Ocean acidification threatens coral reef ecosystems by challenging calcification processes fundamental to reef accretion. Yet many corals continue to calcify under elevated pCO2, suggesting species-specific physiological plasticity and potential cellular compensations. Here, we use label-free quantitative proteomics to investigate proteomic responses of two common pocilloporid corals, Stylophora pistillata and Pocillopora damicornis, with known differential resistance to ocean acidification after two months at moderate (~ 940 ppm) and high (~ 2,800 ppm) pCO2 compared to the control (~ 480 ppm). S. pistillata exhibited extensive proteomic restructuring under high pCO2, marked by widespread declines of energy-generating pathways, yet selective increase of proteins involved in ion transport, cytoskeletal stability, and stress responses. This indicates a strategy of general metabolic suppression coupled with targeted investment into essential cellular functions, potentially sustaining calcification despite reduced overall metabolic capacity. In contrast, P. damicornis showed much less proteomic adjustment, primarily involving structural proteins and those potentially linked to cellular redox balance, signifying a moderate, targeted strategy for physiological stability. These divergent responses highlight contrasting modes of resistance (plasticity versus stability). Integrated with physiological data, our findings clarify cellular mechanisms controlling calcification, demonstrating the value of proteomics in coral ecophysiology and providing new insights into species-specific vulnerability under future ocean conditions.
Continue reading ‘Differing proteome responses to ocean acidification between two common pocilloporid corals’Posts Tagged 'adaptation'
Differing proteome responses to ocean acidification between two common pocilloporid corals
Published 24 December 2025 Science ClosedTags: adaptation, biological response, corals, laboratory, otherprocess, physiology, South Pacific
Impact of acidification and ultraviolet radiation on the physiology of Ulva fasciata
Published 19 December 2025 Science ClosedTags: adaptation, algae, biological response, laboratory, light, Mediterranean, multiple factors, otherprocess, photosynthesis, physiology
Ocean acidification and increased UVR exposure driven by factors such as global warming, ozone layer depletion and anthropogenic activities are impacting the physiology and ecology of macroalgae in species-specific, diverse and complex ways. This study aims to investigate the individual and combined effects of ocean acidification and ultraviolet radiation (UVR) on the physiological responses of the cosmopolitan macroalgae species Ulva fasciata. The algae samples were cultured under laboratory conditions at two different pH levels (8.2 and 7.7) and under either the presence or absence of UVR. In U. fasciata, the maximum quantum efficiency of photosystem II (Fv/Fm) decreased with low pH and UVR, and a synergistic stress response was observed when these two stressors were applied together. The relative electron transport rate (rETRmax) varied depending on pH, while UVR increased this rate. These findings indicated that U. fasciata samples were under physiological stress. The incubation period significantly affected rETRmax and showed that the organism developed time-dependent adaptation responses. Alpha, a photosynthetic efficiency indicator, was negatively affected by UVR, whereas the light saturation point (Ik) varied as a result of the interaction between incubation time, pH, and UVR. The findings suggest that UVR exerted a more pronounced inhibitory effect on the photosynthetic system and growth of U. fasciata than low pH. Furthermore, combined exposure to UVR and low pH resulted in stronger growth inhibition, and a significant interaction between the two stressors was observed. Low pH and UVR exposure caused increased carbonic anhydrase activity (CA), while high CO2 led to a decrease in nitrate reductase activity (NR). UV-absorbing compounds (UVACs) were significantly affected by low pH and culture duration, whereas the effect of UVR on these compounds became significant only through its interaction with the incubation period. This suggests that the effect of UVR emerges through temporal accumulation. The findings reveal that this species is capable of developing late-phase acclimation strategies in response to environmental stress factors and possesses a potential adaptive capacity to cope with future marine change scenarios.
Continue reading ‘Impact of acidification and ultraviolet radiation on the physiology of Ulva fasciata’Integrative analysis of coral plasticity and adaptations reveals key proteins driving resilience to changes in ocean carbonate chemistry
Published 14 November 2025 Science ClosedTags: adaptation, biological response, calcification, corals, laboratory, molecular biology, otherprocess, physiology
Understanding how corals adapt to changes in seawater carbonate chemistry is crucial for developing effective coral conservation strategies. Research to date has mostly focused on short-term experiments, overlooking long-term evolutionary effects. Here, we investigated the link between short-term stress responses and long-term genetic adaptations in the coral species Porites pukoensis through experiments under varying CO2 and alkalinity conditions. Our results showed that alkalinity enrichment significantly increased coral calcification rates by 35%-45% compared to high CO2 treatment, highlighting the potential of alkalinity enrichment to mitigate acidification impacts. Corals modulated relative expression levels of basic and acidic proteins in response to changes in seawater carbonate chemistry in the stress experiments. Genomic data revealed that this mechanism has been evolutionarily fixed in various organisms adapting to seawater carbonate chemistry. Additionally, both experimental and genomic results showed that extracellular matrix proteins, like collagen with von Willebrand factor type A domain, were modified in response to distinct carbonate environments. Molecular dynamics simulations and in-vitro experiments demonstrated that the structural stability of these proteins contributes to coral resilience under acidified conditions. This study established an integrated framework combining stress experiments, multi-omics analyses, molecular simulations, and in-vitro validation to identify key proteins involved in coral adaptation to acidification.
