Posts Tagged 'biological response'

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Ocean acidification effects on growth, survival and physiological immunity of farmed Larimichthys crocea

Published 29 January 2026 Science Closed
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Ocean acidification has become a significant global ecological issue, particularly in coastal regions with intensive aquaculture. Fish farming is a crucial component of global food security, yet research on the impact of acidification on the aquaculture performance of economically important teleosts remains limited. In this study, we reared the fast-growing large yellow croaker (Larimichthys crocea) for 30 days under three different pH conditions: severe acidification (LA, pH 7.4), moderate acidification (MA, pH 7.8), and control (HA, pH 8.1). We comprehensively evaluated growth performance, survival rate, tissue structure, antioxidant enzyme activity, and innate immunity. The results showed that the LA group exhibited suppressed growth (significantly lower than the MA group, p < 0.05), elevated cortisol and T4 levels (p < 0.05), and trends of reduced antioxidant enzyme and innate immune enzyme activities, along with organ-specific pathological changes (vacuolation, structural loosening) in gills, liver, kidneys, and intestines, though most indices showed no significant difference from the HA group. Notably, the MA group showed optimal growth performance, stable physiological and immune responses. In conclusion, while acidification did not markedly affect the survival rate of L. crocea, severe acidification (pH 7.4) induces stress responses and tissue damage. These findings suggest that L. crocea exhibits a certain degree of tolerance to the acidification conditions tested, as several physiological parameters were not significantly affected. However, when considering the overall set of observations, including histological alterations across multiple tissues and changes in plasma and tissue parameters, long-term exposure to severe acidification (pH 7.4) appears to induce tissue damage and stress-related physiological disturbances, indicating potential health risks. This study provides empirical evidence regarding the potential risk posed by projected ocean acidification on L. crocea aquaculture and supports the development of climate change adaptation strategies for coastal mariculture.

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Flow as a mediator of ecosystem engineering: hydrodynamics shape chemical modification by kelp and mussel beds

Published 28 January 2026 Science Closed
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Ecosystem engineers are organisms that modify their physical and chemical surroundings in ways that shape the structure and function of ecological communities. Physically, they build biogenic structures that modify flow, light, and habitat complexity. Chemically, they change oxygen and pH levels through metabolic processes such as photosynthesis and respiration. These modifications can either facilitate the presence of associated species by creating favorable microhabitats or inhibit them by amplifying environmental stress. Understanding the circumstances under which and how these shifts occur has become increasingly important as climate change intensifies environmental variability in coastal ecosystems. Advancing our understanding of how ecosystem engineers shape their communities requires considering how external factors, particularly flow, mediate their influence on the surrounding environment. Driven by tides, waves, and currents, flow regulates water residence time and thus the accumulation or dispersion of biologically modified water. Yet despite its central importance, the role of flow in controlling the strength and direction of ecosystem engineering remains poorly understood.

This dissertation examines how local hydrodynamics influences the capacity of marine ecosystem engineers to modify their surrounding chemical environments. It focuses on two contrasting but complementary systems: an autotroph, bull kelp (Nereocystis luetkeana), and a heterotroph, mussels (Mytilus spp.). Looking across these systems provides a broader view of how different types of engineers—those that produce oxygen through photosynthesis and those that consume it through respiration—shape their local chemical environments. By studying both systems, this work links two aspects of ecosystem engineering: 1) oxygen production and depletion, and 2) explores how flow determines when these species have the potential to act as facilitators or inhibitors within their communities. I combined field observations with laboratory and field experiments to explore how flow dynamics interact with biological traits, such as canopy structure, density, and behavior, to determine when these engineers act as facilitators or inhibitors within their communities. Across chapters, the work progresses from identifying environmental controls on kelp-driven chemical modification (Chapter 1) to isolating mechanistic feedbacks between flow, mussel behavior, and chemistry (Chapter 2), and then investigating density effects on chemistry and behavior by out-planting manipulated mussel aggregations in natural conditions (Chapter 3).

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Assessing sponge resilience to ocean acidification in natural reef environments

Published 28 January 2026 Science Closed
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Highlights

  • Sponges are key components of coral reefs globally providing a range of important functional roles.
  • We used in situ incubation chambers to measure chlorophyll concentrations, oxygen fluxes and microbial communities for two common Indo-Pacific sponge species (Melophlus sarasinorum and Neopetrosia chaliniformis) at a natural CO2 vent (pHT 7.6–7.7) and control site in Papua New Guinea.
  • We found little evidence for any physiological differences between vent and control sponges, and no differences in the overall microbial communities
  • Overall, our results support the emerging evidence that heterotrophic sponges will likely be resilient to future ocean acidification.

