat, carrying implications for biodiversity and reef ecosystem function.
Continue reading ‘Rubble persistence under ocean acidification threatened by accelerated bioerosion and lower-density coral skeletons’Posts Tagged 'primary production'
Rubble persistence under ocean acidification threatened by accelerated bioerosion and lower-density coral skeletons
Published 20 June 2024 Science ClosedTags: abundance, biological response, BRcommunity, calcification, chemistry, community composition, corals, dissolution, laboratory, morphology, North Atlantic, otherprocess, primary production, protists, respiration
Impacts of climate change on the Ascension Island marine protected area and its ecosystem services
Published 8 May 2024 Science ClosedTags: chemistry, modeling, primary production, regionalmodeling
Abstract
This is the first projection of marine circulation and biogeochemistry for the Ascension Island Marine Protected Area (AIMPA). Marine Protected Areas are a key management tool used to safeguard biodiversity, but their efficacy is increasingly threatened by climate change. To assess an MPA’s vulnerability to climate change and predict biological responses, we must first project how the local marine environment will change. We present the projections of an ensemble from the Sixth Coupled Model Intercomparision Project. Relative to the recent past (2000–2010), the multi-model means of the mid-century (2040–2050) project that the AIMPA will become warmer (+0.9 to +1.2°C), more saline (+0.01 to +0.10), with a shallower mixed layer depth (−1.3 to −0.8 m), a weaker Atlantic Equatorial Undercurrent (AEU) (−1.5 to −0.4 Sv), more acidic (−0.10 to −0.07), with lower surface nutrient concentrations (−0.023 to −0.0141 mmol N m−3 and −0.013 to −0.009 mmol P m−3), less chlorophyll (−6 to −3 µg m−3) and less primary production (−0.31 to −0.20 mol m−2 yr−1). These changes are often more extreme in the scenarios with higher greenhouse gases emissions and more significant climate change. Using the multi-model mean for two scenarios in the years 2090–2100, we assessed how five key ecosystem services in both the shallow subtidal and the pelagic zone were likely to be impacted by climate change. Both low and high emission scenarios project significant changes to the AIMPA, and it is likely that the provision of several ecosystem services will be negatively impacted.
Plain Language Summary
Ascension Island is a small remote volcanic island in the equatorial Atlantic Ocean. The seas around Ascension Island have been protected from commercial fishing since 2019. We used the marine component of computer simulations of the Earth’s climate to try to understand the future of the Ascension Island Marine Protected Area (AIMPA). Over the next century, the AIMPA region will become warmer, more saline, more acidic, less productive, and with lower nutrient and chlorophyll concentrations in the surface waters. The most important current of the region, the Atlantic Equatorial Current, is also projected to weaken in all scenarios. These changes are likely to negatively impact the ability of the AIMPA to provide ecosystem services such as healthy ecosystems, fish stocks, the removal of carbon dioxide from the air, and attract tourism. This work is important because it is the first projection of the climate around the AIMPA since it was created, and it has allowed local policymakers to understand how the changing climate is likely to affect their environment and ecosystem services.
Key Points
- We present the first projection of the future marine circulation and biogeochemistry of the Ascension Island Marine Protected Area (AIMPA)
- The AIMPA will become warmer, more saline, more acidic, with less surface nutrients, primary production and chlorophyll
- The AIMPA’s capacity to provide ecosystem services will be significantly negatively impacted under a high emission scenario
Ocean acidification and food availability impacts on the metabolism and grazing in a cosmopolitan herbivorous protist Oxyrrhis marina
Published 8 March 2024 Science ClosedTags: abundance, biological response, growth, laboratory, multiple factors, North Pacific, nutrients, otherprocess, performance, physiology, primary production, protists, respiration, zooplankton
The heterotrophic dinoflagellate Oxyrrhis marina is an essential microzooplankton in coastal waters, linking the energy transfer from phytoplankton to higher trophic levels. It is of general significance to investigate how it responds and acclimates to ocean acidification (OA), especially under varied availabilities of food. Here, O. marina was exposed and acclimated to three pCO2 levels (LC: 415, MC:1000, HC:1500 μatm) for 60 days, and then was further grown under the CO2 levels with different levels of food (the microalgae Dunaliella salina) availability for about 8 generations. The OA treatments did not significantly hamper its growth and ingestion rates even under the reduced food availability and starvation (deprived of the microalgae), which significantly reduced its growth rate. While the impacts of OA on the growth and ingestion rates of O. marina were insignificant, the OA treatments appeared to have resulted in a faster decline of the heterotrophic dinoflagellate cells during the starvation period. Nevertheless, the acidic stress under the elevated pCO2 of 1000 or 1500 μatm decreased its respiration by about 53% or 59% with the high and by about 26% or 23% with the low food availability, respectively. Such OA-repressed respiration was also significant during the starvation period. On the other hand, the OA treatments and deprivation of the microalgae synergistically reduced the cellular quota of particulate organic C, N and P, resulting in a reduction of food value of the heterotrophic dinoflagellate as prey. In conclusion, our results show that O. marina is highly resilient to future ocean acidification by reducing its respiration and sustaining its ingestion of microalgae.
