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Multi-level holobiont dysregulation increases the ecological risk of combined ocean acidification and benzo[a]pyrene pollution to the reef-building coral Porites lutea

Published 17 March 2026 Science Closed
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Highlights

  • Combined ocean acidification and BaP induce holobiont dysregulation, evidencing by a decoupled Symbiodiniaceae proliferation and a collapse of the archaeal Nanoarchaeota-Halobacterota symbiosis.
  • The coral host shifts its defense strategy from antioxidant capacity to cellular homeostasis, while the bacterial community increases functional redundancy, revealing a costly acclimation mechanism.
  • The multi-level dysregulation demonstrates an underestimated ecological risk, highlighting that current single-stressor risk assessments are inadequate for protecting corals under complex pollution scenarios.

Abstract

Reef-building corals are increasingly threatened by the combined effects of global climate change and localized organic pollutants. However, the holistic impacts of co-exposure to ocean acidification (OA) and benzo[a]pyrene (BaP) on coral holobionts remain poorly understood. Here, we investigated the multi-level responses of the reef-building coral Porites lutea to short-term (7-day) exposure to OA (pH 7.80), BaP (10 µg/L), and their combination, by integrating physiological measurements with microbiome profiling (ITS2 and 16S rRNA). We found that combined stress was associated with a dysregulated response in Symbiodiniaceae, characterized by a significant increase in cell density without a parallel rise in chlorophyll content, suggesting a possible compensatory but inefficient proliferation response. Despite this, the dominant symbiont Cladocopium C15 remained stable. The bacterial diversity increased (e.g., enrichment of Ruegeria and Acanthopleuribacter, decline of Endozoicomonas), which may suggest enhanced functional redundancy, while the archaeal community was significantly restructured, most notably a marked decline of the putative obligate Nanoarchaeota–Halobacterota symbiosis. At the host level, combined stress was associated with suppressed antioxidant enzyme activities (SOD/POD) but upregulated genes related to protein folding (Hsp90) and calcium homeostasis (NCX1, VAMP4). These findings suggest a complex holobiont reconfiguration under combined stress, involving a stabilized core symbiont, altered microbiomes, and a shifted host defense strategy. Our study suggests that the ecological risk of combined OA and organic pollution may not be extrapolated from single-stressor responses, indicating the need to incorporate multi-stressor frameworks into coral reef risk assessments.

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Marine heatwaves, ocean warming and acidification reshape reef fish gut microbiomes

Published 16 March 2026 Science Closed
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Extreme climatic events and gradual climate change are increasingly anticipated to interact and reshape ecological communities. However, the combined effects of ocean warming, acidification and marine heatwaves on host‐associated microbial communities and their potential role in host adaptation remain poorly understood. Here, we assessed shifts in gut microbiome communities and their associations with physiological performance in one tropical ( Abudefduf vaigiensis ) and one subtropical ( Microcanthus strigatus ) reef fish species, across three temperate reefs representing natural analogues of climate change: a present‐day baseline (‘cool reef’), a chronically warmed reef (‘warm reef’) and a reef experiencing combined warming and extreme acidification (‘extreme reef’). We also examined gut microbiome changes in A. vaigiensis before and during a severe marine heatwave. A. vaigiensis had lower gut microbiome evenness and diversity at the warm (43% and 44% decrease, respectively) and extreme (38% and 31% decrease) reefs compared to the cool reef, and its gut microbiome community shifted at the extreme reef with a 122% increase in abundance of opportunistic bacteria Vibrio. A. vaigiensis also had lower gut microbiome richness at the warm (42% decrease) and extreme (52% decrease) reefs during the heatwave compared to pre‐heatwave individuals. In contrast, M. strigatus showed higher microbiome evenness (99% increase) and diversity (98% increase) at the warm reef compared to the cool reef; however, these gains were lost at the extreme reef, with microbiome diversity and evenness returning to cool reef levels. Microbiome changes in both species were generally not associated with their physiological performance (protein content, oxidative stress, antioxidant capacity or body condition). Our findings suggest that marine heatwaves, ocean warming and acidification can reshape reef fish gut microbiomes, driving simplification in Abudefduf vaigiensis but distinct restructuring in Microcanthus strigatus . We conclude that climate‐driven microbiome reshuffling may alter host–microbiome relationships and functions in fishes in a future ocean.