Continue reading ‘Integrative analysis of coral plasticity and adaptations reveals key proteins driving resilience to changes in ocean carbonate chemistry’Mothers know best: maternal signaling boosts larval resilience under ocean acidification conditions
Published 12 November 2025 Science ClosedTags: adaptation, biological response, fisheries, molecular biology, mollusks, morphology, mortality, otherprocess, physiology, reproduction
Highlights
- Environmental priming effectively rescued larval phenotype under OA conditions.
- Egg ‘omics were investigated to elucidate mechanism of priming across generations.
- Clam egg lipidomes were largely unperturbed by maternal low-pH exposure.
- Differentially expressed genes were identified in eggs of low-pH primed clams.
Abstract
Bivalve aquaculture is a growing sector worldwide, producing sustainable animal protein to meet growing demand from consumers. Yet, the industry remains vulnerable to environmental changes that can impact their product across life stages, especially at the larval stage. Parental priming, or the exposure of broodstock to adverse environmental conditions as they undergo gametogenesis, holds promise as a method to increase resilience in bivalve offspring. We exposed Manila clam (Ruditapes philippinarum) broodstock to low pH conditions (pH 7.4 for 78 days during gametogenesis). Larvae were produced from primed (low pH) and unprimed (ambient pH) broodstock and exposed to ambient or low pH conditions in a full factorial design. Larval phenotype in response to low pH was partially rescued by broodstock priming: larvae from low pH-exposed broodstock had better survival and growth than larvae from broodstock held under ambient conditions. Clam egg lipidomic and transcriptomic analyses were performed to determine the physiological differences associated with broodstock environmental conditions. Egg lipid abundance profiles were not significantly different between parental treatments. The egg transcriptome revealed 48 differentially expressed transcripts associated with parental environmental conditions. These genes are involved in important processes for early larval physiology, including metabolism, cell cycle, and transcriptional regulation. Broodstock clams were minimally impacted by their exposure to low pH for 78 days, however we show here that subtle maternal signals may contribute to the vastly improved larval performance observed under low pH conditions.
Continue reading ‘Mothers know best: maternal signaling boosts larval resilience under ocean acidification conditions’Effects of ocean acidification on fatty acid composition in the Antarctic snail Neobuccinum eatoni
Published 31 October 2025 Science ClosedTags: adaptation, Antarctic, biological response, laboratory, mollusks, otherprocess, physiology
Introduction: Ocean acidification (OA), resulting from the absorption of increasing atmospheric CO2 by the oceans, represents a major threat to marine organisms. Despite growing concern, the biochemical responses of Antarctic species to OA remain poorly understood.
Methods: This study investigated the impact of OA (pH 7.70 ± 0.09) on the fatty acid (FA) composition of the Antarctic snail Neobuccinum eatoni over a two-month experimental period (December 2015–March 2016). Fatty acid profiles were analyzed in multiple tissues to assess potential alterations induced by low-pH (LpH) conditions.
Results: Significant tissue-specific changes in FA composition were detected, particularly in the mantle and gill. Under LpH exposure, notable modifications occurred in long-chain polyunsaturated fatty acids (LC-PUFAs) such as 22:5n-3, 22:6n-3, and 24:5n-6. Elevated LC-PUFA levels in the mantle suggested a compensatory response to oxidative stress, while shifts in the n-3/n-6 ratios in the gill pointed to potential alterations in immune and anti-inflammatory functions.
Discussion: Indicators of homeoviscous adaptation (HVA), including PUFA/SFA ratios and mean chain length (MCL), revealed biochemical strategies used by N. eatoni to maintain membrane fluidity under acidified conditions. This study provides the first evidence of FA-based responses to elevated pCO₂ in an Antarctic gastropod, highlighting the potential of fatty acids as sensitive biomarkers of physiological adaptation to environmental stressors.
