Posts Tagged 'laboratory'

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Ocean acidification enhances TiO2 nanoparticle toxicity in Oryzias melastigma: dominant role of size effects in driving bioaccumulation and hepatotoxicity

Published 21 October 2025 Science Closed
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Highlights

  • OA reduces TiO₂ NPs aggregation/sedimentation, increasing NP bioaccumulation
  • NPs preferentially accumulate in liver, inducing hepatotoxicity via oxidative stress
  • Size effect outweighs biological resistance as primary NP toxicity driver under OA
  • Combined OA-NPs suppress hepatic genes, activate senescence and cell death pathways
  • First evidence quantifying hydrodynamic size dominance in OA-enhanced NP toxicity

ABSTRACT

Ocean acidification (OA) and engineered nanoparticles (NPs) pollution represent two critical global environmental challenges. Marine organisms are suffering from their combined stress. However, few studies address their combined effects, and the toxicity mechanisms of NPs under OA are largely unresolved. In this study, we investigated the responses of the marine medaka Oryzias melastigma to environmentally relevant concentration of TiO2 NPs (1.0 mg/L) under OA (pH 7.40). We found that OA alleviated the aggregation and sedimentation of NPs, and decreased the resistance ability of the marine medaka to NPs stress, leading to elevated bioaccumulation of TiO2 NPs. Notably, NPs preferentially accumulated in the liver, inducing hepatotoxicity through oxidative stress and histopathological and ultrastructural damage. Critically, an integrated biomarker approach quantified the relative contributions of size effects (58%) and biological resistance (42%) to NP toxicity under OA, demonstrating that hydrodynamic size dominates toxicity outcomes. Transcriptomic analysis further revealed suppressed hepatic gene transcription and translation, alongside activated cellular senescence and programmed cell death pathways under combined exposure. These findings provide critical insight into the combined toxicity mechanisms of NPs and OA, significantly advancing our understanding of the profound risks that NPs pose to marine ecosystems under OA conditions.

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Dulse seaweed Devaleraea mollis mitigates effects of ocean acidification on larval Pacific oysters Magallana gigas

Published 21 October 2025 Science Closed
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Ocean acidification (OA), driven by upwelling and climate change, can negatively impact the ecological and economic contribution of marine calcifiers along coasts worldwide. OA interferes with calcification, particularly in early life stages, causing mortality, reduced growth, and morphological abnormalities in shellfish such as the Pacific oyster (Magallana gigas). This issue is gaining traction as climate change intensifies, placing shellfish in wild populations and farms alike at risk. Macroalgal photosynthesis by seaweed such as Pacific dulse (Devaleraea mollis) has been proposed to provide small-scale OA refuges, but few controlled experiments quantify this effect, and none have focused on larval shellfish. This study examines the potential for Pacific dulse to mitigate OA and its effects on Pacific oyster larvae. Under continuous light for 23 days, the presence of dulse resulted in a consistent increase in seawater aragonite saturation state by 0.1-0.9, and pH by 0.1-0.5 units, depending on OA condition. Newly fertilized oysters were reared for 48 hours in the absence or presence of dulse under treatments corresponding to ambient (pH 7.8, 450 μatm CO₂), future OA (pH 7.6, 800 μatm CO₂), and future OA + upwelling (pH 7.4, 1200 μatm CO₂) seawater conditions. Dulse fully mitigated OA effects on larval size that ranged from decreases of 5% to 10%. Under the future OA + upwelling treatment, dulse presence reduced the odds of underdeveloped oyster larvae at 14 hours post fertilization (hpf), and larvae with hinge abnormalities at 24 hpf, by over 50%. Dulse induced minor changes to immune response gene expression at 48 hpf. These findings highlight the benefits of seaweed when adjacent to organisms sensitive to OA. These findings will be particularly useful for shellfish farms, habitat restoration efforts, and ocean stewardship practices as a potential mitigation strategy under the changing climate.