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Stony coral symbioses show variable responses to future ocean conditions

Published 16 March 2026 Science Closed
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Coral reefs support over a quarter of marine species and nearly a billion people worldwide but are also among the ecosystems most threatened by anthropogenic impacts. There is long-standing debate about whether coral symbioses will be disrupted or respond adaptively under future ocean conditions. Using a factorial 2.5-year future-ocean mesocosm experiment across eight coral species representing the major coral lineages, we tracked symbiont community shifts within replicate fragments from the same individual coral. Some corals exhibited stochastic divergence consistent with dysbiosis, whereas others showed deterministic, thermally adaptive shifts. Heat stress generally reduced symbiont diversity and promoted predictable restructuring, supporting deterministic processes under moderate stress but stochastic dysbiosis under extreme conditions. We propose that adaptive and stochastic responses represent endpoints along a continuum of host-orchestrated symbiont sorting. This study bridges coral reef ecology with broader host–microbiome theory, offering an integrated perspective on how symbiotic systems may respond to environmental change.

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Environmental controls and nonlinear responses of the diatom-dinoflagellate ratio in Jiaozhou Bay

Published 13 March 2026 Science Closed
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Highlights

  • Dia/dino abundance, biomass, and diversity ratios exhibited similar temporal patterns;
  • All ratios showed considerable heterogeneity without a consistent distributional trend;
  • Dia/dino ratios responded distinctly to DO, nutrients, and their interactions;
  • Shifting seawater properties exerted large influence on diatom-dinoflagellate dynamics.

Abstract

Diatoms and dinoflagellates are widely recognized as key indicators of marine ecosystem status and play central roles in ecosystem functioning and biogeochemical cycling. Yet how these two major phytoplankton groups adjust to changing coastal environments, and whether such adjustments occur coherently in different ecological dimensions, remains poorly constrained. Hence, we studied the temporal and spatial dynamics of diatom-dinoflagellate (dia/dino) ratios in Jiaozhou Bay during 2021 and 2024, integrating abundance-, carbon biomass-, diversity-, and richness-based metrics. Although abundance, biomass, and diversity ratios exhibited broadly similar temporal trajectories, the richness ratio displayed an opposite pattern, highlighting a decoupling between numerical dominance and species composition. Spatially, all four ratios exhibited significant heterogeneity, without a consistent nearshore-offshore gradient, reflecting complex local regulation. Correlation analyses revealed distinct controls on dia/dino ratios. The abundance ratio increased under conditions of elevated dissolved inorganic nitrogen (DIN) and reduced dissolved oxygen (DO), whereas the diversity ratio was associated with high DIN and low dissolved inorganic phosphorus (DIP). In contrast, the carbon biomass ratio was primarily linked to reduced DO and lower pH, while the richness ratio responded most strongly to the combined influence of low DO and elevated DIP. These contrasting responses indicated that dia/dino ratios captured different facets of phytoplankton community reorganization rather than reflecting a single environmental driver. Overall, our results suggested that the balance between diatoms and dinoflagellates in Jiaozhou Bay emerged from the coupled and nonlinear interactions among nutrient availability and oxygen dynamics. This study highlighted the dia/dino balance as an integrative indicator of coastal ecosystem condition and implied the importance of considering multiple ecological dimensions when assessing phytoplankton responses to ongoing eutrophication and environmental change.

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Eco-evolutionary dynamics of planktonic calcifying communities under ocean acidification

Published 12 March 2026 Science Closed
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Increasing emissions of CO2 into the atmosphere are causing ocean acidification, threatening calcifying organisms. In this study, we model the physiological responses of coccolithophorids to acidification to understand the ecological and evolutionary outcomes of a system in interaction with zooplankton. Assuming a trade-off between growth and protection against grazing, we show that calcification has bivalent effects on transfers between two trophic levels and that acidity can strongly alter energy transfers. Taking into account the evolution of calcifying phenotypes in response to acidification, we show that the system outcome contrasts with previous results. While the effect of evolution depends on how calcification affects grazing, it nevertheless follows that acidification leads to a decrease in calcifying capacity. This evolutionary decrease may be progressive, but can also lead to tipping points where abrupt shifts may occur. Such a counter-selection of calcification in turn affects ecosystem functioning, enhancing energy transfers within the system and modifying carbon fluxes. We discuss how such eco-evolutionary changes may impact food webs integrity, carbon sequestration into the deep ocean and therefore endanger the carbon pump stability.

