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Summary of ocean acidification data collected by the National Coral Reef Monitoring Program in the U.S. Pacific Islands, 2021—2023

Published 10 February 2026 Newsletters and reports Closed
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Coral reefs are among the most biologically diverse and economically valuable ecosystems on earth. They provide billions of dollars annually in food, jobs, recreation, coastal protection, and other critical ecosystem services (Brander & van Beukering, 2013; Costanza et al., 2014). However, these ecosystems are also among the most vulnerable to ocean acidification (OA). Even under the most optimistic model projections, increasing atmospheric and seawater carbon dioxide concentrations are likely to occur over the next few decades, decreasing seawater pH and reducing the availability of the carbonate ion (CO32-) building blocks that corals and other marine calcifiers use to construct reef habitat (Chan & Connolly, 2013; Jiang et al., 2023). OA threatens the persistence of coral reefs by reducing rates of coral and crustose coralline algae (CCA) calcification and accelerating rates of bioerosion, thereby lowering net production of calcium carbonate (CaCO3) and compromising the structural complexity and integrity of three-dimensional reef habitat (Cornwall et al., 2021; Hill & Hoogenboom, 2022). As a result, many of the ecological, economic, and cultural values offered by coral reefs could be significantly impacted by OA over the next century.

NOAA’s National Coral Reef Monitoring Program (NCRMP) provides a framework for long-term, national-level monitoring of the U.S.-affiliated coral reef areas. Funded jointly by the NOAA Coral Reef Conservation Program and Ocean Acidification Program, NCRMP assesses the status and trends of U.S. coral reef ecosystems and supports the management of the nation’s reefs (NOAA Coral Program, 2021). NCRMP’s long-term monitoring of OA and related coral reef ecosystem responses (NCRMP-OA) evaluates patterns and trends in carbonate chemistry and key ecosystem indicators across gradients of biogeography, oceanographic conditions, habitat types, and human impacts. These data sets are used to inform the efficacy of place-based coral reef management in close collaboration with federal, state, and jurisdictional partners.

To assess the progression of OA and impacts on coral reef ecosystems in the U.S. Pacific Islands, NCRMP-OA monitoring includes the following objectives:

  • Conduct carbonate chemistry sampling to monitor spatial variability and temporal change in pH, aragonite saturation state (Ωar), and other carbon system parameters;
  • Conduct diel carbonate chemistry water sampling and oceanographic instrument deployments at select sites;
  • Conduct census-based carbonate budget assessments to estimate rates of coral reef biological carbonate production and erosion.

This report summarizes the monitoring effort and results from 2021–2023 NCRMP-OA sampling and surveys. Additional NCRMP environmental, benthic, and fish data are not included in this report, but they can be accessed at the links provided in the Data Availability section.

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Microbial community dynamics over large spatial and environmental gradients in a subtropical ocean basin

Published 9 February 2026 Science Closed
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Microbes are fundamental to ocean ecosystem function, yet they remain understudied across broad spatial and environmental scales in dynamic regions like the Gulf of America/Gulf of Mexico (GOM). We employed DNA metabarcoding to characterize prokaryotes (16S V4–V5) and protists (18S V9) across 51 stations, spanning 16 inshore–offshore transects and three depths. Cluster analysis revealed three clusters corresponding to depth zones that integrated vertical and horizontal sampling: photic zone (inshore near surface–bottom and offshore surface), deep chlorophyll maximum (offshore), and aphotic zone (offshore near bottom). We applied group-specific generalized additive models (GAMs) to log-transformed abundance data of major taxa in the photic zone, identifying key environmental factors that explained 42%–82% of the variation in abundance. SAR11 and SAR86 were positively associated with temperature and dissolved inorganic carbon, while cyanobacterial genera (Prochlorococcus and Synechococcus) were differently impacted by nutrients, salinity, and pH in ways that often followed their expected ecological niches. Representatives of protist parasites (Syndiniales) and grazers (Sagenista) showed group-specific nonlinear associations with salinity, oxygen, nutrients, and temperature. Using GAMs, we expanded the spatial resolution of DNA sampling and predicted surface log abundances at 84 cruise sites lacking amplicon data. Indicator analysis was performed with sequence-level data, revealing several protists that were indicative of more acidic waters and the absence of any significant prokaryote indicators. Our results provide the first basin-scale survey of microbes in the GOM and highlight the need for coordinated omics and environmental sampling to improve predictions of microbial responses to changing conditions.