Abstract

Sponges are key components of coral reefs globally providing a range of important functional roles. While sponges are under threat from the impacts of global climate change, there is an emerging picture of sponge tolerance to ocean acidification (OA). However, to date all physiological studies on sponge tolerance to OA have been under ex-situ experimental conditions and only for a limited number of sponge species. Instead, here we used in situ incubation chambers to measure chlorophyll concentrations and oxygen fluxes for two common Indo-Pacific sponge species (Melophlus sarasinorum and Neopetrosia chaliniformis) at a natural CO2 vent (pHT 7.6–7.7) and control site in Papua New Guinea. We also explored differences between the sponge microbial community composition between control and vent locations for N. chaliniformis. We found very low concentrations of chlorophyll in both species, compared to other sponges, suggesting these species are largely heterotrophic. We also found little evidence for any physiological differences between vent and control sponges, and no differences in the overall microbial communities, except some specific microbes. Overall, our results support the emerging evidence that heterotrophic sponges will likely be resilient to future ocean acidification.

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Transgenerational effects of extreme weather on Manila clam resilience: implications for aquaculture sustainability

Published 27 January 2026 Science Closed
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Highlights

  • SAE+MHW synergistically impaired clams during reproduction.
  • Progeny exhibited lasting developmental delays and high mortality.
  • Long-term physiological dysfunction persisted into later life stages.
  • Compound extremes threaten bivalve aquaculture resilience.

Abstract

Extreme environmental events, including sea acidity extremes (SAE) and marine heatwaves (MHW), pose increasing threats to coastal aquaculture species. This study examined the individual and combined effects of SAE and MHW on Manila clams (Ruditapes philippinarum) and their transgenerational impacts. Adults exposed to SAE+MHW showed reduced survival, decreased condition index, lower clearance rate (CR) and assimilation efficiency (AE), elevated ammonia excretion (ER), and negative scope for growth, indicating disrupted energy budgets. Reproductive output and gonadal development were also compromised. Offspring from stressed parents exhibited lower larval survival, stunted shell growth, reduced metamorphic success, smaller settlement size, reduced juvenile (6-month-old) survival rate and disrupted energy homeostasis, revealing persistent transgenerational impacts on development and energy homeostasis. These findings suggest that parental exposure to synergistic SAE+MHW alters energy allocation and may involve epigenetic mechanisms, ultimately impairing offspring fitness. Overall, our study demonstrates that compound extreme events can severely affect metabolic resilience and cross-generational performance in Manila clams, highlighting the need for multigenerational assessments, selective breeding, and aquaculture strategies to enhance climate resilience.

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Persistence of extreme low pH in a coralline algae habitat

Published 27 January 2026 Science Closed
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Abstract

The extent of projected ocean acidification is partly dependent on the natural variability of marine carbonate chemistry—which is higher in coastal systems than in the open ocean. However, there are limited empirical studies quantifying the rate, magnitude and drivers of coastal environmental variability, preventing accurate assessments for how species and their associated communities may respond to projected climate change. Here, we quantified the annual variability of pH, temperature and dissolved oxygen in a coralline algae reef, a globally distributed biodiverse habitat that may be one of the most sensitive to projected climate change. We found that coralline algae and their communities are exposed to pH values as low as those projected for 2100 (even under a low emission scenario) for 63% of the year, including most of autumn and all of winter. Annual fluctuations in pH ranged by 0.46 units, with identifiable patterns at diel to seasonal timescales driven by various biogeochemical factors. Biologically driven patterns in dissolved oxygen and pH were coupled at multiple periodicities, and temperature was coupled to pH during the winter. Tidal cycling additionally modulated biological forcing of pH, increasing the complexity of intra-seasonal pH variability. Forecasting this environmental variability to the future led to projections of new pH extremes well beyond all IPCC emission scenarios. However, persistent long-term exposure to low pH may increase the acclimation and adaptation potential of coralline algae and their associated communities, providing a level of optimism for the continued survival of this habitat despite sensitivity to projected climate change.