Continue reading ‘Effects of ocean acidification on fatty acid composition in the Antarctic snail Neobuccinum eatoni’The negative responses and acclimation mechanisms of Neopyropia yezoensis conchocelis filaments to short- and long-term ocean acidification
Published 30 October 2025 Science ClosedTags: adaptation, algae, biological response, growth, laboratory, molecular biology, North Pacific, otherprocess, photosynthesis, physiology
Background
Ocean acidification (OA) significantly alters the carbonate chemistry of seawater, leading to a decrease of seawater pH to impact the physiological and biochemical processes of those intertidal macroalgae. Previous studies have focused on the response of macroalgae to OA at thallus stage, while the effects at filamentous stage remain insufficiently explored.
Results
This study investigated the physiological-biochemical and molecular mechanisms of the filamentous conchocelis stage (the diploid sporophyte) of Neopyropia yezoensis responding to short- (5 days) and long-term (20 days) OA (2000 ppm CO2, pH 7.53). The results showed that short-term OA rapidly inhibited the growth and photosynthesis, suppressed chlorophyll synthesis and nitrogen assimilation, and down-regulated genes associated with photosynthesis, Calvin cycle, and carbohydrate metabolism of N. yezoensis conchocelis filaments. However, N. yezoensis conchocelis filaments showed acclimation strategies under long-term OA, in terms of metabolic reorganization, prioritizing stress tolerance over growth. Further weighted gene co-expression network analysis (WGCNA) based on the metabolomic and transcriptomic results under long-term OA showed that the strategy was manifested by the accumulation of soluble sugars as osmolytes, lipid β-oxidation compensating for energy deficits, and H+ extrusion mediated via ABC transporters.
Conclusions
This study suggested time-depended responses of N. yezoensis conchocelis filaments to OA, proving the pronounced negative effects of OA on N. yezoensis conchocelis filaments, revealing N. yezoensis conchocelis filaments could acclimate to long-term OA by resource reallocation. These findings provide new insight into the survival of N. yezoensis conchocelis filaments under OA, and facilitate the development of technologies and breeding strategies for improved acidification tolerance in N. yezoensis.
Continue reading ‘The negative responses and acclimation mechanisms of Neopyropia yezoensis conchocelis filaments to short- and long-term ocean acidification’DNA methylation plasticity drives copepod resilience to coastal high pCO2 and cadmium pollution under multigenerational exposure
Published 20 October 2025 Science ClosedTags: adaptation, biological response, crustaceans, laboratory, metals, molecular biology, mortality, multiple factors, North Pacific, otherprocess, reproduction, zooplankton
Highlights
- Fluctuating acidification caused the most Cd multigenerational toxicity in copepods.
- The adverse effects of acidification and Cd tended to intensify during F1-F3.
- The copepods potentially adapted to combined exposure in F4.
- DNA hypomethylation rendered copepods presenting the adaptive potential.
ABSTRACT
The vast majority of coastal organisms have been facing multigenerational scenarios of fluctuatingly high pCO2 and Cd pollution in their natural habitats. However, the adaptive capacity of these organisms to such combined stressors and the underlying mechanisms remain poorly understood. In this study, we conducted a multigenerational experiment (F1-F4) to investigate the adaptive responses of the marine copepod Tigriopus japonicus to combined fluctuatingly high pCO2 and Cd exposure, along with the associated mechanisms. Our findings revealed that steady high pCO2 aggravated Cd multigenerational toxicity, and it was more under fluctuating acidification. Notably, by the F4 generation, copepods potentially adapted to the combined stressors. Through transcriptomic and DNA methylation analyses of copepods from the F1 and F4 generations, we found that under combined exposure, F1 copepods likely reallocated more energy to counteract Cd toxicity; however, DNA hypermethylation inhibited Cd exclusion and detoxification/stress response pathways, ultimately compromising development and reproduction. In contrast, in the F4 generation, DNA hypomethylation enhanced processes such as cuticle repair program, compensatory mechanism (e.g., detoxification and immune response), and reproduction, consequently increasing the copepod’s fitness. These findings reveal an epigenetic basis for phenotypic acclimatization, offering marine copepods a supplementary mechanism to cope with combined stressors.