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Y/Ho ratios in marine sediments unveil Neoproterozoic ocean acidification

Published 28 January 2026 Science Closed
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Understanding Precambrian seawater pH is critical for unraveling Earth’s early marine environments and biospheric evolution. Yet, quantitative constraints remain elusive due to the lack of robust proxies. Here, we demonstrate that yttrium/holmium (Y/Ho) fractionation during adsorption onto marine sediments serves as a novel and reliable pH proxy. Experimental results reveal that Y/Ho fractionation in ferruginous sediments follows a pH-dependent power-law relationship, while in argillaceous sediments, it is jointly controlled by pH and salinity at low salinities (< 29‰) but stabilizes (KdY/Ho ≈ 0.4) at higher salinities (≥ 29‰). Temperature exerts a negligible influence, ensuring broad applicability across geological timescales. Leveraging these relationships, we develop a quantitative method to reconstruct paleo-seawater pH using Y/Ho ratios from coexisting ferruginous and argillaceous sediments. Validation against modern and Phanerozoic records confirms the proxy’s accuracy (e.g., pH 8.21 ± 0.22 for modern Pacific sediments). Application to Neoproterozoic meta-pelites and iron formations reveals prolonged oceanic acidification (pH 5.9–6.4), deviating from previous model-based neutral-to-alkaline estimates. This acidic state, likely sustained by CO2 outgassing from carbonatite-alkaline volcanism during Rodinia’s breakup, challenges conventional views of Precambrian ocean chemistry. Our findings provide a transformative tool for probing early Earth’s environmental dynamics and highlight the interplay between tectonics, magmatism, and marine pH evolution.

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Flow as a mediator of ecosystem engineering: hydrodynamics shape chemical modification by kelp and mussel beds

Published 28 January 2026 Science Closed
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Ecosystem engineers are organisms that modify their physical and chemical surroundings in ways that shape the structure and function of ecological communities. Physically, they build biogenic structures that modify flow, light, and habitat complexity. Chemically, they change oxygen and pH levels through metabolic processes such as photosynthesis and respiration. These modifications can either facilitate the presence of associated species by creating favorable microhabitats or inhibit them by amplifying environmental stress. Understanding the circumstances under which and how these shifts occur has become increasingly important as climate change intensifies environmental variability in coastal ecosystems. Advancing our understanding of how ecosystem engineers shape their communities requires considering how external factors, particularly flow, mediate their influence on the surrounding environment. Driven by tides, waves, and currents, flow regulates water residence time and thus the accumulation or dispersion of biologically modified water. Yet despite its central importance, the role of flow in controlling the strength and direction of ecosystem engineering remains poorly understood.

This dissertation examines how local hydrodynamics influences the capacity of marine ecosystem engineers to modify their surrounding chemical environments. It focuses on two contrasting but complementary systems: an autotroph, bull kelp (Nereocystis luetkeana), and a heterotroph, mussels (Mytilus spp.). Looking across these systems provides a broader view of how different types of engineers—those that produce oxygen through photosynthesis and those that consume it through respiration—shape their local chemical environments. By studying both systems, this work links two aspects of ecosystem engineering: 1) oxygen production and depletion, and 2) explores how flow determines when these species have the potential to act as facilitators or inhibitors within their communities. I combined field observations with laboratory and field experiments to explore how flow dynamics interact with biological traits, such as canopy structure, density, and behavior, to determine when these engineers act as facilitators or inhibitors within their communities. Across chapters, the work progresses from identifying environmental controls on kelp-driven chemical modification (Chapter 1) to isolating mechanistic feedbacks between flow, mussel behavior, and chemistry (Chapter 2), and then investigating density effects on chemistry and behavior by out-planting manipulated mussel aggregations in natural conditions (Chapter 3).

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Assessing sponge resilience to ocean acidification in natural reef environments

Published 28 January 2026 Science Closed
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Highlights

  • Sponges are key components of coral reefs globally providing a range of important functional roles.
  • We used in situ incubation chambers to measure chlorophyll concentrations, oxygen fluxes and microbial communities for two common Indo-Pacific sponge species (Melophlus sarasinorum and Neopetrosia chaliniformis) at a natural CO2 vent (pHT 7.6–7.7) and control site in Papua New Guinea.
  • We found little evidence for any physiological differences between vent and control sponges, and no differences in the overall microbial communities
  • Overall, our results support the emerging evidence that heterotrophic sponges will likely be resilient to future ocean acidification.

Abstract

Sponges are key components of coral reefs globally providing a range of important functional roles. While sponges are under threat from the impacts of global climate change, there is an emerging picture of sponge tolerance to ocean acidification (OA). However, to date all physiological studies on sponge tolerance to OA have been under ex-situ experimental conditions and only for a limited number of sponge species. Instead, here we used in situ incubation chambers to measure chlorophyll concentrations and oxygen fluxes for two common Indo-Pacific sponge species (Melophlus sarasinorum and Neopetrosia chaliniformis) at a natural CO2 vent (pHT 7.6–7.7) and control site in Papua New Guinea. We also explored differences between the sponge microbial community composition between control and vent locations for N. chaliniformis. We found very low concentrations of chlorophyll in both species, compared to other sponges, suggesting these species are largely heterotrophic. We also found little evidence for any physiological differences between vent and control sponges, and no differences in the overall microbial communities, except some specific microbes. Overall, our results support the emerging evidence that heterotrophic sponges will likely be resilient to future ocean acidification.