Plain Language Summary

Here, we studied how the underwater environment naturally changes during the year on a coastal reef made of coralline algae, a type of red seaweed that builds reef habitats and supports diverse marine life. These reefs are thought to be especially vulnerable to climate change, particularly ocean acidification, which lowers the pH of seawater. Unlike the open ocean, coastal areas naturally experience more variability in pH, temperature, and oxygen. Monitoring these throughout the year, we found that the coralline algae reef already experiences pH levels as low as those expected for the year 2100. In fact, for about two-thirds of the year, including all of winter, the reef was exposed to these low pH conditions. We found that pH levels also varied a lot throughout the day and between seasons, influenced by biological activity of the algae and animals living in the reef, the ebb and flow of the tide, and water temperature. With some optimism, since long-term exposure to low pH is already experienced, these algae and their ecosystems may already be somewhat adapted to future conditions. This gives hope that they will be more resilient to future climate change than previously thought.

Key Points

  • Coralline algae are naturally exposed to pH at or below future climate projections, especially during autumn and winter
  • This is driven by an interaction between physical factors (temperature, tidal cycling) and biological processes (community metabolism)
  • Given future climate projections, these pH lows may become more extreme, but prolonged exposure may increase coralline algae resilience
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An experimental approach to study climate change stress in benthic marine invertebrates

Published 26 January 2026 Science Closed
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Climate change is altering ocean temperature and chemistry, with ocean warming and acidification posing serious threats to marine biodiversity, particularly for sessile or low-mobility organisms that cannot escape unfavorable conditions. The MACCIMO project investigated the effects of these stressors on the sponge Chondrilla nucula and the gastropod Hexaplex trunculus using an integrative approach that examined molecular, physiological, morphological, and symbiotic responses. By applying a common garden experiment to populations from different Mediterranean regions, the study aimed to distinguish genetic and environmental influences on stress tolerance and assess intraspecific variability. Three experimental scenarios were simulated, including a control treatment and two climate change treatments based on the “high GHG emissions” RCP 8.5 scenario. A semi-enclosed experimental system with precise control of temperature and pH was designed which can be easily replicated to support laboratory studies on the effects of climate change and ocean acidification on small marine invertebrates across multiple biological levels.

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Core transcriptional plasticity pave the way for fish to succeed in a high-CO2 world

Published 26 January 2026 Science Closed
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Ocean acidification (OA) can alter the physiological and behavioural traits of marine fishes, raising concerns about how wild species will adapt to rising pCO2. Using natural volcanic CO2 vents at White Island, New Zealand, as analogues for future OA conditions, we quantified behaviours in situ and sequenced the brain transcriptomes of four highly site-attached fish species from two vents and a nearby control site with ambient pCO2, of which two species exhibit increased population densities at the vent. We found that two species showed changes in habitat preferences, and all four species with significant changes in gene expression related to circadian rhythm, visual perception, and energy metabolism at the vents. Strikingly, three differentially expressed genes, a heat shock protein (HS90A) and two immediate early genes (IEGs: JUN and FOS), were central regulators for transcriptional changes across all species at the vents. Within the circadian entrainment pathway, expression changes in opsins may act as a trigger, while core clock genes and IEGs function as downstream effectors, suggesting that elevated pCO2 may reset the circadian clock in these fishes. Notably, the two species with increased populations at the vents exhibited distinct transcriptional responses in genes involved in calcium signalling, reproduction, intracellular pH regulation and energy metabolism. Together with convergent evolution in a calcium signalling gene and an HS90 facilitator, these molecular features may confer their reproduction advantages and ability to cope with elevated pCO2. Our study provides novel insights into the molecular mechanisms underlying fish responses to OA and highlights key pathways that may support survival and ecological success under a naturally high-CO2 world.

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Prolonged low pH reprograms carbon and nitrogen metabolism and micronutrient use in Symbiodinium kawagutii and reveals indicators for reef water quality management

Published 23 January 2026 Science Closed
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Highlights

  • Low- pH stress suppresses S. kawagutii growth by ∼50%
  • Enhanced NPQ and reduced chlorophyll indicate increased photoprotection
  • Lipid pools increase as proteins and carbohydrates are diverted to fatty acids
  • Elevated C:N ratios and Fe/Mn loss reveal nutrient limitation under acid stress
  • Multi-omics uncover upregulated CA, antioxidant enzymes, and proton pumps