Continue reading ‘DNA methylation plasticity drives copepod resilience to coastal high pCO2 and cadmium pollution under multigenerational exposure’Physiological and metabolic plasticity in Patella caerulea enables survival in the CO2 vent systems of the Castello Aragonese (Ischia Island)
Published 20 October 2025 Science ClosedTags: adaptation, biological response, field, Mediterranean, mollusks, otherprocess, physiology, respiration, vents
Highlights:
- OA induced physiological and metabolic adjustment in P. caerulea to allow survival
- Increased RR at low pH only during summer to potentially boost energy production
- Reduced ER at low pH during summer and transplant to preserve more energy resources
- Induction of carnitine metabolism to produce more energy in low pH
- Increase of osmoregulation, oxidative stress, and nucleic acid metabolites at low pH
Abstract
Ocean acidification (OA) represents a major threat to marine ecosystems, causing detrimental effects mainly on calcifying organisms. However, the limpet Patella caerulea is one of the few calcifiers that can inhabit the naturally acidified areas of the Castello Aragonese vent systems (Ischia Island, Italy). Its presence suggests that this species may have developed tolerance or adaptive strategies to cope with OA.
Nevertheless, the specific biological mechanisms remain largely unknown. To address this gap of knowledge, in our study we conducted physiological and metabolomics analyses on resident limpet populations collected along the acidification gradient of the Castello vent systems. Additionally, we investigated the same mechanisms in specimens transplanted for 30 days from ambient pH conditions to the different pH sites of the vent.
Only during summer, OA increased respiration rates in limpets from the most acidified site and, simultaneously, reduced excretion rates and likely protein catabolism, probably to preserve more energy resources while coping with this environmental stress. Furthermore, the individuals up-regulated carnitine metabolism, potentially enhancing energy production through β-oxidation, and several metabolites involved in osmoregulation, oxidative stress, and nucleic acid mechanisms. Similar results were obtained also in limpets transplanted to low pH sites.
Overall, our results suggest that limpets exposed to acidified conditions may have developed tolerance strategies to maintain energetic reserves and allocate them among metabolic processes, which are fundamental in maintaining biological and ecological traits and distribution when facing environmental disturbance such as OA.
Continue reading ‘Physiological and metabolic plasticity in Patella caerulea enables survival in the CO2 vent systems of the Castello Aragonese (Ischia Island)’Effects of multiple stressors on embryos and emerging larvae of the American lobster
Published 14 October 2025 Science ClosedTags: adaptation, biological response, crustaceans, laboratory, morphology, multiple factors, North Atlantic, otherprocess, physiology, reproduction, temperature
Environmental changes in the ocean can impose significant physiological costs and morphological changes to many marine organisms, and early life stages such as eggs and larvae are predicted to be particularly vulnerable to climate change drivers including warming and acidification. Although sensitivity to ocean change stressors during development has the potential to influence the performance, and ultimately the recruitment, of postlarvae and juveniles, the nature and strength of physiological modifications during embryo development is understudied in the ecologically and economically important American lobster Homarus americanus. We investigated the long-term, interactive impacts of ocean acidification and ocean warming on the development and physiology of brooded lobster embryos. We exposed ovigerous females to a combination of 2 temperatures and 2 pH levels for 5 mo, throughout which we measured development, metabolic rate, biochemical composition, and enzyme activity in their brooded embryos. The physiology of American lobster embryos appears to be robust to ocean acidification conditions but sensitive to warming, particularly for metabolic traits. We also found that warming induced a reduction in the size of freshly hatched larvae. Understanding how environmental change influences these early life stages of lobsters can improve predictions for how this species will fare in a changing ocean environment.
Continue reading ‘Effects of multiple stressors on embryos and emerging larvae of the American lobster’Interspecific vulnerabilities to elevated pCO2 in the northwestern Gulf of Mexico, a baseline of sensitivity and geochemical regimes
Published 9 October 2025 Science ClosedTags: adaptation, biological response, chemistry, modeling, North Atlantic, otherprocess, regionalmodeling, review
Marine organisms rely on stable seawater conditions and vary in taxa-specific tolerances to environmental change. The capacity for acclimatization in marine taxa is dependent on local adaptation. Our ability to generate accurate global predictions starts in identifying regional responses, informing facets that fit globally in a mosaic of response to environmental extremes. The northwestern Gulf of Mexico (nwGoM) has not previously been isolated as a region with significant multi-taxon level comparisons under geochemical extremes. Therefore, we aim to procure a nwGoM regional baseline via a literature search in all known marine taxa’s response to elevated CO2 partial pressure (pCO2) coupled with real-time ecosystem modeling of this region. The baseline carbonate chemistry conditions indicate that pH, aragonite saturation state (Ωarag), and pCO2 exhibit greater temporal and spatial variability within the upper 20 m of the water column, with nearshore waters showing more pronounced seasonal spatial variation than offshore waters. Of the taxon reported, 68.5% reported a negative response to increased pCO2, whereas 31.4% showed a neutral or mixed neutral response (positive or negative). Only 11.4% of reported taxa showed a positive response to elevated pCO2. Shown here is a holistic negative response to increased pCO2 through collating external studies. Data was only found on 1.0% of the total species we recorded in the nwGoM region, highlighting a significant gap in our understanding of regional ecosystem wide sensitivity. Of the species shown here, 83% have habitat ranges within the top 20 m of the water column, and with seasonal variability they may be exposed to several extremes, modeled here but overlooked when compared to global predictions. Continuing experimental work on the reported species here will inform regional predictions to fit the global mosaic predicting the state of our oceans to future conditions.