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Persistence of extreme low pH in a coralline algae habitat

Published 27 January 2026 Science Closed
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Abstract

The extent of projected ocean acidification is partly dependent on the natural variability of marine carbonate chemistry—which is higher in coastal systems than in the open ocean. However, there are limited empirical studies quantifying the rate, magnitude and drivers of coastal environmental variability, preventing accurate assessments for how species and their associated communities may respond to projected climate change. Here, we quantified the annual variability of pH, temperature and dissolved oxygen in a coralline algae reef, a globally distributed biodiverse habitat that may be one of the most sensitive to projected climate change. We found that coralline algae and their communities are exposed to pH values as low as those projected for 2100 (even under a low emission scenario) for 63% of the year, including most of autumn and all of winter. Annual fluctuations in pH ranged by 0.46 units, with identifiable patterns at diel to seasonal timescales driven by various biogeochemical factors. Biologically driven patterns in dissolved oxygen and pH were coupled at multiple periodicities, and temperature was coupled to pH during the winter. Tidal cycling additionally modulated biological forcing of pH, increasing the complexity of intra-seasonal pH variability. Forecasting this environmental variability to the future led to projections of new pH extremes well beyond all IPCC emission scenarios. However, persistent long-term exposure to low pH may increase the acclimation and adaptation potential of coralline algae and their associated communities, providing a level of optimism for the continued survival of this habitat despite sensitivity to projected climate change.

Plain Language Summary

Here, we studied how the underwater environment naturally changes during the year on a coastal reef made of coralline algae, a type of red seaweed that builds reef habitats and supports diverse marine life. These reefs are thought to be especially vulnerable to climate change, particularly ocean acidification, which lowers the pH of seawater. Unlike the open ocean, coastal areas naturally experience more variability in pH, temperature, and oxygen. Monitoring these throughout the year, we found that the coralline algae reef already experiences pH levels as low as those expected for the year 2100. In fact, for about two-thirds of the year, including all of winter, the reef was exposed to these low pH conditions. We found that pH levels also varied a lot throughout the day and between seasons, influenced by biological activity of the algae and animals living in the reef, the ebb and flow of the tide, and water temperature. With some optimism, since long-term exposure to low pH is already experienced, these algae and their ecosystems may already be somewhat adapted to future conditions. This gives hope that they will be more resilient to future climate change than previously thought.

Key Points

  • Coralline algae are naturally exposed to pH at or below future climate projections, especially during autumn and winter
  • This is driven by an interaction between physical factors (temperature, tidal cycling) and biological processes (community metabolism)
  • Given future climate projections, these pH lows may become more extreme, but prolonged exposure may increase coralline algae resilience
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Climate change and ocean acidification pose a risk to underwater cultural heritage

Published 27 January 2026 Science Closed
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Ocean acidification caused by climate change drives a spectrum of ecological impacts on the marine environment, while also posing a lurking threat to the traces of human history lying on seabeds. We present a quantitative assessment of the climate change risk to underwater cultural heritage, focusing on the vulnerability of historical stone materials to shifting ocean pH levels. We monitored the amount and rate of stone surface material loss and textural alteration triggered by natural processes of mineral dissolution and biodeterioration in submarine settings, combining field and laboratory experimentations with climate models. Stone deterioration has been minimal in pre-industrial and present times; however, escalating anthropogenic emissions might lead to an exponential surge in vulnerability, with irreversible decay processes accelerating in the next decades and centuries, constrained by material properties and shifting biofouling dynamics. Ocean acidification will dramatically challenge the protection of underwater cultural heritage, demanding urgent preservation and adaptation policies.

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Core transcriptional plasticity pave the way for fish to succeed in a high-CO2 world

Published 26 January 2026 Science Closed
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Ocean acidification (OA) can alter the physiological and behavioural traits of marine fishes, raising concerns about how wild species will adapt to rising pCO2. Using natural volcanic CO2 vents at White Island, New Zealand, as analogues for future OA conditions, we quantified behaviours in situ and sequenced the brain transcriptomes of four highly site-attached fish species from two vents and a nearby control site with ambient pCO2, of which two species exhibit increased population densities at the vent. We found that two species showed changes in habitat preferences, and all four species with significant changes in gene expression related to circadian rhythm, visual perception, and energy metabolism at the vents. Strikingly, three differentially expressed genes, a heat shock protein (HS90A) and two immediate early genes (IEGs: JUN and FOS), were central regulators for transcriptional changes across all species at the vents. Within the circadian entrainment pathway, expression changes in opsins may act as a trigger, while core clock genes and IEGs function as downstream effectors, suggesting that elevated pCO2 may reset the circadian clock in these fishes. Notably, the two species with increased populations at the vents exhibited distinct transcriptional responses in genes involved in calcium signalling, reproduction, intracellular pH regulation and energy metabolism. Together with convergent evolution in a calcium signalling gene and an HS90 facilitator, these molecular features may confer their reproduction advantages and ability to cope with elevated pCO2. Our study provides novel insights into the molecular mechanisms underlying fish responses to OA and highlights key pathways that may support survival and ecological success under a naturally high-CO2 world.