Abstract

Ocean acidification is a pervasive driver of coastal and reef water-quality change. We investigated how chronic low-pH exposure representative of extreme reef scenarios (pH 7.4-7.5) reshapes the physiology and metabolism of the coral symbiont Symbiodinium kawagutii. Integrating growth assays, photophysiology, ultrastructural imaging, biochemical profiling, transcriptomics, and metabolomics, we show that low pH suppresses growth and redirects resources from biosynthesis to stress mitigation. Non-photochemical quenching increased while chlorophyll content declined, indicating photoprotective energy reallocation. Ultrastructural deterioration coincided with losses of protein and carbohydrate pools, whereas fatty-acid stores expanded, evidencing a shift in carbon storage. Elemental and trace-metal measurements revealed higher cellular C:N and significant Fe/Mn depletion, indicating micronutrient constraints under acid stress. Multi-omics analyses identified coordinated upregulation of carbonic anhydrases, vacuolar H+-ATPases, and antioxidant defenses with downregulation of nitrogen and phosphorus assimilation, forming a plastic network that maintains pH and redox homeostasis at the expense of growth. These cellular trade-offs clarify how symbiont plasticity can buffer acidified conditions while altering the quality and quantity of photosynthate available to hosts. By linking mechanistic responses to potential monitoring indicators, this study provides actionable targets to anticipate and manage acidification impacts on reef water quality and to guide restoration strategies that prioritize acid-tolerant symbiont strains and relief of micronutrient stress.

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Transcriptomic responses of the marine diatom Phaeodactylum tricornutum to high carbon and low nitrogen stress

Published 23 January 2026 Science Closed
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Diatoms play a pivotal role in global biogeochemical cycling and marine primary productivity, making them ideal model organisms for understanding how phytoplankton respond to environmental fluctuations associated with global climate change. In natural marine systems, diatoms frequently encounter simultaneous variations in carbon and nitrogen availability, yet most previous studies have examined the effects of these factors in isolation. To elucidate the integrated transcriptional mechanisms underlying diatom acclimation to coupled carbon–nitrogen (C—N) imbalance, we employed RNA sequencing (RNA‐Seq) to characterize the global transcriptional response of the model diatom Phaeodactylum tricornutum to high CO2 (~2000 μatm) and low nitrogen (10% of nitrogen concentration in f/2 medium) under parallel culture conditions. The results revealed both shared and distinct transcriptional responses between the two treatments. Key genes involved in carbon metabolism, such as phosphoglycerate mutase (PGAM_7) and dihydrolipoamide succinyltransferase (PHATRDRAFT_40430), were significantly upregulated, indicating enhanced glycolytic and TCA cycle activity. In contrast, the Calvin‐cycle enzyme fructose‐1,6‐bisphosphatase (FBPC4) was downregulated. Genes associated with nitrogen assimilation‐including nitrate reductase (PHATRDRAFT_54983), nitrite reductases (PHATRDRAFT_13154, PHATRDRAFT_8155), and ferredoxin–nitrite reductase (PHATRDRAFT_27757)‐were strongly induced under both conditions. Pathway enrichment analysis further indicated the activation of lactic acid fermentation and nitrogen salvage pathways, suggesting a metabolic shift toward energy conservation and nutrient recycling. Collectively, these findings provide an overview of the transcriptional adjustments that enable P. tricornutum to maintain C—N homeostasis under high CO2 and low nitrogen stress, offering new insights into diatom metabolic plasticity under changing ocean conditions.

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Chronic exposure to low pH negatively impacts blue mussels (Mytilus edulis) from an intertidal zone

Published 20 January 2026 Science Closed
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In intertidal ecosystems, mussels experience daily fluctuations in pH due to the biological activity, intertidal currents, freshwater inflow and anthropogenic influences. This study aimed to determine whether these short-term fluctuations enable blue mussels (Mytilus edulis) to endure long-term exposure to low pH using biological indicators (mortality rates, oxidative stress and enzyme activities). Mussels were collected from an intertidal zone in the western coast of Morocco and exposed for 6 months to seawater pH ranging from 6.6 to 8.0. Our results showed that mortality rates increased exponentially with decreasing pH, while growth rates declined linearly. At pH 6.6, mortality was observed after approximately 15 days and reached 22% at 6 months. Low pH negatively impacted the function of metabolic enzymes (glyceraldehyde-3-phosphate dehydrogenase and succinate dehydrogenase), and caused oxidative stress (elevated lipid peroxidation and protein oxidation) in the mantle, digestive gland, and whole tissues. Additionally, the activity of antioxidant enzymes catalase and superoxide dismutase increased in response to higher levels of reactive oxygen species at low pH. These findings suggest that, although mussels can inhabit intertidal zones with short-term pH fluctuations, this does not equip them with the ability to deal with chronic exposure to low pH (6.6), significantly impairing their fitness.