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Persistence of coral reef structures into the twenty-first century

Published 2 March 2026 Science Closed
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Coral reefs provide important socioecological services but are vulnerable to climate change, which shifts the balance between the production and erosion of calcium carbonate (CaCO3). In this Review, we summarize understanding of reef accretion, describe the mechanisms of carbonate production and erosion, and consider the effects of future ocean warming and acidification on key reef-building and eroding taxa. The combined stressors of climate change substantially reduce net carbonate production, with a more pronounced effect on calcifying algae than corals. However, declining coral cover driven by marine heatwaves and mass bleaching will probably be the dominant determinant of future reef carbonate budgets, and thus only reefs with thermally adapted populations are predicted to maintain the ability to sustain positive CaCO3 production under climate change, even if calcareous algal cover increases. As carbonate budgets become net negative in the future, the longevity of pre-existing reef frameworks remains unknown and understudied owing to the timescales required to meaningfully assess framework removal rates. Improving estimates of the rates of biologically driven framework loss and chemical dissolution will also be important in better predicting future reef persistence. Key knowledge gaps exist in understanding the effects of deoxygenation on coral reefs, as well as the influence of climate change on understudied sediment-producing taxa such as foraminifera and tropical molluscs.

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Ocean acidification reduces diatom and photosynthetic gene abundance on plastic in an coastal bay mesocosm experiment

Published 25 February 2026 Science Closed
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Discarded plastics are accumulating in the global ocean and posing threat to marine life. The plastisphere – the community colonizing plastic surfaces – profoundly influences plastic’s environmental behavior, affecting its degradation and entry into marine food webs. Ocean acidification (OA) resulted from anthropogenic CO2 emissions, is also threatening marine ecosystems, but the effect of OA on the structure and ecological function of the plastisphere community remains poorly understood. Here, using a mesocosm experiment, we investigated the effects of OA on the plastisphere colonizing floating PET plastic bottles. The study was conducted using subtropical eutrophic coastal water from Southern China under two CO2 conditions: increased CO2 to 1000 μatm (HC) and ambient CO2 410 μatm (LC). Metagenomic sequencing of the plastic samples, after exposure for 32 days, showed striking changes in relative abundance of eukaryotes and bacteria caused by HC. There was a 75.3 % decrease in eukaryote read abundances at high CO2, most strikingly a 95.6% decrease in the relative abundance of diatoms. In addition, the relative abundance of genes involved in photosystem II light reactions and pigment synthesis decreased under high CO2 conditions. This suggests that OA could reduce the photosynthetic potential within the plastisphere. Shifts in plastisphere community structure and potentially diminished photosynthesis under OA could influence the food chains within plastisphere, plastic degradation, transportation, and carbon cycle involving plastics. Overall, our results suggest that OA can alter the functional ecology of the plastisphere, with potential implications for marine biogeochemical processes and food web dynamics in subtropical eutrophic coastal water.

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Ocean acidification modifies site fidelity and patterns of seagrass habitat use by a herbivorous fish

Published 25 February 2026 Science Closed
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Ocean acidification (OA), characterized by changes in seawater chemistry and a concomitant decline of pH due to the uptake by seawater of the atmospheric CO2, will profoundly shape marine ecosystems. The lower pH/higher pCO2 can act negatively (as a stressor for organisms with a calcareous exoskeleton) or positively (as a direct resource for primary producers like macrophytes). Consequently, herbivores may indirectly benefit from OA counteracting the direct negative effects of living under high pCO2/low pH conditions. Here, we investigated how OA may influence site fidelity, habitat use, and trophic behaviour patterns of Sarpa salpa, the main herbivorous fish associated with Posidonia oceanica meadows in the north-western Mediterranean Sea. We assessed if and how OA influences the habitat use of S. salpa by comparing natural tags, in otoliths and muscle tissues, between CO2 vents and reference pH sites. We did not find differences in otolith elemental composition and shape among fish exposed to different pH conditions (CO2 vent vs ambient pH sites). However, otolith isotopic signatures differed between life stages (young vs sub-adults), consistent with the variations observed in seawater-dissolved inorganic carbon across sites. Finally, comparisons of the nutritional value marine vegetation (macroalgae, P. oceanica, epiphytes) showed that P. oceanica and epiphytes were more nutritious at CO2 vents, along with increased consumption by S. salpa. This trophic separation indicates that S. salpa spent more time exploiting the trophic resources in the CO2 vents. Together, our findings shed new light on plant–herbivore interactions within P. oceanica meadows under future OA scenarios.