Continue reading ‘Ocean acidification and food availability impacts on the metabolism and grazing in a cosmopolitan herbivorous protist Oxyrrhis marina’Effect of increased pCO2 and temperature on the phytoplankton community in the coastal of Yellow Sea
Published 26 February 2024 Science ClosedTags: abundance, biological response, BRcommunity, community composition, growth, laboratory, multiple factors, North Pacific, otherprocess, physiology, phytoplankton, primary production, temperature
Highlights
- Elevated pCO2 and temperature impact phytoplankton abundance and structure.
- High temperature boosts phytoplankton growth.
- Species vary in response to pCO2 and temperature.

Abstract
In order to study the dynamics of marine phytoplankton communities in response to anticipated in temperature and CO2, a shipboard continuous culture experiment (Ecostat) was conducted. The experiment involved simulations under current atmospheric CO2 concentrations (400 ppm) and projected year-2100 CO2 levels (1000 ppm), as well as varying temperature under present (22 °C) versus increased temperature (26 °C) in the Yellow Sea during the summer of 2020. The results showed that both the increased pCO2 and temperature had significant effects on microphytoplankton and picophytoplankton, with the warming effect proving to be more significant. The different responses of various species to acidification and warming and their coupling effect led to the changes in microphytoplankton and picophytoplankton community structure. Elevated temperature and greenhouse treatments promoted the growth of dominant diatoms and Synechococcus, such as Guinardia flaccida and Pseudo-nitzschia delicatissima. This phenomenons widened the ecological niche, and the changes in the growth patterns of dominant species consequently influenced the content of cellular elements. Mantel’s analysis further demonstrated that both warming and greenhouse promoted the growth of diatoms and Synechococcus. Projections of marine phytoplankton community trends by the end of the century based on Growth Rate Ratio (GRR), indicated that not only would species with GRR < 1 decrease, but also numerous species with growth rates >1 at elevated pCO2 levels would be ousted from competition. This experiment demonstrates the need to investigate whether extended exposure to increased pCO2 and temperature over more extended time scales would similarly induce shifts in the biological and biogeochemical dynamics of the Yellow Sea.
Continue reading ‘Effect of increased pCO2 and temperature on the phytoplankton community in the coastal of Yellow Sea’Adaptive mechanism of the marine bacterium Pseudomonas sihuiensis-BFB-6S towards pCO2 variation: insights into synthesis of extracellular polymeric substances and physiochemical modulation
Published 26 February 2024 Science ClosedTags: biological response, BRcommunity, Indian, laboratory, physiology, primary production, prokaryotes
Highlights
- Optimal biofilm modulation can provide the adaptive response of bacteria.
- Potential characterization of EPS explored by microscopic and spectroscopic annotation.
- Modulation of EPS is a hallmark of the protection barrier.
- High concentration of pCO2 can trigger protein-less EPS release.

Abstract
Marine bacteria can adapt to various extreme environments by the production of extracellular polymeric substances (EPS). Throughout this investigation, impact of variable pCO2 levels on the metabolic activity and physiochemical modulation in EPS matrix of marine bacterium Pseudomonas sihuiensis – BFB-6S was evaluated using a fluorescence microscope, excitation-emission matrix (EEM), 2D-Fourier transform infrared correlation spectroscopy (2D-ATR-FTIR-COS), FT-NMR and TGA-DSC. From the results at higher pCO2 levels, there was a substantial reduction in EPS production by 58–62.8 % (DW). In addition to the biochemical composition of EPS, reduction in carbohydrates (8.7–47.6 %), protein (7.1–91.5 %), and lipids (16.9–68.6 %) content were observed at higher pCO2 levels. Functional discrepancies of fluorophores (tyrosine and tryptophan-like) in EPS, speckled differently in response to variable pCO2. The 2D-ATR-FTIR-COS analysis revealed functional amides (C
N, C
C, C
O bending, -NH bending in amines) of EPS were preferentially altered, which led to the domination of polysaccharides relevant functional groups at higher pCO2. 1H NMR analysis of EPS confirmed the absence of chemical signals from H-C-COOH of proteins, α, β anomeric protons, and acetyl group relevant region at higher pCO2 levels. These findings can contribute new insights into the influence of pCO2 on the adaptation of marine microbes in future ocean acidification scenarios.