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Neurometabolic rewiring in squid (Sepioteuthis lessoniana) optic lobes drives behavioral plasticity and visual integration under environmental acidification

Published 20 January 2026 Science Closed
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Ocean acidification’s impacts on marine animal behavior have substantial implications for ecosystem stability. Understanding how key predators respond to acidification is crucial for predicting future ocean food web dynamics, yet the underlying neural mechanisms remain poorly understood. Here, we show that prolonged exposure to projected year 2100 acidification conditions substantially impairs predatory behavior in bigfin reef squid (Sepioteuthis lessoniana), a key invertebrate predator. Chronic acidification exposure reduces expression of acetylcholine receptors in optic lobes and alters systemic HCO₃⁻ levels and metabolic rates. Using custom electroretinogram recordings, we find that while basic visual processing remains intact, behavioral impairments likely stem from changes in downstream neural integration pathways. Transcriptomic expression analysis reveals broad reductions in energy metabolism and synaptic signaling under acute exposure, while chronic exposure induces compensatory upregulation of cellular maintenance pathways. Our findings demonstrate that while squids maintain visual capabilities through adaptive mechanisms, the energy-intensive processes of neural integration and behavioral execution are compromised. These results highlight the complex physiological trade-offs marine predators face under ocean acidification, with implications for understanding future shifts in marine ecosystem structure and function.

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Spatial dynamics of aragonite saturation state and blue carbon stocks in seagrass meadows of the Palk Bay, Southeast Coast of India

Published 19 January 2026 Science Closed
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Seagrass meadows are increasingly recognized for their role in mitigating climate change through blue carbon sequestration and their influence on local carbonate chemistry. This study investigates the spatial variability of aragonite saturation state (Ωarag) and assesses the blue carbon storage potential of seagrass meadows along the Palk Bay, Southeast Coast of India. Subsurface water samples were collected across multiple seagrass-dominated stations between May and June 2024. Key seawater carbonate system parameters, including pH, temperature, total alkalinity (TA), and salinity, were measured to calculate Ωarag using CO2SYS software. Sediment cores were analyzed for organic carbon content and bulk density to estimate carbon stock. Results revealed significant spatial variation in Ωarag, influenced by seagrass density, species composition (Cymodocea serrulata and C. rotundata), and hydrodynamic conditions. Stations with dense C. serrulata beds showed elevated Ωarag values, suggesting local amelioration of acidification stress. The mean carbon stock was estimated at 1.97 Mg C/ha−1, with higher values in more mature (> 60% cover) and dense seagrass patches. These findings highlight the dual ecological function of seagrass meadows in enhancing local carbonate saturation and functioning as effective carbon storage systems, underlining their significance in coastal ecosystem-based climate mitigation strategies.

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Northern shrimp exhibit origin-specific proteomic remodelling under ocean acidification, with limited response to ocean warming

Published 19 January 2026 Science Closed
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Highlights

  • Ocean acidification, but not warming, drives proteomic response in Northern Shrimp.
  • Shrimp from different origins show distinct molecular responses to ocean acidification.
  • St. Lawrence shrimp display the strongest protein changes to ocean acidification.
  • Local conditions shape how shrimp cope with global change drivers.
  • Conservation plans must consider regional differences in shrimp responses.

Abstract

The Northern shrimp (Pandalus borealis) is an ecologically important species and the target of one of the world’Canas largest shellfish fisheries. Yet, its habitats are rapidly changing due to human-driven climate change, with temperatures projected to increase by ∼4 °C and seawater pH to decline by 0.3 pH units the end of the century. These stressors may cause interactive effects, with responses differing among origins due to local adaptation or long-term acclimatisation. We investigated the impacts of ocean warming and acidification (individually and combined) on the proteome of female P. borealis from four geographic origins. Shrimp proteomes responded to ocean acidification, but not to warming, with marked origin-specific differences. Comparing the most favourable condition (2 °C, pH 7.75) to low pH (7.35) across tested temperatures, we detected 109 differentially abundant proteins (DAPs) in shrimp from the Saint Lawrence Estuary (SLE), six in those from the Northeast Newfoundland Coast (NNC) and Eastern Scotian Shelf (ESS), and three in the Esquiman Channel (EC). SLE shrimp showed widespread downregulation across metabolic, genetic information processing, and signalling pathways, suggesting higher sensitivity to acidification relative to other origins, where responses were muted. These findings highlight intraspecific variation in proteomic responses to ocean acidification in this commercially valuable crustacean. They confirm ocean acidification as a major concern in the context of rapid environmental change and suggest that uniform conservation strategies may be ineffective. Instead, management efforts should account for origin-specific sensitivities, reflecting the complex adaptive landscape shaping the resilience of P. borealis and other exploited marine species.