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Indo-Pacific coral reef sponge diversity declines under predicted future ocean conditions

Published 19 February 2026 Science Closed
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Future oceans are predicted to favor groups like sponges over calcifying taxa such as scleractinian corals. Here, we test this hypothesis by examining the development of coral reef communities in experimental mesocosms over 23 months. 85 sponge species among the calcifying class Calcarea (~33%), and non-calcifying Demospongiae (~60%) and Homoscleromorpha (<10%) recruited to warming (+2°C), acidification (-0.2 pH), and warming+acidification (+2°C, -0.2 pH) future ocean treatments. The diversity of calcifying sponges was unimpacted across any treatment, whereas non-calcifying classes showed greatest declines. 57-66% of demosponges decreased under future ocean conditions, and homoscleromorphs were entirely absent from acidified treatments. Through the sponge loop, sponges play a fundamental role in coral reef nutrient cycling, and altered coral reef community composition likely has functional consequences. This study challenges the assumption that non-calcifying species are less impacted and highlights the importance of understanding how community composition may alter ecosystem functioning under future ocean conditions.

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Seaweeds (Ulva, Gracilaria) significantly increase the growth rates of North Atlantic oysters, scallops, and clams grown in an aquaculture setting

Published 17 February 2026 Science Closed
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Highlights

  • Seaweeds significantly increased the growth rates of oysters by 20–70%, of clams by 60–70%, and of scallops by 130–140%.
  • Seaweeds caused significant increases in pH, DO, and the saturation state of calcium carbonate (Ω).
  • Seaweeds caused a significant increase in the concentrations of suspended chlorophyll a.
  • Co-culture of seaweeds with bivalves accelerates the growth rate of bivalves by increasing pH, DO, Ω, and food availability.

Abstract

While bivalve populations are threatened by climate change stressors including ocean acidification and hypoxia, the photosynthetic activity of seaweeds can raise the pH and dissolved oxygen (DO) of seawater, combatting these stressors. Here, three commercially important North Atlantic bivalves (Eastern oysters, Crassostrea virginica; hard clams, Mercenaria mercenaria; bay scallops, Argopecten irradians) were grown in the presence and absence of two common seaweeds (Ulva sp. and Gracilaria sp.) in replicated 300 L outdoor aquaculture tables with flow-through seawater. Environmental conditions including pH, DO, and chlorophyll a were continuously monitored and levels of dissolved inorganic carbon and the complete carbonate chemistry of seawater were quantified. The presence of seaweeds significantly increased shell- and tissue-based growth rates of oysters by 20–70%, of clams by 60–70%, and of scallops by 130–140% (p < 0.05) with both seaweeds being similarly effective. Both seaweed species caused significant increases in pH, DO, and the saturation state of calcium carbonate (Ω) during the day (p < 0.05) whereas differences at night were muted with night-time Ωaragonite levels being at or below saturation in all treatments. In some experiments, the presence of seaweeds caused a significant increase in the concentrations of suspended chlorophyll a, suggesting that seaweeds increased the total amount and diversity of food available to bivalves. Collectively, this study demonstrates that the co-culture of seaweeds with bivalves in a land-based aquaculture setting can significantly accelerate the growth rate of bivalves by increasing pH, DO, Ω, and food availability.

Continue reading ‘Seaweeds (Ulva, Gracilaria) significantly increase the growth rates of North Atlantic oysters, scallops, and clams grown in an aquaculture setting’

Carbon concentration mechanisms in Canary Islands macroalgae and their implications for future benthic community structure under ocean acidification

Published 12 February 2026 Science Closed
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In recent decades, due to the anthropogenic CO2 concentration increase in the atmosphere, the chemistry of seawater has been seriously altered, producing the phenomenon known as Ocean Acidification (OA). Of all the dissolved inorganic carbon (DIC) present in seawater, only 1% is in the form of CO2. However, if anthropogenic CO2 emissions to the atmosphere continue, it will no longer be a limiting resource. Part of the response of marine photosynthetic organisms to these changes depends on their carbon physiology. The presence and effectiveness of carbon concentration mechanisms (CCM) can define the production and growth of macroalgae under OA conditions. Although CCMs are not essential when the seawater concentration of inorganic carbon is high, species that do not use them can see their performance improved. Our goal was to determine the presence or absence of CCMs in a total of 19 species of common macroalgae in the Canary Islands through a pH drift experiment and to establish their primary production rates through incubations and measurements of the O2 variation. Samples of each species were incubated during 8, 24 and 32 h in isolated containers and under controlled lighting and temperature conditions. Of the 19 species studied, 11 presented CCM and 8 did not present CCM. Five of the eight species that did not show the presence of CCMs in the present study are present in the CO2 seeps of Fuencaliente and one of them, H. scoparia is a dominant species.