Continue reading ‘Interspecific vulnerabilities to elevated pCO2 in the northwestern Gulf of Mexico, a baseline of sensitivity and geochemical regimes’Sibling species differently distributed around a CO2 vent show transplantation proteomic remodelling, while displaying metabolomic signatures associated with their origin
Published 2 October 2025 Science ClosedTags: adaptation, annelids, biological response, BRcommunity, field, Mediterranean, otherprocess, physiology, vents
The cellular homeostatic response (CHR) and cellular stress response (CSR) work together to maintain homeostasis. Studying phylogenetically closely-related species inhabiting different environments can help investigate the interplay between the CHR and CSR. We conducted reciprocal in situ transplant experiments in a natural CO2 vent (Ischia, Italy), using the sibling annelid species Platynereis cf.. dumerilii and Platynereis cf.. massiliensis which have been shown to have different preferential distributions around the CO2 vent. Following transplantations, we characterised the response of each individual’s proteome, metabolome, and lipidome, to short or long-term exposure to different pCO2 regimes (i.e., high and low), and confirmed its genetic identity. Here we show that different components of the CHR and CSR are utilised at different rates when Platynereis spp. are exposed to different pCO2 regimes, with cellular responses shown to be conserved across species. Metabolome and lipidome responses were dependent on regime of origin, and changed relatively slowly, whereas proteome responses were dependent on transplant type and changed more rapidly. Our results provide new insights to improve our understanding of the interplay between different cellular physiological responses involved in defining the functional phenotype of marine species, and their ability to acclimatise to future projected high pCO2 conditions.
Continue reading ‘Sibling species differently distributed around a CO2 vent show transplantation proteomic remodelling, while displaying metabolomic signatures associated with their origin’Opposing physiological performances of two coexisting gastropods to changing ocean climate
Published 18 September 2025 Science ClosedTags: adaptation, biological response, growth, laboratory, mollusks, morphology, multiple factors, otherprocess, physiology, South Pacific, temperature
The impact of climate change on the structure of ecological communities will be influenced by how different species respond to changing environmental conditions. In this study, we investigated the effects of increased temperature (summer Control, 21 °C; HT, 24 °C) and elevated CO2 levels (Control, 400 ppm; OA, 1000 ppm) on two species of co-occurring temperate gastropods – Turbo undulatus and Austrocochlea odontis. Biological responses to simulated future conditions were measured as growth rates (shell and tissue) and metabolic rates across thermal ramps (temperatures ranging from 15 °C to 38 °C) after 8 weeks of exposure. We found that T. undulatus exposed to HT, OA or HT × OA conditions had a higher metabolic rate throughout their thermal curve than control conditions. In addition, the temperature at which individuals had maximum metabolic rate (TMMR) was higher in animals acclimated to HT × OA than in other conditions, potentially demonstrating acclimation. In contrast, A. odontis showed antagonistic effects in response to OA and HT; metabolism was lowest under OA but highest under HT. Furthermore, TMMR was reduced in A. odontis exposed to HT and the combination of HT x OA. In terms of growth, T. undulatus exposed to HT and HT × OA grew three times more in shell length and ∼20-30% in weight compared to the control group or those exposed to only OA. In contrast, no treatment had a significant effect on growth in A. odontis. Overall, our findings suggest that the impact of ocean acidification and heating on metabolic function can differ between coexisting species, possibly depending on their evolutionary and life history strategies, and these differential responses could have significant implications for the structure of ecological communities.