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Integrated biochemical profiling, comparative transcriptome and weighted gene co-expression network analysis to explore the response mechanism of global warming and ocean acidification to the stress of Sepia esculenta larvae

Published 16 January 2026 Science Closed
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Highlights

  • Multi-angle analysis of Sepia esculenta under global warming and ocean acidification.
  • Stress enhanced the immune defense and antioxidant defense of S.esculenta.
  • The hub genes closely related to stress resistance were identified and screened out.
  • Provided a theoretical basis for the breeding of fine varieties and pond culture.

Abstract

The Sepia esculenta has high economic value and nutritional value, and accounts for a high proportion of the catch of cephalopods in China ‘s coastal waters. Global warming and ocean acidification, as major environmental problems currently facing the world, have a serious negative influence on the survival and breeding of S. esculenta. Therefore, in the research, transcriptome sequencing and biochemical quantitative analysis were performed on the larvae of S. esculenta after high temperature, low pH and combined stress at different time points, and the differential expressed genes (DEGs) and response mechanisms were identified. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis showed that these DEGs were mainly involved in a large number of immune-related biological processes and signaling pathways, including Immune response、Phagocytosis、Regulation of DNA-templated transcription and Positive regulation of DNA-templated transcription. Then, we further explored the functional relationship between these DEGs by constructing weighted gene co-expression network and protein-protein interaction networks. We identified ten hub genes including HSP90AA1, ALDH1L1, VPS13A, MAPK8IP1 and KDM6A. These hub genes may play an important role in the face of high temperature, low pH and their combined stress at different times. Our findings not only elucidate the molecular response mechanisms of S. esculenta to environmental stress and delineate the key regulatory pathways underlying its adaptation, but also provide a theoretical foundation for advancing pond cultivation.

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Ocean acidification threatening world’s shellfish (video)

Published 15 January 2026 Media coverage Closed
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Ocean acidification and anthropogenic carbon in the Eastern Mediterranean Sea and the effects of acidification on marine organisms

Published 15 January 2026 Science Closed
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Ocean acidification (OA), driven by rising atmospheric carbon dioxide (CO2) levels, is a critical issue affecting our oceans. The Eastern Mediterranean Sea (EMS) remains poorly understood in terms of the carbonate system and the impact of OA, despite its key role in Levantine Intermediate Water (LIW) formation and its peculiar characteristics in buffering capacity and ongoing OA. This study provides the first comprehensive spatial and temporal assessment of carbonate system in the North-Eastern Levantine Basin, in EMS, providing essential reference data for Total Alkalinity (TA), Dissolved Inorganic Carbon (DIC), and Anthropogenic Carbon (CANT). The mean TA of the measurements was 2622.11 μmol/kg, with higher surface values in summer, reflected also in the surface salinity (S) maximum caused by strong evaporation. A clear vertical gradient was observed, with TA decreasing with depth. Hot and dry meteorological conditions contribute to increased S and TA, resulting in seasonal and vertical variations in the water column. The mean DIC of the measurements was 2291.23 μmol/kg. In contrast to the observations for TA, surface DIC values were higher in winter than in summer. The higher DIC values in winter are attributed to thermodynamic equilibrium and vertical mixing in the surface waters. This study has also investigates the presence of CANT, has infiltrated deep layers, with a mean concentration of 52.07 μmol/kg, decreasing significantly throughout the water column. These findings confirms the ongoing influence of human activities on intermediate and deep layers in EMS. To reconstruct past carbonate system dynamics, the relationships of TA and DIC were determined with salinity (S) and temperature (T) data. Long-term data from METU-IMS Erdemli Time Series (ETS) stations, collected monthly for a decade, provided valuable findings into seasonal patterns and temporal shifts in TA, DIC, and pH. The coastal station displayed clear trends in the carbonate system over time, reflecting its sensitivity to local environmental changes. In contrast, the offshore station exhibited minimal variability, indicating greater stability against seasonal and long-term fluctuations. These results highlight the heightened vulnerability of coastal waters to carbonate system changes, while offshore waters remain more stable. Understanding carbonate chemistry and acidification levels is crucial for assessing impacts on marine life. In addition to the characterization of carbonate chemistry, this study also explores OA’s biological impacts on two key organisms of the Mediterranean ecosystem: phytoplankton and mussels. Firstly, effects of elevated CO₂ on phytoplankton, an essential primary producer in aquatic food webs and global biogeochemical cycles are explored. Specifically, the study explores the impacts on phytoplankton physiology, focusing on growth rates, respiration, and photopigment content in selected species from the coccolithophores, dinoflagellates, and diatoms groups. While growth rates and respiration remained relatively stable under reduced pH conditions, photopigment content was significantly influenced by changes in seawater pH, highlighting the importance of considering environmental influences on photopigment composition. The study further investigated the effects of acidification on calcifying organisms through a global program aimed at understanding the long-term effects of acidification on key seafood species and exploring adaptation strategies with a collaborative approach. This study focused on the long-term (6 months long experiment) physiological impacts of OA on marine calcifiers, specifically Mediterranean mussel, Mytilus galloprovincialis, an abundant species and one of the most consumed non-fish marine species in Türkiye. Results indicate that OA poses a substantial threat to mussel health and survival. Reduced pH levels negatively impacted survival rates, while other physiological parameters like clearance rate, condition index, respiration, and the distribution of a radionuclide, 210Po, did not significantly change. However, lipid content and immune response were affected. Oxygen consumption decreased over time, especially at lower pH. This study underscores the potential risks of OA to the fitness of the commercially important mussel species, indicating that future OA may impact both this key seafood species and its associated ecosystems. The established baseline data are crucial for future monitoring and provide valuable insights into the vulnerability of marine organisms and ecosystems to ongoing OA. By integrating chemical, biological, and ecological perspectives, this dissertation offers a comprehensive assessment of OA in EMS. It establishes baseline data for carbonate system variables, revealing distinct spatial and temporal variations influenced by S, T, and mixing processes. By linking changes in carbonate chemistry to physiological responses in primary producers and a commercially vital shellfish species, this study highlights the ecological and economic impacts of OA in EMS. The findings emphasize the need for continued research and mitigation efforts to protect marine ecosystems and commercially important species. This integrated approach provides valuable insights into the vulnerability of marine organisms and ecosystems to ongoing OA, underscoring the significance of this research for the Mediterranean Sea.