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Summary of ocean acidification data collected by the National Coral Reef Monitoring Program in the U.S. Pacific Islands, 2021—2023

Published 10 February 2026 Newsletters and reports Closed
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Coral reefs are among the most biologically diverse and economically valuable ecosystems on earth. They provide billions of dollars annually in food, jobs, recreation, coastal protection, and other critical ecosystem services (Brander & van Beukering, 2013; Costanza et al., 2014). However, these ecosystems are also among the most vulnerable to ocean acidification (OA). Even under the most optimistic model projections, increasing atmospheric and seawater carbon dioxide concentrations are likely to occur over the next few decades, decreasing seawater pH and reducing the availability of the carbonate ion (CO32-) building blocks that corals and other marine calcifiers use to construct reef habitat (Chan & Connolly, 2013; Jiang et al., 2023). OA threatens the persistence of coral reefs by reducing rates of coral and crustose coralline algae (CCA) calcification and accelerating rates of bioerosion, thereby lowering net production of calcium carbonate (CaCO3) and compromising the structural complexity and integrity of three-dimensional reef habitat (Cornwall et al., 2021; Hill & Hoogenboom, 2022). As a result, many of the ecological, economic, and cultural values offered by coral reefs could be significantly impacted by OA over the next century.

NOAA’s National Coral Reef Monitoring Program (NCRMP) provides a framework for long-term, national-level monitoring of the U.S.-affiliated coral reef areas. Funded jointly by the NOAA Coral Reef Conservation Program and Ocean Acidification Program, NCRMP assesses the status and trends of U.S. coral reef ecosystems and supports the management of the nation’s reefs (NOAA Coral Program, 2021). NCRMP’s long-term monitoring of OA and related coral reef ecosystem responses (NCRMP-OA) evaluates patterns and trends in carbonate chemistry and key ecosystem indicators across gradients of biogeography, oceanographic conditions, habitat types, and human impacts. These data sets are used to inform the efficacy of place-based coral reef management in close collaboration with federal, state, and jurisdictional partners.

To assess the progression of OA and impacts on coral reef ecosystems in the U.S. Pacific Islands, NCRMP-OA monitoring includes the following objectives:

  • Conduct carbonate chemistry sampling to monitor spatial variability and temporal change in pH, aragonite saturation state (Ωar), and other carbon system parameters;
  • Conduct diel carbonate chemistry water sampling and oceanographic instrument deployments at select sites;
  • Conduct census-based carbonate budget assessments to estimate rates of coral reef biological carbonate production and erosion.

This report summarizes the monitoring effort and results from 2021–2023 NCRMP-OA sampling and surveys. Additional NCRMP environmental, benthic, and fish data are not included in this report, but they can be accessed at the links provided in the Data Availability section.

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Assessing sponge resilience to ocean acidification in natural reef environments

Published 28 January 2026 Science Closed
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Highlights

  • Sponges are key components of coral reefs globally providing a range of important functional roles.
  • We used in situ incubation chambers to measure chlorophyll concentrations, oxygen fluxes and microbial communities for two common Indo-Pacific sponge species (Melophlus sarasinorum and Neopetrosia chaliniformis) at a natural CO2 vent (pHT 7.6–7.7) and control site in Papua New Guinea.
  • We found little evidence for any physiological differences between vent and control sponges, and no differences in the overall microbial communities
  • Overall, our results support the emerging evidence that heterotrophic sponges will likely be resilient to future ocean acidification.

Abstract

Sponges are key components of coral reefs globally providing a range of important functional roles. While sponges are under threat from the impacts of global climate change, there is an emerging picture of sponge tolerance to ocean acidification (OA). However, to date all physiological studies on sponge tolerance to OA have been under ex-situ experimental conditions and only for a limited number of sponge species. Instead, here we used in situ incubation chambers to measure chlorophyll concentrations and oxygen fluxes for two common Indo-Pacific sponge species (Melophlus sarasinorum and Neopetrosia chaliniformis) at a natural CO2 vent (pHT 7.6–7.7) and control site in Papua New Guinea. We also explored differences between the sponge microbial community composition between control and vent locations for N. chaliniformis. We found very low concentrations of chlorophyll in both species, compared to other sponges, suggesting these species are largely heterotrophic. We also found little evidence for any physiological differences between vent and control sponges, and no differences in the overall microbial communities, except some specific microbes. Overall, our results support the emerging evidence that heterotrophic sponges will likely be resilient to future ocean acidification.