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Coastal eutrophication and freshwater inputs drive acidification in the Indian River Lagoon, Florida

Published 22 January 2026 Science Closed
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Highlights

  • First quantification of acidification throughout the IRL using Ωarag.
  • A positive relationship was found between Ωarag and salinity.
  • Ωarag had a negative relationship with dissolved nutrients.
  • Nutrients, algal blooms, and freshwater are drivers of acidification in the IRL.
  • Ωarag is important to understand eutrophication in estuaries.

Abstract

The additive effects of eutrophication and acidification in coastal environments have a wide range of implications for the health of organisms and ecosystems. In the eutrophic waters of the Indian River Lagoon (IRL), FL, USA, decreases in overall shellfish size have been reported, which may be related to coastal acidification. To better understand the relationship between acidification and eutrophication in the IRL, environmental parameters, dissolved nutrients, and aragonite saturation state (Ωarag) were monitored along the entire IRL in the 2016–2017 wet and dry seasons. Additionally, three sites in the central IRL were sampled approximately weekly from June 2016–June 2017 to observe temporal variability. For the IRL-wide survey, northern sites with higher dissolved nutrient concentrations had lower Ωarag due to nutrient pollution and harmful algal blooms, while southern sites with lower salinity had lower Ωarag related to freshwater inputs (i.e., discharges and rainfall). In the time series sampling, there was a positive correlation between Ωarag with salinity and negative correlations with dissolved nutrient concentrations. This work suggests that freshwater inputs and associated dissolved nutrients and organics have implications for acidification in the IRL, which will be important considerations for restoration efforts in the IRL and beyond.

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The internal consistency between calculated and measured variables of the marine carbonate system in Arctic open and coastal waters, case study: Atlantic Arctic

Published 21 January 2026 Science Closed
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Highlights

  • Good consistency between calculated and measured variables of the marine carbonate system in Oceanic waters.
  • Only pH and pCO2 can be calculated with good accuracy in coastal waters.
  • The nutrient data are not required to calculate accurate marine carbonate system data in this region.
  • Total Alkalinity and pH (or pCO2) can be used to obtain good quality pCO2 (or pH) data.

Abstract

The Arctic Ocean plays a crucial role in anthropogenic carbon sequestration, while also being among the regions most susceptible to Ocean Acidification (OA). To understand, quantify, and monitor the rapid biogeochemical changes in the Arctic shelves and coastal waters, it is necessary to accurately determine the complete marine carbonate system. However, the uncertainty range in the calculated values is still unclear, fogging our ability to properly estimate carbon inventory and OA. In this study, we collected samples in the Arctic open and coastal waters to estimate the internal consistency of total alkalinity (TA), pH, partial pressure of CO2 (pCO2) and dissolved inorganic carbon (DIC) when only two of them are measured and the other two calculated. In open ocean waters, calculated values generally show good consistency with observations, whereas in coastal areas, it was only possible to accurately calculate two variables: 1) pH using as input parameters pCO2 together with either TA or DIC, and 2) pCO2 using DIC and pH. Furthermore, we found that, in this dataset, using the TA estimated from its correlation with salinity together with pCO2 also allowed obtaining accurate pH values in both coastal and ocean waters. This opens a new possibility of monitoring changes in the carbon cycle by measuring only salinity and pCO2 in areas where its consistency has been evaluated. Finally, in this study, we provide guidelines for obtaining and reporting good-quality carbonate system data in Arctic coastal areas.

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Interannual variability of oceanic pH in a highly human-perturbed bay in China

Published 15 January 2026 Science Closed
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Due to anthropogenic carbon dioxide (CO2) emissions, open oceans are acidifying, and the acidification rate is relatively stable. While coastal waters experience even greater pH fluctuations from terrestrial inputs, upwelling, and biological activity, this variability necessitates detailed long-term research in these regions. Based on field observations and historical literature data from 1980 to 2016, the interannual variability of seawater pH and its driving mechanisms were analyzed in Jiaozhou Bay, a highly human-perturbed bay in China. The results revealed an overall decreasing trend in pH over the three-decade period, with a decline rate of 0.0062 years−1, which is 3.6 times faster than that observed in the open ocean, indicating significant anthropogenic impacts on pH variations in Jiaozhou Bay. The long-term pH changes showed strong correlations with coastal environmental pollution status, characterized by three distinct phases: a decline from 1980 to 1986, followed by an increase during 1991 to 2004, and subsequently another decreasing trend from 2004 to 2016. Terrestrial (including wastewater) inputs were identified as predominant anthropogenic factors influencing these pH variations. Furthermore, this study highlights that while future management should focus on reducing organic matter and nutrient inputs, particular attention should be paid to the direct impacts of dissolved inorganic carbon (DIC) from treated wastewater discharge on pH reduction.