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Effects of pH on growth and anatomical characters of tapeseagrass (Enhalus acoroides (Linnaeus f.) Royle)

Published 14 January 2026 Science Closed
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Enhalus acoroides (Linnaeus f.) Royle or tape seagrass plays a vital role in tropical seagrass meadows, especially in Thailand. While ocean acidification negatively affects many marine species, it may benefit tropical seagrasses. E. acoroides relies on seed dispersal for sexual reproduction, and pH variations may influence seedling development. This study examined the effects of pH levels (6, 7, 8, and 9) on E. acoroides seedling growth over 8 weeks in controlled aquariums. All treatments showed 100% seed germination during the first week. By week 2, no significant differences in biomass were observed, but by week 8, seedlings at pH 6 had the highest dry weight (0.21±0.01 g), as well as the greatest leaf number (5.64±0.15 leaves), leaf length (23.39±2.06 mm), and leaf width (4.74±0.14 mm). One-way ANOVA revealed significant differences in growth by week 8. Lower pH levels enhanced shoot and root growth, while higher pH increased root number but reduced root length. Chlorophyll content analysis showed no correlation with pH after 8 weeks. Anatomical examination revealed tannin cells, starch granules, and thick cell walls in the mesophyll, with an enlarged exodermis in lower pH treatments, suggesting an adaptation for stabilizing in muddy, acidic conditions. These findings indicate that pH influences the growth and adaptation of E. acoroides seedlings, highlighting the species resilience to acidification. Its adaptive capacity is crucial for management, as E. acoroides can survive acidification and continue providing habitat, preserving ecosystem balance.

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Co–occurring aquatic acidification and hypoxia promote methane emissions from estuarine ecosystems

Published 14 January 2026 Science Closed
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Highlights

  • Acidification, hypoxia, and the combined effect enhanced CH4 emission from estuary.
  • Acidification and hypoxia exerted contrasting regulatory mechanisms on CH4 emission.
  • Acidification raised CH4 release by suppressing methanotrophs more than methanogens.
  • Hypoxia preferentially enhanced methanogenic activity over CH4 oxidation.
  • Oxygen availability dominated CH4 dynamics under acidification–hypoxia interactions.