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Core transcriptional plasticity pave the way for fish to succeed in a high-CO2 world

Published 26 January 2026 Science Closed
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Ocean acidification (OA) can alter the physiological and behavioural traits of marine fishes, raising concerns about how wild species will adapt to rising pCO2. Using natural volcanic CO2 vents at White Island, New Zealand, as analogues for future OA conditions, we quantified behaviours in situ and sequenced the brain transcriptomes of four highly site-attached fish species from two vents and a nearby control site with ambient pCO2, of which two species exhibit increased population densities at the vent. We found that two species showed changes in habitat preferences, and all four species with significant changes in gene expression related to circadian rhythm, visual perception, and energy metabolism at the vents. Strikingly, three differentially expressed genes, a heat shock protein (HS90A) and two immediate early genes (IEGs: JUN and FOS), were central regulators for transcriptional changes across all species at the vents. Within the circadian entrainment pathway, expression changes in opsins may act as a trigger, while core clock genes and IEGs function as downstream effectors, suggesting that elevated pCO2 may reset the circadian clock in these fishes. Notably, the two species with increased populations at the vents exhibited distinct transcriptional responses in genes involved in calcium signalling, reproduction, intracellular pH regulation and energy metabolism. Together with convergent evolution in a calcium signalling gene and an HS90 facilitator, these molecular features may confer their reproduction advantages and ability to cope with elevated pCO2. Our study provides novel insights into the molecular mechanisms underlying fish responses to OA and highlights key pathways that may support survival and ecological success under a naturally high-CO2 world.

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The role of heterotrophy in the response of Oculina arbuscula to ocean acidification

Published 31 December 2025 Science Closed
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On both tropical and temperate reefs, the calcium carbonate skeletons produced by scleractinian corals provide habitat that supports a high biodiversity of fishes and invertebrates. Ocean acidification (OA), driven by excess anthropogenic CO2 uptake, causes declines in seawater pH and carbonate ion concentration and can compromise coral calcification by causing increased energetic demands. Deciphering how corals meet this increased energetic demand is critical to predicting their future persistence. Oculina arbuscula is a facultatively symbiotic temperate coral common on subtropical reefs of the South Atlantic Bight. This coral has demonstrated calcification resilience to reduced pH conditions in both symbiotic and aposymbiotic forms, despite aposymbiotic colonies lacking access to photosynthetically-derived energy. I hypothesized that energy acquired through heterotrophy is a mechanism by which O. arbuscula obtains the resources necessary to overcome the heightened energy demand created by ocean acidification. To investigate the role of heterotrophy, a 90-day laboratory experiment was conducted exposing aposymbiotic O. arbuscula fragments to a pH of either 7.7 or 8.0 under three different feeding levels of Artemia spp. nauplii. Although fragments with greater food consumption showed significantly higher calcification rates, this effect was independent of pH. Similarly, biochemical analyses indicated that total protein and total carbohydrate stores increased with higher food consumption but were unaffected by pH exposure. In contrast, total lipid stores decreased during the experiment, regardless of pH exposure or food level, suggesting the heterotrophic contribution to lipid stores was deficient. Together, these results indicate that while heterotrophically-derived energy may not be a primary mechanism underlying the ability of O. arbuscula to sustain calcification rates under OA stress, this coral species should continue to thrive in an increasingly acidifying ocean as long as heterotrophic food resources are in abundance.