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Ocean acidification and anthropogenic carbon in the Eastern Mediterranean Sea and the effects of acidification on marine organisms

Published 15 January 2026 Science Closed
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Ocean acidification (OA), driven by rising atmospheric carbon dioxide (CO2) levels, is a critical issue affecting our oceans. The Eastern Mediterranean Sea (EMS) remains poorly understood in terms of the carbonate system and the impact of OA, despite its key role in Levantine Intermediate Water (LIW) formation and its peculiar characteristics in buffering capacity and ongoing OA. This study provides the first comprehensive spatial and temporal assessment of carbonate system in the North-Eastern Levantine Basin, in EMS, providing essential reference data for Total Alkalinity (TA), Dissolved Inorganic Carbon (DIC), and Anthropogenic Carbon (CANT). The mean TA of the measurements was 2622.11 μmol/kg, with higher surface values in summer, reflected also in the surface salinity (S) maximum caused by strong evaporation. A clear vertical gradient was observed, with TA decreasing with depth. Hot and dry meteorological conditions contribute to increased S and TA, resulting in seasonal and vertical variations in the water column. The mean DIC of the measurements was 2291.23 μmol/kg. In contrast to the observations for TA, surface DIC values were higher in winter than in summer. The higher DIC values in winter are attributed to thermodynamic equilibrium and vertical mixing in the surface waters. This study has also investigates the presence of CANT, has infiltrated deep layers, with a mean concentration of 52.07 μmol/kg, decreasing significantly throughout the water column. These findings confirms the ongoing influence of human activities on intermediate and deep layers in EMS. To reconstruct past carbonate system dynamics, the relationships of TA and DIC were determined with salinity (S) and temperature (T) data. Long-term data from METU-IMS Erdemli Time Series (ETS) stations, collected monthly for a decade, provided valuable findings into seasonal patterns and temporal shifts in TA, DIC, and pH. The coastal station displayed clear trends in the carbonate system over time, reflecting its sensitivity to local environmental changes. In contrast, the offshore station exhibited minimal variability, indicating greater stability against seasonal and long-term fluctuations. These results highlight the heightened vulnerability of coastal waters to carbonate system changes, while offshore waters remain more stable. Understanding carbonate chemistry and acidification levels is crucial for assessing impacts on marine life. In addition to the characterization of carbonate chemistry, this study also explores OA’s biological impacts on two key organisms of the Mediterranean ecosystem: phytoplankton and mussels. Firstly, effects of elevated CO₂ on phytoplankton, an essential primary producer in aquatic food webs and global biogeochemical cycles are explored. Specifically, the study explores the impacts on phytoplankton physiology, focusing on growth rates, respiration, and photopigment content in selected species from the coccolithophores, dinoflagellates, and diatoms groups. While growth rates and respiration remained relatively stable under reduced pH conditions, photopigment content was significantly influenced by changes in seawater pH, highlighting the importance of considering environmental influences on photopigment composition. The study further investigated the effects of acidification on calcifying organisms through a global program aimed at understanding the long-term effects of acidification on key seafood species and exploring adaptation strategies with a collaborative approach. This study focused on the long-term (6 months long experiment) physiological impacts of OA on marine calcifiers, specifically Mediterranean mussel, Mytilus galloprovincialis, an abundant species and one of the most consumed non-fish marine species in Türkiye. Results indicate that OA poses a substantial threat to mussel health and survival. Reduced pH levels negatively impacted survival rates, while other physiological parameters like clearance rate, condition index, respiration, and the distribution of a radionuclide, 210Po, did not significantly change. However, lipid content and immune response were affected. Oxygen consumption decreased over time, especially at lower pH. This study underscores the potential risks of OA to the fitness of the commercially important mussel species, indicating that future OA may impact both this key seafood species and its associated ecosystems. The established baseline data are crucial for future monitoring and provide valuable insights into the vulnerability of marine organisms and ecosystems to ongoing OA. By integrating chemical, biological, and ecological perspectives, this dissertation offers a comprehensive assessment of OA in EMS. It establishes baseline data for carbonate system variables, revealing distinct spatial and temporal variations influenced by S, T, and mixing processes. By linking changes in carbonate chemistry to physiological responses in primary producers and a commercially vital shellfish species, this study highlights the ecological and economic impacts of OA in EMS. The findings emphasize the need for continued research and mitigation efforts to protect marine ecosystems and commercially important species. This integrated approach provides valuable insights into the vulnerability of marine organisms and ecosystems to ongoing OA, underscoring the significance of this research for the Mediterranean Sea.

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Time series in the Mediterranean Sea

Published 15 January 2026 Web sites and blogs Closed
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13 January 2026/Kiel/Limassol. Today, Expedition M216 set sail for the Mediterranean Sea with the research vessel METEOR. An international research team led by GEOMAR Helmholtz Centre for Ocean Research will assess the state of the Mediterranean over the coming weeks. The research is conducted as part of a time series that was last carried out in 2018. The data collected now are therefore central to assessing current and future changes in the Mediterranean Sea. Among other things, temperature, salinity, nutrients and trace gases are being investigated, as well as the stratification and circulation of the water masses.