Continue reading ‘Opposing physiological performances of two coexisting gastropods to changing ocean climate’Transgenerational plasticity responses differ across genetically distinct families in the Sydney rock oyster, Saccostrea glomerata
Published 12 September 2025 Science ClosedTags: adaptation, biological response, laboratory, mollusks, morphology, otherprocess, reproduction, respiration, South Pacific
Across the globe, marine organisms need to rapidly respond to climate change. Acclimation through the mechanism of transgenerational plasticity (TGP) is now at the forefront of research, providing hope that some marine organisms may persist into the future. To date, however, because most studies have focussed on the average phenotypic species response to climate change, we do not know whether phenotypic responses vary among genotypes. Here, we take a next critical step in TGP research to assess whether TGP responses to ocean acidification (OA) differ among genotypes of the culturally significant and iconic Sydney Rock Oyster (SRO), Saccostrea glomerata. Adults of four genetically distinct families of the SRO were exposed to ambient (410 μatm) and elevated (1000 μatm) pCO2 for 9 weeks during reproductive conditioning. Following this exposure, we performed a within family cross of each family and measured the percentage development, abnormality, shell length and respiration rate of D-veliger larvae after 48 hours in the same ambient and elevated pCO2 treatments. We found significant variability in TGP responses among families to elevated pCO2, with positive, negative, and neutral responses in larval offspring. How well we understand the adaptive potential of oysters and their capacity to mount fast responses through TGP to climate change will determine our ability to ensure the sustainability of SRO populations, marine food security and the cultural heritage of this iconic species. Combined approaches quantifying both genetic and non-genetic TGP responses are needed to determine the total adaptive potential of other marine organisms to climate change.
Continue reading ‘Transgenerational plasticity responses differ across genetically distinct families in the Sydney rock oyster, Saccostrea glomerata’The effects of ocean acidification on the epiphytic bacterial community of Sargassum thunbergii via high-throughput sequencing
Published 11 September 2025 Science ClosedTags: abundance, adaptation, algae, biological response, BRcommunity, community composition, laboratory, molecular biology, nitrogen fixation, North Pacific, otherprocess, physiology, prokaryotes
Marine macroalgae and their epiphytic bacteria have established a symbiotic relationship. Although the effects of ocean acidification (OA) on macroalgae have been extensively studied, its impact on these epiphytic bacteria remains unclear. This study investigated the OA-induced shifts in the epiphytic bacterial community of Sargassum thunbergii from Qingdao’s intertidal zone using 16S rDNA sequencing. The results indicated that elevated CO2 altered bacterial community structure and function, reducing diversity while maintaining dominant taxa but significantly changing their relative abundances. The abundances of Proteobacteria, Firmicutes, and Verrucomicrobiota declined, whereas Campylobacterota, Desulfobacterota, and Spirochaetota increased. The specific phyla like Cloacimonadota, Calditrichota and Entotheonellaeota also emerged. These shifts were linked to the environmental adaptability and stress resistance of epiphytic bacteria as well as the metabolic activities of the host algae, particularly in protein and fatty acid degradation.
Functional predictions revealed that OA primarily affected nitrogen and sulfur metabolism in the epiphytic bacterial community, with effects intensifying over time. Specifically, nitrogen fixation increased, while dark oxidation of sulfur compounds, dark sulfite oxidation, and dark sulfur oxidation decreased. In conclusion, ocean acidification directly induced changes in the abundance of epiphytic bacterial taxa with varying stress resistance and adaptability. Simultaneously, it promoted shifts in bacterial taxa closely associated with the host algal metabolic activities, ultimately reshaping the epiphytic bacterial community on S. thunbergii. These findings provided new insights into the macroalgae-epiphytic bacteria interactions under ocean acidification and provided important guidance for macroalgal cultivation.
Continue reading ‘The effects of ocean acidification on the epiphytic bacterial community of Sargassum thunbergii via high-throughput sequencing’Coping with ocean acidification: metabolic shifts in Porites corals from the Palau Archipelago
Published 9 September 2025 Science ClosedTags: adaptation, biological response, calcification, corals, field, growth, North Pacific, otherprocess, photosynthesis, physiology, respiration
Increased atmospheric CO2 levels lead to ocean acidification, threatening coral reefs. However, certain coral species thrive in naturally acidified environments, offering unique opportunities to explore potential acclimatization or adaptation strategies. We assessed the physiological and biochemical parameters of Porites cf. lobata. colonies from control and acidified sites in the Palau Archipelago. Using a holistic approach, we compared markers related to trophic state, symbiotic state, physiology, energy storage, and redox status, along with calcification and oxidative metabolism. Our findings indicate that these colonies can acclimatize to low-pH conditions by utilizing CO2 more effectively. The increased passive diffusion of CO2 through their tissues enables them to maintain photosynthesis and calcification rates by reallocating energy that would typically go toward bicarbonate uptake. However, this energy reallocation cannot maintain skeleton density. Corals expend energy to elevate pH in the extracellular calcifying fluid, which is highly energy-demanding and reduces lipid reserves, potentially compromising long-term resilience. Despite the heightened energy production requirements, oxidative stress does not appear to worsen; the colonies exhibited lower antioxidant defenses and protein damage under low-pH conditions. The absence of metabolic suppression due to stable respiration rates and increased biomass suggests modifications in metabolic pathways, likely shifting toward a Warburg-like effect. These findings highlight the potential for some corals to tolerate near-future ocean acidification, the trade-offs associated with this resilience, and the potential for cascading effects on reef ecosystems. Further research should explore corals metabolic pathways as potential coping mechanisms.