Effects of year-long exposure to elevated pCO2 on the metabolism of back reef and fore reef communities
Published 16 February 2024 Science ClosedTags: abundance, biological response, BRcommunity, calcification, corals, dissolution, field, otherprocess, primary production, South Pacific
The implications of ocean acidification are acute for calcifying organisms, notably tropical reef corals, for which accretion generally is depressed and dissolution enhanced at reduced seawater pH. We describe year-long experiments in which back reef and fore reef (17-m depth) communities from Moorea, French Polynesia, were incubated outdoors under pCO2 regimes reflecting endpoints of representative concentration pathways (RCPs) expected by the end the century. Incubations were completed in three to four flumes (5.0 × 0.3 m, 500 L) in which seawater was refreshed and circulated at 0.1 m s−1, and the response of the communities was evaluated monthly by measurements of net community calcification (NCC) and net community productivity (NCP). For both communities, NCC (but not NCP) was affected by treatments and time, with NCC declining with increasing pCO2, and for the fore reef, becoming negative (i.e., dissolution was occurring) at the highest pCO2 (1067–1433 μatm, RCP8.5). There was scant evidence of community adjustment to reduce the negative effects of ocean acidification, and inhibition of NCC intensified in the back reef as the abundance of massive Porites spp. declined. These results highlight the risks of dissolution under ocean acidification for coral reefs and suggest these effects will be most acute in fore reef habitats. Without signs of amelioration of the negative effects of ocean acidification during year-long experiments, it is reasonable to expect that the future of coral reefs in acidic seas can be predicted from their current known susceptibility to ocean acidification.
Continue reading ‘Effects of year-long exposure to elevated pCO2 on the metabolism of back reef and fore reef communities’Physiological responses of Caulerpa spp. (with different dissolved inorganic carbon physiologies) to ocean acidification
Published 1 February 2024 Science ClosedTags: algae, biological response, growth, laboratory, photosynthesis, physiology, primary production, South Pacific
Caulerpa is a widely distributed genus of chlorophytes (green macroalgae) which are important for their dietary, social and coastal ecosystem value. Ocean acidification (OA) threatens the future of marine ecosystems, favouring macroalgal species that could benefit from increased seawater carbon dioxide (CO2) concentrations. Most macroalgae species possess CO2 concentrating mechanisms (CCMs) that allow active uptake of bicarbonate (HCO3−). Those species without CCMs are restricted to using CO2, which is currently the least abundant species of dissolved inorganic carbon (DIC) in seawater. Thus, macroalgae without CCMs are predicted to be likely benefit from OA. Caulerpa is one of the rare few genera that have species both with and without CCMs. The two most common Caulerpa species in New Zealand are C. geminata (possesses a CCM) and C. brownii (non-CCM). We investigated the responses of growth, photo-physiology and DIC utilisation of C. geminata and C. brownii to four mean seawater pH treatments (8.03, 7.93, 7.83 and 7.63) that correspond to changes in pH driven by increases in pCO2 simulating future OA. There was a tendency for the mean growth rates for C. brownii (non-CCM) to increase under lower pH, and the growth rates of C. geminata (CCM) to decline with lower pH, although this was not statistically significant. However, this is likely because variability in growth rates also increased as seawater pH declined. There were few other differences in physiology of both species with pH, although there was tendency for greater preference for CO2 over HCO3− uptake in the CCM species with declining seawater pH. This study demonstrates that DIC-use alone does not predict macroalgal responses to OA.
Continue reading ‘Physiological responses of Caulerpa spp. (with different dissolved inorganic carbon physiologies) to ocean acidification’Adaptive responses of eelgrass (Zostera marina L.) to ocean warming and acidification
Published 21 December 2023 Science ClosedTags: biological response, laboratory, molecular biology, morphology, multiple factors, North Pacific, phanerogams, physiology, primary production, temperature
Highlights
- Ocean warming (OW) and acidification (OA) affect seagrass stability.
- Zostera marina L.’s response to OW and OA was studied using multi-omics analysis.
- Plant performance varied under different OW and OA combinations.
- OA’s effects on genes and metabolism depended on temperature.
- OA and OW interactions triggered diverse metabolic shifts in Z. marina.