Like the Baltic Sea and the Black Sea, the Mediterranean Sea is an inland sea connected to the global ocean only by the Strait of Gibraltar. As a result, it responds more quickly to changes. It warms more rapidly, absorbs more carbon dioxide and acidifies more strongly than the open ocean. At the same time, through its connection with the Atlantic, the Mediterranean Sea also influences the global ocean and additionally plays an important role for the regional climate, fisheries and tourism.

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Several factors come together in the Mediterranean Sea: it has a very high salinity and pronounced water circulation. The high salt concentration and temperature promotes the uptake of anthropogenic CO2. At the same time, surface water is transported relatively quickly to the depth, where it remains at a temperature of around 12 to 13°C. In addition, the circulation ensures that deep water reaches the surface, which can again absorb CO2. This creates a dynamic cycle that enables the Mediterranean Sea to bind a comparatively large amount of CO2 from the atmosphere,” explains Dr Toste Tanhua, expedition leader and chemical oceanographer at GEOMAR.

Measurements from the surface to the sea floor

The measurements cover the entire water column, i. e. all layers of the Mediterranean Sea from the surface to the sea floor. At its deepest point, the Mediterranean Sea is over five thousand metres deep. “The unique topography of the Mediterranean Sea is challenging for us. There are several basins with different conditions and water depths,” says Toste Tanhua. The expedition focuses on measuring nutrients, salinity, oxygen, alkalinity, dissolved inorganic carbon, organic carbon, CO2 and the degree of ocean acidification. This enables the researchers to deduce how the Mediterranean Sea is faring under the influence of climate change and to estimate further changes. They are also investigating the distribution of water masses, currents and the exchange between surface water and the deep ocean.

“The Med-SHIP programme gives us the opportunity to take a very close look at the individual components of the entire water column. Among other things, we will be investigating inorganic carbon. This refers to carbon that is not found in living organisms, but in rocks, water or in the atmosphere as CO2. Among other things, it is responsible for transporting CO2 between the atmosphere, the surface and deep water. As the water masses in the Mediterranean are in contact with the atmosphere relatively frequent, this is particularly interesting for us,” explains Toste Tanhua.

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Seasonal and regional dynamics of carbonate chemistry and buffering capacity in contrasting marine systems: the Northeastern Mediterranean and the Sea of Marmara

Published 12 January 2026 Science Closed
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This thesis investigates seasonal and spatial variability in carbonate system dynamics and buffering capacity across two contrasting semi enclosed Turkish seas: the oligotrophic Northeastern Mediterranean and the eutrophic Sea of Marmara. Data were collected in winter and summer on research cruises conducted in 2022–2023. High quality multi-index measurements included total alkalinity (TA), nutrients, and spectrophotometric pH. Derived carbonate system parameters were calculated with PyCO2SYS, and a standardized, layer-based approach was applied to reflect regional hydrography and vertical structure. The Sea of Marmara showed high TA, often above 2700 μmol kg⁻¹, together with elevated dissolved inorganic carbon (DIC) below the halocline due to respiration and weak ventilation. Revelle factors were high, vertical gradients in pH and aragonite saturation state were strong, and hypoxia was present in sub halocline and deep waters. In the Northeastern Mediterranean, TA and DIC were lower and more stable. Revelle factors were lower, and buffering was stronger in surface and intermediate layers, with only modest sensitivity increases at depth. Advanced indices added diagnostic value beyond the Revelle factor. In the Sea of Marmara, βDIC and γDIC were highest below the halocline, identifying where small DIC additions most strongly raise the partial pressure of carbon dioxide (pCO₂) and lower pH. γAlk and ωAlk indicated greater benefit of marginal TA gains at depth. ωDIC isolated saturation state sensitivity to carbon loading in respiration dominated layers. In the Northeastern Mediterranean, the Revelle factor captured first order seasonal shifts in well mixed winter layers, while the advanced indices flagged narrow coastal and subsurface windows of rising sensitivity. These results provide the first multi seasonal, multi-index baseline for Turkish seas. They show that eutrophication, stratification, and ventilation control local acidification risk and that advanced buffer indices sharpen process attribution. The study supports monitoring that couples carbonate chemistry with oxygen and nutrients and guides management toward nutrient reduction and protection of sub halocline habitats where buffering is weakest.

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Assessing the influence of ocean acidification on the deterioration of coral reefs in Sri Lanka