Continue reading ‘Coping with ocean acidification: metabolic shifts in Porites corals from the Palau Archipelago’What doesn´t kill you makes you stronger: the sea urchin Arbacia lixula living on volcanic CO2 vents
Published 1 September 2025 Science ClosedTags: adaptation, biological response, echinoderms, field, morphology, North Atlantic, otherprocess, vents
Anthropogenic CO2 emissions drive ocean acidification (OA), which reduces seawater pH and carbonate ion availability, threatening calcifying organisms such as sea urchins. This study examines the long-term effects of OA on Arbacia lixula using a natural volcanic CO2 vent at Fuencaliente, La Palma (Canary Islands) as an analogue of future conditions. We analyzed the external morphology, skeletal strength, mineralogy, and growth of A. lixula across three sites that differed consistently in mean pH (from 8.14 to 7.65 during low tide). Sea urchins from low pH conditions were smaller, with shorter spines and reduced jaw-to-diameter ratios, yet their tests showed higher fracture resistance than those from ambient conditions. Additionally, individuals from acidified zones showed altered growth dynamics, with fewer growth rings. Skeletal changes and growth alterations are consistent with modified mineralization processes and dietary shifts toward non-calcareous food sources. This study highlighting the morphological plasticity and resilience of A. lixula under persistent natural acidification, offering insight into how sea urchins may respond in a high-CO2 ocean.
Continue reading ‘What doesn´t kill you makes you stronger: the sea urchin Arbacia lixula living on volcanic CO2 vents’Acclimation mechanisms of reef-building coral Acropora gemmifera juveniles to long-term CO2-driven ocean acidification
Published 27 August 2025 Science ClosedTags: adaptation, biological response, corals, laboratory, molecular biology, morphology, North Pacific, otherprocess, physiology, reproduction
Ocean acidification (OA) is a major threat to the sexual recruitment of reef-building corals. Acclimation mechanisms are critical but poorly understood in reef-building corals to OA during early life stages. Here, Acropora gemmifera, a common Indo-Pacific coral cultured in in situ seawater from Luhuitou reef at three levels of pCO2 (pH 8.14, 7.83, 7.54), showed significantly delayed larval metamorphosis and juvenile growth, but adapted to long-term high pCO2. Differentially expressed genes (DEGs) emerged as a time- and dose-dependent mode of short-term response (3 days post settlement, d p.s.) and long-term acclimation (40 d p.s.), with more DEGs responding to high pCO2 (pH 7.54) than to medium pCO2 (pH 7.83). High pCO2, a presumed threatening seawater baseline for A. gemmifera juveniles, activated DNA repair, macroautophagy, microautophagy and mitophagy mechanisms to maintain cellular homeostasis, recycle cytosolic proteins and damaged organelles, and scavenge reactive oxygen species (ROS) and H+, but at the cost of delayed development through cell cycle arrest associated with epigenetic and genetic regulation at 3 d p.s.. However, A.gemmifera juveniles acclimated to high pCO2 by up-regulating cell cycle, transcription, translation, cell proliferation, cell-extracellular matrix, cell adhesion, cell communication, signal transduction, transport, binding, Symbiodiniaceae symbiosis, development and calcification from 3 d p.s. to 40 d p.s., when energy reallocation and metabolic suppression occurred for high demand but short-term energy limitation in coral cells undergoing flexible symbiosis. All results indicate that acclimation mechanisms of complicated gene expression improve larval and juvenile resilience to OA for coral population recovery and reef restoration.