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Aquaculture of seaweeds (Saccharina latissima, Ulva spp., Gracilaria spp.) significantly improves the growth of co-cultivated bivalves in mesotrophic, but not eutrophic, estuaries

Published 29 December 2025 Science Closed
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The co-cultivation of seaweeds with bivalve shellfish is a potential strategy for protecting bivalve crops against anthropogenic coastal acidification and hypoxia. We co-cultivated seaweeds and bivalves using a succession of seaweed species according to season (winter, Saccharina latissima → spring, Ulva spp. → summer, Gracilaria spp.) together with eastern oysters (Crassostrea virginica) and blue mussels (Mytilus edulis). Bivalves and seaweeds were deployed in two estuaries that contrasted in trophic state, one mesotrophic and one eutrophic. In all five experiments in the mesotrophic system, cocultivation with seaweeds significantly increased weight- and/or shell-based growth of bivalves (p < 0.05). Growth rate increases for C. virginica were modest, with weight-based growth improving by 17–21% and shell-based growth improving by 3–27% with seaweed co-culture of all macroalgal species. For M. edulis, the effect was large; co-culture with S. latissima caused 47% and 114% increases in shell- and weight-based growth rates, respectively. In the four experiments in the eutrophic estuary, co-culture with seaweeds did not significantly improve bivalve growth. Seaweed cultivation significantly improved water quality metrics (increased pH and dissolved oxygen (DO); p < 0.05 in all cases) in and around the seaweed sites at both locations, although increases in pH and DO were modest, and even in control treatments, there were no prolonged periods of harmful pH or DO levels. An abundance of macroalgal detritus may have bolstered the diets of co-cultivated bivalves in the mesotrophic estuary, a hypothesis supported by lower chlorophyll a concentration, and therefore lower planktonic food levels, at that site. Given that seaweeds display species-specific allelopathic effects against phytoplankton, it is also possible that the presence of seaweeds altered the phytoplankton community to the benefit of the bivalves. Regardless, the findings here demonstrate that co-cultivation with seaweeds can accelerate the growth of bivalves.

Continue reading ‘Aquaculture of seaweeds (Saccharina latissima, Ulva spp., Gracilaria spp.) significantly improves the growth of co-cultivated bivalves in mesotrophic, but not eutrophic, estuaries’

Compound hypoxia with heat or acidification stress induces synergistic and additive effects on coral physiology

Published 26 December 2025 Science Closed
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As climate change accelerates, coastal marine ecosystems are increasingly exposed to co-occurring stressors whose combined effects are nonlinear and difficult to predict. Deoxygenation is a rapidly intensifying yet underrecognized threat to coral reefs that interacts with heat and acidification to alter coral physiology and stress resilience. However, the effects of hypoxia-related compound events on corals are largely unknown, underscoring the need for multi-stressor studies. Here, we conducted two extended-exposure experiments (12–17 days) across the coral species Porites furcata, Porites astreoides and Siderastrea siderea, to disentangle the individual and combined effects of low dissolved oxygen (hypoxia) with either heat or acidification. We measured eight phenotypic traits related to growth, metabolism, and symbiosis health to test whether hypoxia imposes energetic constraints or other physiological stress that amplify the effects of heat or acidification. Standardized effect size analysis across 24 stressor–trait combinations revealed 13 additive, 10 synergistic, and only one antagonistic response. Hypoxia consistently suppressed dark respiration by 37–49% across species and altered photophysiology in the two Porites species, whereas acidification alone had minimal effects, particularly in S. siderea. Heat stress caused the most pronounced declines across nearly all traits, and when combined with hypoxia, it produced the highest number of synergistic interactions. In contrast, the combination of hypoxia and acidification largely resulted in additive responses, suggesting that independent physiological mechanisms underlie these effects. All corals showed strong metabolic depression under hypoxia which is likely beneficial as a short-term adaptive response but may impose energetic constraints in the long-term. These findings highlight deoxygenation as critical yet often overlooked drivers of coral reef vulnerability. More multi-stressor experiments across a range of species are urgently needed to improve predictions of reef resilience under future ocean conditions, where compound stress events are expected to become more frequent and severe.

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Syntheses on taxonomic and functional biodiversity related to ocean acidification in a well-studied CO2 vents system: the Castello Aragonese of Ischia (Italy)

Published 22 December 2025 Science Closed
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Ocean acidification (OA) is considered a relevant additional threat to marine biodiversity and is linked to the increasing CO2 concentration in the atmosphere. Here, we provide a synthesis on the loss of both taxonomic and functional biodiversity, in the up to date best studied CO2 vents in the world, the Castello Aragonese of Ischia (Tyrrhenian Sea, Italy), analyzing a large data set available at this site and reporting qualitative taxonomic data along a gradient of OA from ambient normal conditions outside the vents (pH 8.1) to low pH conditions (pH 7.8–7.9) and extreme low pH conditions (pH < 7.4). A total of 618 taxa were recorded (micro- and macrophytes, benthic invertebrates, and fishes). A relevant loss of biodiversity (46% of the species) was documented from control/normal pH conditions to low pH, and up to 56% species loss from control of extreme low pH conditions. Functional groups analysis on the fauna (calcification, size, motility, feeding habit, and reproduction/development) allowed us to draw an identikit of the species which is able to better thrive under OA conditions. These are motile forms, small- or medium-sized, generalist feeders, at the low level of the food web (herbivores or detritivores), mainly brooders, or with indirect benthic development, and without calcification or weakly calcified.