Abstract
Ocean warming (OW) and ocean acidification (OA), driven by rapid global warming accelerating at unprecedented rates, are profoundly impacting the stability of seagrass ecosystems. Yet, our current understanding of the effects of OW and OA on seagrass remains constrained. Herein, we investigated the response of eelgrass (Zostera marina L.), a representative seagrass species, to OW and OA through comprehensive transcriptomic and metabolomic analyses. The results showed notable variations in plant performance under varying conditions: OW, OA, and OWA (a combination of both conditions). Specifically, under average oceanic temperature conditions for eelgrass growth over the past 20 years —from May to November—OA promoted the production of differentially expressed genes and metabolites associated with alanine, aspartate, and glutamate metabolism, as well as starch and sucrose metabolism. Under warming condition, eelgrass was resistant to OA by accelerating galactose metabolism, along with glycine, serine, and threonine metabolism, as well as the tricarboxylic acid (TCA) cycle. Under the combined OW and OA condition, eelgrass stimulated fructose and mannose metabolism, glycolysis, and carbon fixation, in addition to galactose metabolism and the TCA cycle to face the interplay. Our findings suggest that eelgrass exhibits adaptive capacity by inducing different metabolites and associated genes, primarily connected with carbon and nitrogen metabolism, in response to varying degrees of OW and OA. The data generated here support the exploration of mechanisms underlying seagrass responses to environmental fluctuations, which hold critical significance for the future conservation and management of these ecosystems.
Continue reading ‘Adaptive responses of eelgrass (Zostera marina L.) to ocean warming and acidification’Future warming stimulates growth and photosynthesis in an Arctic microalga more strongly than changes in light intensity or pCO2
Published 20 December 2023 Science ClosedTags: Arctic, biological response, growth, laboratory, light, multiple factors, photosynthesis, physiology, phytoplankton, primary production, temperature
We assessed the responses of solitary cells of Arctic Phaeocystis pouchetii grown under a matrix of temperature (2°C vs. 6°C), light intensity (55 vs. 160 μmol photons m−2 s−1) and pCO2 (400 vs. 1000 μatm CO2, i.e., 40.5 vs. 101.3 Pa). Next to acclimation parameters (growth rates, particulate and dissolved organic C and N, Chlorophyll a content), we measured physiological processes in vivo (electron transport rates and net photosynthesis) using fast-repetition rate fluorometry and membrane-inlet mass spectrometry. Within the applied driver ranges, elevated temperature had the most pronounced impacts, significantly increasing growth, elemental quotas and photosynthetic performance. Light stimulations manifested more prominently under 6°C, underlining temperature’s role as a “master-variable”. pCO2 was the least effective driver, exerting mostly insignificant effects. The obtained data were used for a simplistic upscaling simulation to investigate potential changes in P. pouchetii‘s bloom dynamics in the Fram Strait with increasing temperatures over the 21st century. Although solitary cells might not be fully representative of colonial cells commonly observed in the field, our results suggest that global warming accelerates bloom dynamics, with earlier onsets of blooms and higher peak biomasses. Such a temperature-induced acceleration in the phenology of Phaeocystis and likely other Arctic phytoplankton might cause temporal mismatches, e.g., with the development of grazers, and therefore substantially affect the biogeochemistry and ecology of the Arctic.
Continue reading ‘Future warming stimulates growth and photosynthesis in an Arctic microalga more strongly than changes in light intensity or pCO2’The appendicularian Oikopleura dioica can enhance carbon export in a high CO2 ocean
Published 18 December 2023 Science ClosedTags: abundance, biogeochemistry, biological response, field, mesocosms, North Pacific, otherprocess, performance, phytoplankton, primary production, reproduction, zooplankton
Gelatinous zooplankton are increasingly recognized to play a key role in the ocean’s biological carbon pump. Appendicularians, a class of pelagic tunicates, are among the most abundant gelatinous plankton in the ocean, but it is an open question how their contribution to carbon export might change in the future. Here, we conducted an experiment with large volume in situ mesocosms (~55–60 m3 and 21 m depth) to investigate how ocean acidification (OA) extreme events affect food web structure and carbon export in a natural plankton community, particularly focusing on the keystone species Oikopleura dioica, a globally abundant appendicularian. We found a profound influence of O. dioica on vertical carbon fluxes, particularly during a short but intense bloom period in the high CO2 treatment, during which carbon export was 42%–64% higher than under ambient conditions. This elevated flux was mostly driven by an almost twofold increase in O. dioica biomass under high CO2. This rapid population increase was linked to enhanced fecundity (+20%) that likely resulted from physiological benefits of low pH conditions. The resulting competitive advantage of O. dioica resulted in enhanced grazing on phytoplankton and transfer of this consumed biomass into sinking particles. Using a simple carbon flux model for O. dioica, we estimate that high CO2 doubled the carbon flux of discarded mucous houses and fecal pellets, accounting for up to 39% of total carbon export from the ecosystem during the bloom. Considering the wide geographic distribution of O. dioica, our findings suggest that appendicularians may become an increasingly important vector of carbon export with ongoing OA.