Published 1 January 2026 Science Closed
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Rising atmospheric CO2 levels have significantly increased ocean acidification (OA), endangering coral reefs, and nutrient (nitrate (NO3−), and phosphate (PO43−)) pollution also weakens the coral reef resilience. Therefore, the study evaluates the prevailing OA level over the Sri Lankan coral reef areas using the aragonite saturation state (ΩAr) and assesses the nitrate (NO3−), and phosphate (PO43−) concentrations over the coral sites. The study was conducted on coral reefs on the eastern coast (EC), southern coast (SC), northern coast (NC), and west coast (WC) of Sri Lanka from April to June 2024. A total of 63 seawater samples were collected around each coastal site for analysis. The Ω Ar were supersaturated (ΩAr> 1) and ranged from 2.98±0.04 to 4.92±0.12. Throughout the study period, the study sites had ΩAr values exceeding 2.92±0.16, indicating that the nation’s corals were resilient to deterioration, and the comparative analysis demonstrates that these sites were not vulnerable to OA. The NO3− concentrations of 2–5 µmol L− 1, from human activities, may intensify coral bleaching during heat stress. Results showed that SC (2.19±1.28 µmol L− 1) and WC (3.52±1.48 µmol L− 1) had NO3− above the permissible range, which may be due to waste discharge and high runoff. The significantly higher PO43− concentrations were reported in EC (0.35±0.07 µmol L− 1). Coral bleaching hotspot (HS) identification emphasizes how spatially distributed HS are from January to June. The OA risk assessment confirmed that climate change brought high risk to the coral reef ecosystems, which impact on the ecology and economy of Sri Lanka.

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Assessing the impact of riverine water on the Northwest Pacific using normalized total alkalinity

Published 30 December 2025 Science Closed
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The impact of riverine water was assessed using salinity-normalized Total Alkalinity observations of the Northwest Pacific, including the coastal areas of Japan (20–50° N, 120–160° E). The observational data included surface carbonate parameters obtained from decades of surveys conducted by volunteer cargo ships and research vessels in this area. This study uses data and statistical methods (e.g., re-gridding and Fourier regression) like those in a previous study that analysed air-sea CO2 flux but focuses instead on the diffusion of normalized Total Alkalinity from land. First, the seawater area affected by riverine water was identified using an Empirical Orthogonal Function analysis of normalized Total Alkalinity. The differences in normalized Total Alkalinity and Dissolved Inorganic Carbon from the surrounding area were then analysed to evaluate the potential drivers, such as riverine water supply, advection effects, and biological activities. In addition, the impact of riverine water on oceanic CO2 uptake and acidification in the study area was assessed. The analysis showed that riverine water was the main cause of the higher total Alkalinity compared to the surrounding area, whereas its contribution to the increase in Dissolved Inorganic Carbon was relatively minor. The supply of riverine water had little effect on oceanic CO2 uptake throughout the year. The supply of riverine water had a minor effect on pH but contributed to coastal acidification, as indicated by a decrease in the calcification index (Ωarg, the aragonite saturation state) by 0.09±0.01 over the past 20 years, even after accounting for the buffering effect of riverine Total Alkalinity, which reduced the overall decrease by approximately 71 %. The results of this study are expected to be further improved by enhancing observations, such as the vertical profiles of carbonate parameters, and are expected to expand to other sea areas and be applied to global budgets.

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Aquaculture of seaweeds (Saccharina latissima, Ulva spp., Gracilaria spp.) significantly improves the growth of co-cultivated bivalves in mesotrophic, but not eutrophic, estuaries

Published 29 December 2025 Science Closed
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The co-cultivation of seaweeds with bivalve shellfish is a potential strategy for protecting bivalve crops against anthropogenic coastal acidification and hypoxia. We co-cultivated seaweeds and bivalves using a succession of seaweed species according to season (winter, Saccharina latissima → spring, Ulva spp. → summer, Gracilaria spp.) together with eastern oysters (Crassostrea virginica) and blue mussels (Mytilus edulis). Bivalves and seaweeds were deployed in two estuaries that contrasted in trophic state, one mesotrophic and one eutrophic. In all five experiments in the mesotrophic system, cocultivation with seaweeds significantly increased weight- and/or shell-based growth of bivalves (p < 0.05). Growth rate increases for C. virginica were modest, with weight-based growth improving by 17–21% and shell-based growth improving by 3–27% with seaweed co-culture of all macroalgal species. For M. edulis, the effect was large; co-culture with S. latissima caused 47% and 114% increases in shell- and weight-based growth rates, respectively. In the four experiments in the eutrophic estuary, co-culture with seaweeds did not significantly improve bivalve growth. Seaweed cultivation significantly improved water quality metrics (increased pH and dissolved oxygen (DO); p < 0.05 in all cases) in and around the seaweed sites at both locations, although increases in pH and DO were modest, and even in control treatments, there were no prolonged periods of harmful pH or DO levels. An abundance of macroalgal detritus may have bolstered the diets of co-cultivated bivalves in the mesotrophic estuary, a hypothesis supported by lower chlorophyll a concentration, and therefore lower planktonic food levels, at that site. Given that seaweeds display species-specific allelopathic effects against phytoplankton, it is also possible that the presence of seaweeds altered the phytoplankton community to the benefit of the bivalves. Regardless, the findings here demonstrate that co-cultivation with seaweeds can accelerate the growth of bivalves.