Continue reading ‘Acclimation mechanisms of reef-building coral Acropora gemmifera juveniles to long-term CO2-driven ocean acidification’Impacts of ocean acidification on survival of the brown mussel (Perna perna) in Brazil
Published 27 August 2025 Science ClosedTags: adaptation, biological response, fisheries, growth, laboratory, mollusks, morphology, mortality, otherprocess, South Atlantic
The impacts of ocean acidification (OA) on seafood are recognized globally as a major threat, and OA is explicitly mentioned in the United Nations 2030 Agenda for Sustainable Development. One target of Goal 14 (SDG 14.3), life below water, is to minimize and address the impacts of OA using all levels of scientific cooperation. In 2018, the International Atomic Energy Agency launched a Coordinated Research Project (CRP), which gathered researchers from 13 different countries and aimed to evaluate the quantitative and qualitative impacts of OA on seafood. The Brazilian brown mussel Perna perna (Linné, 1858) was selected as the target species for these experiments. Low pH can disrupt the life cycle, affect survival and growth rates, and lead to a decline in mussel populations over time. Based on an agreed protocol within the CRP network, brown mussels were exposed to pH scenarios covering the present and future range of pH variability at the sampling site. The impacts on mortality, growth rate, and morphological parameters of juvenile mussels (seed) were evaluated after a 15-wk exposure in the laboratory, followed by an 8-wk recovery period in situ. Although no effect was detected for growth rate and allometric relationships during the laboratory experiment, mussel mortality was significantly higher at low pH. This effect on mortality disappeared when mussels were transferred to the field for a recovery period, and the acclimation to low pH had no carry-over effect on growth, allometric relationships, or sensory quality. Evidence of impacts from chronic lowering of pH is still needed to address species adaptation for long-term changes, which limit the prognostic power of short-term experiments.
Continue reading ‘Impacts of ocean acidification on survival of the brown mussel (Perna perna) in Brazil’Within and cross-generational effects of elevated seawater pCO2 on larval bay scallops Argopecten irradians (L)
Published 27 August 2025 Science ClosedTags: adaptation, biological response, growth, laboratory, mollusks, morphology, mortality, North Atlantic, otherprocess, reproduction
Bivalve larvae are highly susceptible to ocean acidification (OA), but there is little knowledge of the capacity of bivalve species to acclimate or adapt to changing ocean conditions. It is challenging to compare results among studies of OA reported in the literature, as there is little consistency among studies in water chemistry across OA treatments used or how OA conditions were determined. In addition, it is difficult to predict from short-term experiments how populations might respond across generations. The bay scallop, Argopecten irradians, is a good model species for such experiments because of its short generation time and importance commercially and ecologically. Bay scallops were exposed to OA conditions from embryos to metamorphosis across two generations. Ocean acidification treatment levels included historical or preindustrial “low” (pCO2 ∼450 µatm), current average “moderate” (∼800 µatm), and future “high” (∼1,350 µatm). In the first generation, high OA had negative effects on larval performance, with no survival to metamorphosis, preventing its inclusion in the second generation. Moderate OA reduced performance (survivorship and growth) relative to the low OA. In the second generation, however, there was no difference in survival between the moderate and low OA treatments, but the difference in size at metamorphosis remained. These results suggest that over two generations, bay scallops either acclimated or adapted to moderate OA. Further work is needed to determine the extent to which long-term, generational adaptation to OA is possible in the bay scallop.
Continue reading ‘Within and cross-generational effects of elevated seawater pCO2 on larval bay scallops Argopecten irradians (L)’Influence of intensified upwelling on two different Corallina officinalis Linneo 1758 populations by exploring direct and indirect effects
Published 26 August 2025 Science ClosedTags: adaptation, algae, biological response, laboratory, otherprocess, photosynthesis, physiology, South Pacific
In the perspective of a future ocean, climate change can alter upwelling systems globally. Along the Chilean coast, upwelling becomes intensified, leading to cool temperatures and low pH, which can affect common and widespread calcifying seaweed species such as Corallina officinalis. We measured physiological, biomineralogical, and palatability responses in two distinct populations originating from contrasting upwelling regimes, one from an upwelling area and the other from an upwelling shadow, by exposing them to current and future upwelling conditions. After 20 days of experimentation, photosynthetic responses such as maximum quantum yield (Fv/Fm) remained high (> 0.5) across populations. In contrast, maximal photosynthetic efficiency (rETRmax), light saturation point (Ek) and pigment content were higher in individuals exposed to future conditions, while alpha (electron transport efficiency) decreased over time. The carbonate content was higher in individuals exposed to future conditions, while the organic matter content differed between populations, with lower contents in the population originating from the site with higher environmental variability (-1.1%). Individuals exposed to future upwelling conditions presented higher soluble protein contents (2-3 mg/g wet weight) and were also more consumed by sea urchins (+162.7%). Our results indicate that the two C. officinalis populations possess strategies that confer tolerance to projected increases in upwelling, demonstrating their capacity to adapt to changing environmental conditions. However, rising herbivory pressure associated with intensified upwelling may exert a stronger influence on ecosystem dynamics, potentially altering future community composition.
Continue reading ‘Influence of intensified upwelling on two different Corallina officinalis Linneo 1758 populations by exploring direct and indirect effects’