Continue reading ‘The appendicularian Oikopleura dioica can enhance carbon export in a high CO2 ocean’Higher temperature, increased CO2, and changing nutrient ratios alter the carbon metabolism and induce oxidative stress in a cosmopolitan diatom
Published 8 December 2023 Science ClosedTags: biological response, growth, laboratory, multiple factors, North Atlantic, nutrients, photosynthesis, physiology, phytoplankton, primary production, respiration, temperature
Phytoplankton are responsible for about 90% of the oceanic primary production, largely supporting marine food webs, and actively contributing to the biogeochemical cycling of carbon. Yet, increasing temperature and pCO2, along with higher dissolved nitrogen: phosphorus ratios in coastal waters are likely to impact phytoplankton physiology, especially in terms of photosynthetic rate, respiration, and dissolved organic carbon (DOC) production. Here, we conducted a full-factorial experiment to identify the individual and combined effects of temperature, pCO2, and N : P ratio on the antioxidant capacity and carbon metabolism of the diatom Phaeodactylum tricornutum. Our results demonstrate that, among these three drivers, temperature is the most influential factor on the physiology of this species, with warming causing oxidative stress and lower activity of antioxidant enzymes. Furthermore, the photosynthetic rate was higher under warmer conditions and higher pCO2, and, together with a lower dark respiration rate and higher DOC exudation, generated cells with lower carbon content. An enhanced oceanic CO2 uptake and an overall stimulated microbial loop benefiting from higher DOC exudation are potential longer-term consequences of rising temperatures, elevated pCO2 as well as shifted dissolved N : P ratios.
Continue reading ‘Higher temperature, increased CO2, and changing nutrient ratios alter the carbon metabolism and induce oxidative stress in a cosmopolitan diatom’Effects of ocean acidification on growth and photophysiology of two tropical reef macroalgae
Published 28 November 2023 Science ClosedTags: algae, biological response, calcification, chemistry, field, morphology, North Atlantic, photosynthesis, primary production, respiration
Macroalgae can modify coral reef community structure and ecosystem function through a variety of mechanisms, including mediation of biogeochemistry through photosynthesis and the associated production of dissolved organic carbon (DOC). Ocean acidification has the potential to fuel macroalgal growth and photosynthesis and alter DOC production, but responses across taxa and regions are widely varied and difficult to predict. Focusing on algal taxa from two different functional groups on Caribbean coral reefs, we exposed fleshy (Dictyota spp.) and calcifying (Halimeda tuna) macroalgae to ambient and low seawater pH for 25 days in an outdoor experimental system in the Florida Keys. We quantified algal growth, calcification, photophysiology, and DOC production across pH treatments. We observed no significant differences in the growth or photophysiology of either species between treatments, except for lower chlorophyll b concentrations in Dictyota spp. in response to low pH. We were unable to quantify changes in DOC production. The tolerance of Dictyota and Halimeda to near-future seawater carbonate chemistry and stability of photophysiology, suggests that acidification alone is unlikely to change biogeochemical processes associated with algal photosynthesis in these species. Additional research is needed to fully understand how taxa from these functional groups sourced from a wide range of environmental conditions regulate photosynthesis (via carbon uptake strategies) and how this impacts their DOC production. Understanding these species-specific responses to future acidification will allow us to more accurately model and predict the indirect impacts of macroalgae on coral health and reef ecosystem processes.
Continue reading ‘Effects of ocean acidification on growth and photophysiology of two tropical reef macroalgae’Microbial associates of an endemic Mediterranean seagrass enhance the access of the host and the surrounding seawater to inorganic nitrogen under ocean acidification
Published 21 November 2023 Science ClosedTags: biogeochemistry, biological response, BRcommunity, field, Mediterranean, molecular biology, nitrogen fixation, otherprocess, phanerogams, physiology, primary production, prokaryotes, vents
Seagrasses are important primary producers in oceans worldwide. They live in shallow coastal waters that are experiencing carbon dioxide enrichment and ocean acidification. Posidonia oceanica, an endemic seagrass species that dominates the Mediterranean Sea, achieves high abundances in seawater with relatively low concentrations of dissolved inorganic nitrogen. Here we tested whether microbial metabolisms associated with P. oceanica and surrounding seawater enhance seagrass access to nitrogen. Using stable isotope enrichments of intact seagrass with amino acids, we showed that ammonification by free-living and seagrass-associated microbes produce ammonium that is likely used by seagrass and surrounding particulate organic matter. Metagenomic analysis of the epiphytic biofilm on the blades and rhizomes support the ubiquity of microbial ammonification genes in this system. Further, we leveraged the presence of natural carbon dioxide vents and show that the presence of P. oceanica enhanced the uptake of nitrogen by water column particulate organic matter, increasing carbon fixation by a factor of 8.6–17.4 with the greatest effect at CO2 vent sites. However, microbial ammonification was reduced at lower pH, suggesting that future ocean climate change will compromise this microbial process. Thus, the seagrass holobiont enhances water column productivity, even in the context of ocean acidification.