Continue reading ‘Aquaculture of seaweeds (Saccharina latissima, Ulva spp., Gracilaria spp.) significantly improves the growth of co-cultivated bivalves in mesotrophic, but not eutrophic, estuaries’

Ecological stability of late Maastrichtian benthic foraminifera amidst Deccan volcanism

Published 29 December 2025 Science Closed
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Highlights

  • Benthic foraminifera assemblage at Bidart reveal a stable, mesotrophic late Maastrichtian seafloor.
  • K/Pg boundary at Bidart shows signs of ecological stress and taphonomic dissolution.
  • Deccan-induced calcification stress was restricted to surface ocean and had minimal impact on benthic foraminifera.
  • Robust test ratio and fragmentation index together serve as effective taphonomic proxies.

Abstract

The late Maastrichtian witnessed profound disruptions in biogeochemical cycles, leading to the fifth mass extinction at the Cretaceous–Paleogene (K/Pg) boundary. At Bidart section (France), the final ∼60 kyr of the Maastrichtian coincide with mercury (Hg) peaks, low magnetic susceptibility, evidence of biological stress and taphonomic alteration in planktic foraminifera, indicative of an ocean acidification event. While this event primarily appears to be a surface-ocean phenomenon, previous studies also documented a minor rise in benthic foraminiferal test fragmentation beginning 0.5 m below the K/Pg boundary, with a pronounced spike at the boundary itself.

A detailed investigation of benthic foraminifera in biozone CF1 at Bidart section (France) reveals a diverse and balanced assemblage preceding the K/Pg boundary, with minimal taphonomic alterations. At the K/Pg boundary, infaunal populations diminished, diversity declined sharply, test fragmentation intensified, yet paradoxically, the absolute abundance of genera rose markedly. Preferential preservation is evident in the dominance of robust taxa (Cibicidoides spp., Coryphostoma spp.), while a high fragmentation index reflects strong taphonomic dissolution and time-averaging. A plausible explanation for this could be CO2-rich waters mixing into the ocean interior over 100–1,000 years, driving dissolution during the ∼10,000-year deposition of the K/Pg boundary red clay. The stark contrast between the planktic and benthic census and morphometric data at Bidart section clearly constrains any Deccan-related calcification stress to the surface mixed layer. Lastly, the integrated planktic and benthic considerations re-emphasize a need to carefully separate taphonomic signals from true ecological stress.

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An autonomous pH sensor for real-time high-frequency monitoring of ocean acidification in estuarine and coastal areas

Published 26 December 2025 Science Closed
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In situ pH sensing is crucial for the real-time monitoring of ocean acidification and investigations into the marine carbon cycle. Although ion sensitive field-effect transistor (ISFET) has been proven suitable for marine pH monitoring, its supply and implementation remain challenging. An underwater pH sensor for environmental analysis (uSEA-pH) based on ISFET was developed herein, incorporating a modified commercial laboratory pH probe through engineering design. Laboratory characterization demonstrated that uSEA-pH exhibited a Nernstian response (slope −57.60 ± 1.05 mV/pH, R2 > 0.999), rapid response time (∼7 s), and low measurement uncertainty (<0.01 pH). The sensor supports a sampling frequency of 1 Hz with an average power consumption of only 0.72 W. Its compact design (self-contained with battery: Φ15 × 45 cm; miniaturized version: Φ6.4 × 21 cm) facilitates deployment on various observational platforms. During high-frequency underway monitoring in the Pearl River Estuary and Dongshan Bay, uSEA-pH successfully detected subtle pH variations (<0.05 pH). In extended in situ deployments, buoy-mounted uSEA-pH reliably recorded tidal-driven pH fluctuations in Dapeng Bay (27 days) and Xiamen Bay (7 days), generating over 2.3 million field measurements. This study presents a viable, robust, and high-resolution approach for continuous pH monitoring in estuarine and coastal areas.

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Effects of long-term ocean acidification exposure on the structural, mineralogical, and mechanical properties of sea urchin (Echinometra spp.) skeletons at a natural volcanic CO2 seep

Published 23 December 2025 Science Closed
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Two decades of mesocosm studies document generally negative effects of ocean acidification (OA) on adult sea urchin growth, feeding performance, skeletal structure, and strength. Whether experimental observations hold true in natural systems will determine whether they can be extrapolated to predict responses under ecologically relevant contexts. Here, we employ a suite of imaging, chemical, and mechanical techniques to examine the skeletal properties of two closely related sea urchin species (genus Echinometra) living at a natural carbon dioxide (CO2) seep in Japan. Test plates and spines from urchins living under elevated CO2 conditions were thinner, more porous, and had less biomineral than those at reference sites; however, tooth structure was resilient to elevated CO2. The magnesium content of the test and spines did not differ between sites; however, they exhibited reduced nanohardness and became more brittle under elevated CO2. Together, altered structural and mechanical properties may compromise the protective function of urchin skeletons at the CO2 seep. These responses have implications for ecosystem structure if urchin function is suppressed at the population level. Future work might explore the repeatability of these findings across successive species and localities to recognize generality, its limits, and the conditions that mediate the influence of OA.

Continue reading ‘Effects of long-term ocean acidification exposure on the structural, mineralogical, and mechanical properties of sea urchin (Echinometra spp.) skeletons at a natural volcanic CO2 seep’

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