Continue reading ‘Syntheses on taxonomic and functional biodiversity related to ocean acidification in a well-studied CO2 vents system: the Castello Aragonese of Ischia (Italy)’

Genotype and symbiont composition rather than environment influence susceptibility to stony coral tissue loss disease in coral restoration broodstock

Published 19 December 2025 Science Closed
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Over the last several decades, Florida’s Coral Reef has been impacted by global and local stressors causing significant declines in living coral with no signs of natural recovery. Ocean warming, ocean acidification, and infectious diseases are major contributors to the precipitous loss of corals within this region. Since 2014, the stony coral tissue loss disease (SCTLD) outbreak has been particularly devastating, causing unprecedented mortality in over 20 massive coral species. As SCTLD is now endemic in the region, and threats from climate change are likely to persist, studying the disease susceptibility of different coral genotypes under future environmental scenarios is vital for effective restoration. Here, we exposed Orbicella faveolata and Pseudodiploria clivosa genotypes to wild colonies showing signs consistent with SCTLD immediately following a 2-month long exposure to ocean warming (OW) and ocean acidification (OA) scenarios. Corals were exposed to SCTLD for 3 weeks while maintaining the environmental treatments. For both species, pre-exposure to OW and OA scenarios did not make corals more susceptible to SCTLD. However, three genotypes hosting higher levels of Breviolum were at increased risk for showing SCTLD signs under these conditions. One O. faveolata genotype was consistently resistant to SCTLD under the different scenarios, suggesting that natural levels of resistance exist in coral restoration broodstock. Understanding why this genotype could withstand exposure to these stressors may be critical for ensuring survival of restored populations into the future.

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Asymmetric effects of acidification and warming on foundation species and their predators in the California rocky intertidal zone

Published 11 December 2025 Science Closed
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The effects of climate change on marine organisms act through multiple pathways, as ocean warming and acidification can affect both their physiology and interspecies interactions. Asymmetries in species-specific physiological responses to climate change may alter the strength of interactions, such as those between predator and prey, which will have cascading effects on ecosystem structure. How foundation species and their interactions are affected by climate change will profoundly affect their community due to their dominance. I assessed the physiological responses of two common California rocky intertidal consumer–resource pairs across multiple trophic levels. I measured metabolic rates after four weeks of exposure to a range of nine pH levels (7.2–8.0) at two temperature levels (ambient, +4°C). At the lowest trophic level, I examined the effects of climate change on a primary producer foundation species, Silvetia compressa (golden rockweed), and its herbivore, Tegula eiseni, under differing upwelling regimes in early and late spring. Rockweed responded more to acidification than warming, decreasing photosynthetic rates in early spring and increasing rates during late spring. Their snail consumer, however, responded most strongly to temperature—increasing both respiration rates and calcification under warm conditions in late spring. In addition to species specific responses to climate stressors, the rockweed–snail pair had context-dependent responses based on background environmental conditions. Greater upwelling during late spring, combined with a younger snail population could explain differences in responses between early and late spring. Next, I examined asymmetries between a calcifying foundation species, Mytilus californianus, and its whelk predator, Nucella emarginata. Specifically, mussels were generally resistant to acute exposure to ocean warming and acidification, while whelks were highly sensitive to temperature. Whelks decreased their calcification, respiration, shell extension, and probability of drilling a mussel under warmer conditions. Across both experiments, I observed asymmetries in response to changes in pH and temperature between consumer and resource, which can shift ecosystems between bottom-up and top-down processes. Overall, I showed that mesopredators, such as herbivorous and carnivorous snails, appeared to be the most sensitive to changes in temperature relative to their foundation species prey. Climate change may reshape rocky intertidal communities by altering predation patterns on foundation species, which could either facilitate or threaten the survival of other associated species in a changing environment.

Continue reading ‘Asymmetric effects of acidification and warming on foundation species and their predators in the California rocky intertidal zone’

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