Continue reading ‘Microbial associates of an endemic Mediterranean seagrass enhance the access of the host and the surrounding seawater to inorganic nitrogen under ocean acidification’Ocean acidification enhances primary productivity and nocturnal carbonate dissolution in intertidal rock pools (update)
Published 26 October 2023 Science ClosedTags: algae, biological response, BRcommunity, calcification, chemistry, dissolution, field, North Atlantic, primary production, respiration
Human CO2 emissions are modifying ocean carbonate chemistry, causing ocean acidification and likely already impacting marine ecosystems. In particular, there is concern that coastal, benthic calcifying organisms will be negatively affected by ocean acidification, a hypothesis largely supported by laboratory studies. The inter-relationships between carbonate chemistry and marine calcifying communities in situ are complex, and natural mesocosms such as tidal pools can provide useful community-level insights. In this study, we manipulated the carbonate chemistry of intertidal pools to investigate the influence of future ocean acidification on net community production (NCP) and calcification (NCC) at emersion. Adding CO2 at the start of the tidal emersion to simulate future acidification (+1500 µatm pCO2, target pH 7.5) modified net production and calcification rates in the pools. By day, pools were fertilized by the increased CO2 (+20 % increase in NCP, from 10 to 12 mmol O2 m−2 h−1), while there was no measurable impact on NCC. During the night, pools experienced net community dissolution (NCC < 0), even under present-day conditions, when waters were supersaturated with regard to aragonite. Adding CO2 to the pools increased nocturnal dissolution rates by 40 % (from −0.7 to −1.0 mmol CaCO3 m−2 h−1) with no consistent impact on nocturnal community respiration. Our results suggest that ocean acidification is likely to alter temperate intertidal community metabolism on sub-daily timescales, enhancing both diurnal community production and nocturnal calcium carbonate dissolution.
Continue reading ‘Ocean acidification enhances primary productivity and nocturnal carbonate dissolution in intertidal rock pools (update)’Assessing the impact of CO2 equilibrated ocean alkalinity enhancement on microbial metabolic rates in an oligotrophic system
Published 25 October 2023 Science ClosedTags: abundance, biological response, BRcommunity, chemistry, community composition, field, mesocosms, mitigation, North Pacific, otherprocess, photosynthesis, phytoplankton, primary production, prokaryotes, respiration
Ocean Alkalinity Enhancement (OAE) is a Negative Emissions Technology (NET) that shows significant potential for climate change mitigation. By increasing the bicarbonate ion concentration in ocean water, OAE could enhance long-term carbon storage and mitigate ocean acidification. However, the side effects and/or potential co-benefits of OAE on natural planktonic communities remain poorly understood. To address this knowledge gap, a mesocosm experiment was conducted in the oligotrophic waters of Gran Canaria. A CO2-equilibrated Total Alkalinity (TA) gradient was employed in increments of 300 µmol·L-1, ranging from ~2400 to ~4800 µmol·L-1. This study represents the first attempt to evaluate the potential impacts of OAE on planktonic communities under natural conditions. The results show that Net Community Production (NCP), Gross Production (GP), Community Respiration (CR) rates, as well as the metabolic balance (GP:CR), did not exhibit a linear response to the whole alkalinity gradient. Instead, significant polynomial and linear regression models were observed for all rates up to ∆TA1800 µmol·L-1, in relation to the Dissolved Inorganic Carbon (DIC) concentrations. Notably, the ∆TA1500 and 1800 µmol·L-1 treatments showed peaks in NCP shifting from a heterotrophic to an autotrophic state, with NCP values of 4 and 8 µmol O2 kg-1 d-1, respectively. These peaks and the optimum curve were also reflected in the nanophytoplankton abundance, size-fractionated chlorophyll a and 14C uptake data. Furthermore, abiotic precipitation occurred in the highest treatment after day 21 but no impact on the measured parameters was detected. Overall, a damaging effect of CO2-equilibrated OAE in the range applied here, on phytoplankton primary production, community metabolism and composition could not be inferred. In fact, a potential co-benefit to OAE was observed in the form of the positive curvilinear response to the DIC gradient up to the ∆TA1800 treatment. Further experimental research at this scale is key to gain a better understanding of the short and long-term effects of OAE on planktonic communities.