Abstract

Estuaries worldwide are experiencing intensifying acidification and hypoxia, driven synergistically by anthropogenic activities and global climate change. Nevertheless, their combined impact on the emissions of the potent greenhouse gas methane (CH4) and its underlying regulatory mechanisms remains poorly understood, undermining our ability to project climate feedbacks. Here, we integrated 13C stable isotope tracing, DNA/mRNA–based qPCR, and amplicon/metagenomic sequencing to unravel how acidification–hypoxia interactions regulate the complex balance between CH4 production and consumption in estuarine sediments. Results showed that aquatic acidification and hypoxia combined to significantly increase CH4 emissions from estuarine sediments (P < 0.05), in a non-additive (antagonistic) manner where oxygen availability was the dominant factor governing this response. Notably, acidification increased CH4 emissions by suppressing methanotrophy more strongly than methanogenesis, whereas hypoxia preferentially stimulated methanogenic activity over CH4 oxidation. These response patterns were further demonstrated by metagenomic sequencing and mRNA-based quantitative PCR analyses, which revealed coordinated shifts in both the relative abundance and transcriptional activity of key functional genes. These findings uncover a previously overlooked mechanism whereby the worldwide co-occurrence of acidification and hypoxia in estuarine ecosystems jointly promote CH4 emissions, providing a scientific basis for improving predictive models of the global CH4 cycle and its climate feedbacks under combined anthropogenic and climatic stressors.

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Ocean acidification modulates material flux linked with coral calcification and photosynthesis

Published 14 January 2026 Science Closed
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Coral reefs are essential for the foundation of marine ecosystems. However, ocean acidification (OA), driven by rising atmospheric carbon dioxide (CO2) threatens coral growth and biological homeostasis. This study examines two Hawaiian coral species—Montipora capitata and Pocillopora acuta to elevated pCO2 simulating OA. Utilizing pH and O2 microsensors under controlled light and dark conditions, this work characterized interspecific concentration boundary layer (CBL) traits and quantified material fluxes under ambient and elevated pCO2. The results of this study revealed that under increased pCO2, P. acuta showed a significant reduction in dark proton efflux, followed by an increase in light O2 flux, suggesting reduced calcification and enhanced photosynthesis. In contrast, M. capitata did not show any robust evidence of changes in either flux parameters under similar increased pCO2 conditions. Statistical analyses using linear models revealed several significant interactions among species, treatment, and light conditions, identifying physical, chemical, and biological drivers of species responses to increased pCO2. This study also presents several conceptual models that correlate the CBL dynamics measured here with calcification and metabolic processes, thereby justifying our findings. We indicate that elevated pCO2 exacerbates microchemical gradients in the CBL and may threaten calcification in vulnerable species such as P. acuta, while highlighting the resistance of M. capitata. Therefore, this study advances our understanding of how interspecific microenvironmental processes could influence coral responses to changing ocean chemistry.

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Assessing impacts of extreme climate and weather events on endangered pearl oysters Pinctada maxima

Published 13 January 2026 Science Closed
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Extreme climate and weather events in the ocean, especially ocean acidification (OA) and marine heatwaves (MHWs), have strikingly accelerated in the past decades, yet their compound consequences remain poorly understood. The pearl oyster (Pinctada maxima), an endangered keystone species in Indo-Pacific reef ecosystems, is highly vulnerable to such events. Here, we assessed how OA-stressed P. maxima juveniles responded to MHWs (+3 °C), based on a total of 100 individuals exposed to two weeks. Oysters reared at pH 7.7 significantly increased activities of energy-metabolizing enzymes (T-ATP and NKA) in response to MHWs, whereas both enzymes significantly decreased, albeit CMA increased, at pH 7.4. MHWs significantly depressed antioxidant enzyme activities, such as SOD at both pH levels, resulting in elevated MDA levels indicative of lipid peroxidation. Contrasting responses of immune enzymes (ACP and AKP) to MHWs were seen in oysters grown under moderately and severely acidified conditions. MHWs, also, significantly depressed expression levels of key genes related to cellular metabolism (ATP1A, ATP1B, ND5, ATPeV1F and ATPeF1A) and those associated with antioxidant defence (SOD, SOD1, SOD2, Hsp70, Hsp90 and CAT), in particular when stressed at pH 7.4. Taken together, our findings suggest that intensifying MHWs can constrain the ability of P. maxima to cope with OA and likely accelerate further population decline in this era of unprecedented climate change.

Continue reading ‘Assessing impacts of extreme climate and weather events on endangered pearl oysters Pinctada maxima’

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