Continue reading ‘Assessing the impact of CO2 equilibrated ocean alkalinity enhancement on microbial metabolic rates in an oligotrophic system’Structurally stable but functionally disrupted marine microbial communities under a future climate change scenario: potential importance for nitrous oxide emissions
Published 24 October 2023 Science ClosedTags: biological response, BRcommunity, community composition, laboratory, molecular biology, mollusks, multiple factors, North Atlantic, otherprocess, primary production, prokaryotes, respiration, temperature
Highlights
- No effect of OW and OA on the composition and α diversity of microbial biofilms.
- OW promoting nitrous oxide emissions of microbial biofilms.
- OA decreasing nitrous oxide emissions of microbial biofilms.
- An overriding impact of OA over OW on microbial biofilm nitrous oxide emissions.

Abstract
The blue mussel Mytilus edulis is a widespread and abundant bivalve species along the North Sea with high economic and ecological importance as an engineer species. The shell of mussels is intensively colonized by microbial organisms that can produce significant quantities of nitrous oxide (N2O), a potent greenhouse gas. To characterize the impacts of climate change on the composition, structure and functioning of microbial biofilms on the shell surface of M. edulis, we experimentally exposed them to orthogonal combinations of increased seawater temperature (20 vs. 23 °C) and decreased pH (8.0 vs. 7.7) for six weeks. We used amplicon sequencing of the 16S rRNA gene to characterize the alpha and beta diversity of microbial communities on the mussel shell. The functioning of microbial biofilms was assessed by measuring aerobic respiration and nitrogen emission rates. We did not report any significant impacts of climate change treatments on the diversity of mussel microbiomes nor on the structure of these communities. Lowered pH and increased temperature had antagonistic effects on the functioning of microbial communities with decreased aerobic respiration and N2O emission rates of microbial biofilms in acidified seawater compared to increased rates in warmer conditions. An overriding impact of acidification over warming was finally observed on N2O emissions when the two factors were combined. Although acidification and warming in combination significantly reduced N2O biofilm emissions, the promotion of aquaculture activities in coastal waters where shellfish do not normally occur at high biomass and density could nonetheless result in unwanted emissions of this greenhouse gas in a near future.
Continue reading ‘Structurally stable but functionally disrupted marine microbial communities under a future climate change scenario: potential importance for nitrous oxide emissions’Role of culture solution pH in balancing CO2 input and light intensity for maximising microalgae growth rate
Published 4 October 2023 Science ClosedTags: algae, biological response, growth, laboratory, light, multiple factors, primary production, South Pacific
Highlights
- Microalgae growth is governed by CO2 input and light intensity.
- CO2 input & light intensity have an opposing impact on the culture pH.
- Microalgae growth can be inhibited by excessive lighting or CO2 input.
- Balancing CO2 input and light intensity is essential for CO2 fixation by microalgae.
- CO2 fixation rate of 4.2 g/L by Scenedesmus sp. at optimised condition.

Abstract
The interplay between CO2 input and light intensity is investigated to provide new insight to optimise microalgae growth rate in photobioreactors for environmental remediation, carbon capture, and biomass production. Little is known about the combined effect of carbon metabolism and light intensity on microalgae growth. In this study, carbonated water was transferred to the microalgae culture at different rates and under different light intensities for observing the carbon composition and growth rate. Results from this study reveal opposing effects from CO2 input and light intensity on the culture solution pH and ultimately microalgae growth rate. Excessive CO2 concentration can inhibit microalgae growth due to acidification caused by CO2 dissolution. While increasing light intensity can increase pH because the carboxylation process consumes photons and transfers hydrogen ions into the cell. This reaction is catalysed by the enzyme RuBisCO, which functions optimally within a specific pH range. By balancing CO2 input and light intensity, high microalgae growth rate and carbon capture could be achieved. Under the intermittent CO2 transfer mode, at the optimal condition of 850 mg/L CO2 input and 1089 μmol/m2/s light intensity, leading to the highest microalgae growth rate and carbon fixation of 4.2 g/L as observed in this study.
Continue reading ‘Role of culture solution pH in balancing CO2 input and light intensity for maximising microalgae growth rate’Decreased calcification to photosynthesis ratio in coccolithophores under reduced O2 and elevated CO2 environment
Published 2 October 2023 Science ClosedTags: biological response, calcification, growth, laboratory, multiple factors, oxygen, photosynthesis, phytoplankton, primary production
We examined the physiological performance in the most cosmopolitan coccolithophorid, Emiliania huxleyi, and Gephyrocapsa oceanica, which were treated with 8.3 (AO), 4.6 (MO) and 2.5 (LO) mg L–1 O2 under 400 (AC) and1000 (HC) ppm CO2 conditions. Elevated CO2 decreased the specific growth rate of cells cultured under AO and LO conditions in both species, but it increased the rate in the MO-grown E. huxleyi. Regardless of the CO2 levels, diminished O2 concentration inhibited the growth rate in E. huxleyi while accelerating the rate in G. oceanica. LO reduced the particulate organic carbon (POC) production rate compared to the AO treatment in both species. Additionally, the decrease was higher in the HC cultures than in the AC ones. LO also inhibited the production rate of particulate inorganic carbon (PIC) compared to the AO/AC treatment. Due to a higher reduction in the production rate of PIC than POC, the PIC/POC ratio was decreased in the LO treatment compared to the AO/AC treatment. The current study reveals that low O2 can, individually or in combination with high CO2, considerably affect the physiology of marine photoautotrophic organisms.
Continue reading ‘Decreased calcification to photosynthesis ratio in coccolithophores under reduced O2 and elevated CO2 environment’Seasonality of marine calcifiers in the northern Barents Sea: spatiotemporal distribution of planktonic foraminifers and shelled pteropods and their contribution to carbon dynamics
Published 22 September 2023 Science ClosedTags: abundance, Arctic, biological response, chemistry, field, mollusks, morphology, otherprocess, physiology, primary production, protists
Highlights
- In the northern Barents Sea there is a seasonal pattern of production and size distribution of planktonic foraminifers and pteropods, increasing from winter (March) to summer (July–August) and late autumn (December).
- In general, pteropods dominate over planktonic foraminifera in the Arctic influenced stations.
- In the study area, pteropods contribute the most (>80%) to carbon standing stocks and export production.
- The highest values of carbon standing stocks and export production were found in the seasonal ice zone during all seasons.
Abstract
The Barents Sea is presently undergoing rapid warming and the sea-ice edge and the productive zones are retreating northward at accelerating rates. Planktonic foraminifers and shelled pteropods are ubiquitous marine calcifiers that play an important role in the carbon budget and being particularly sensitive to ocean biogeochemical changes and ocean acidification. Their distribution at high latitudes have rarely been studied, and usually only for the summer season. Here we present results of their distribution patterns in the upper 300 m in the water column (individuals m−3), protein content and size distribution on a seasonal basis to estimate their inorganic and organic carbon standing stocks (µg m−3) and export production (mg m−2 d−1). The study area constitutes a latitudinal transect in the northern Barents Sea from 76˚ N to 82˚ N including seven stations through both Atlantic, Arctic, and Polar surface water regimes and the marginal and seasonal sea-ice zones. The transect was sampled in 2019 (August and December) and 2021 (March, May, and July). The highest carbon standing stocks and export production were found at the Polar seasonally sea-ice covered shelf stations with the contribution from shelled pteropods being significantly higher than planktonic foraminifers during all seasons. We recorded the highest production of foraminifers and pteropods in summer (August 2019 and July 2021) and autumn (December 2019) followed by spring (May 2021), and the lowest in winter (March 2021).
Continue reading ‘Seasonality of marine calcifiers in the northern Barents Sea: spatiotemporal distribution of planktonic foraminifers and shelled pteropods and their contribution to carbon dynamics’Ocean acidification affects the response of the coastal coccolithophore Pleurochrysis carterae to irradiance
Published 21 September 2023 Science ClosedTags: biological response, growth, laboratory, light, multiple factors, North Pacific, photosynthesis, physiology, phytoplankton, primary production
The ecologically important marine phytoplankton group coccolithophores have a global distribution. The impacts of ocean acidification on the cosmopolitan species Emiliania huxleyi have received much attention and have been intensively studied. However, the species-specific responses of coccolithophores and how these responses will be regulated by other environmental drivers are still largely unknown. To examine the interactive effects of irradiance and ocean acidification on the physiology of the coastal coccolithophore species Pleurochrysis carterae, we carried out a semi-continuous incubation experiment under a range of irradiances (50, 200, 500, 800 μmol photons m−2 s−1) at two CO2 concentration conditions of 400 and 800 ppm. The results suggest that the saturation irradiance for the growth rate was higher at an elevated CO2 concentration. Ocean acidification weakened the particulate organic carbon (POC) production of Pleurochrysis carterae and the inhibition rate was decreased with increasing irradiance, indicating that ocean acidification may affect the tolerating capacity of photosynthesis to higher irradiance. Our results further provide new insight into the species-specific responses of coccolithophores to the projected ocean acidification under different irradiance scenarios in the changing marine environment.
Continue reading ‘Ocean acidification affects the response of the coastal coccolithophore Pleurochrysis carterae to irradiance’