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DNA methylation plasticity drives copepod resilience to coastal high pCO2 and cadmium pollution under multigenerational exposure

Published 20 October 2025 Science Closed
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Highlights

  • Fluctuating acidification caused the most Cd multigenerational toxicity in copepods.
  • The adverse effects of acidification and Cd tended to intensify during F1-F3.
  • The copepods potentially adapted to combined exposure in F4.
  • DNA hypomethylation rendered copepods presenting the adaptive potential.

ABSTRACT

The vast majority of coastal organisms have been facing multigenerational scenarios of fluctuatingly high pCO2 and Cd pollution in their natural habitats. However, the adaptive capacity of these organisms to such combined stressors and the underlying mechanisms remain poorly understood. In this study, we conducted a multigenerational experiment (F1-F4) to investigate the adaptive responses of the marine copepod Tigriopus japonicus to combined fluctuatingly high pCO2 and Cd exposure, along with the associated mechanisms. Our findings revealed that steady high pCO2 aggravated Cd multigenerational toxicity, and it was more under fluctuating acidification. Notably, by the F4 generation, copepods potentially adapted to the combined stressors. Through transcriptomic and DNA methylation analyses of copepods from the F1 and F4 generations, we found that under combined exposure, F1 copepods likely reallocated more energy to counteract Cd toxicity; however, DNA hypermethylation inhibited Cd exclusion and detoxification/stress response pathways, ultimately compromising development and reproduction. In contrast, in the F4 generation, DNA hypomethylation enhanced processes such as cuticle repair program, compensatory mechanism (e.g., detoxification and immune response), and reproduction, consequently increasing the copepod’s fitness. These findings reveal an epigenetic basis for phenotypic acclimatization, offering marine copepods a supplementary mechanism to cope with combined stressors.

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Oxidative stress and histological alterations in coral Briareum violacea co-exposed to ocean acidification and microplastic stressors

Published 17 October 2025 Science Closed
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Ocean acidification and microplastic pollution are two major stressors threatening coral health, yet their combined impacts and underlying mechanisms remain poorly understood. This study investigated the combined effects of ocean acidification and microplastics exposure to coral health. Briareum violacea was exposed to pH at 7.7, 7.5, and 7.3 combined with polyethylene microplastic (PE-MP; 50 mg/L) for 21 days. Polyp length and behavioral adaptability were monitored daily, while coral was collected on days 14 and 21 to assess Symbiodiniaceae density, antioxidant enzyme activity, and histopathological alterations. Results showed that combined exposure to different pH (7.7, 7.5, and 7.3) and PE-MP significantly impaired coral condition, reduced polyp length and Symbiodiniaceae density, along with intensified oxidative stress and tissue damage compared to single stressors. These findings underscore coral vulnerability under combined stressors, emphasizing the necessity for future research to address long-term ecological consequences and resilience mechanisms in coral reef ecosystems.

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Can ocean acidification alleviate carbon deficiency in eelgrass Zostera marina clonal ramets under conditions of nutrients, sulfate and ocean acidification?

Published 16 October 2025 Science Closed
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Highlights

  • The ratio of Chl a/b is reduced by the interaction between CO2 and NO3-N.
  • The interaction between CO2 and NO3-N reduces the soluble sugar contents in leaves.
  • CO2 promotes the content of soluble protein in leaves while reduces that in roots.
  • CO2 reduces both the SOD activities of the rhizomes and the eelgrass mortality rate.
  • Eelgrass has complex carbon supply and conversion mechanisms to ensure its survival.

Abstract

Carbon deficiency in the eelgrass caused by nutrient eutrophication and high concentrations of sulfate causes eelgrass mortality; however, ocean acidification provides sufficient carbon. Thus, it is inferred that ocean acidification might reduce the carbon deficiency. To verify this hypothesis, eelgrass clonal ramets were exposed to 72—h combined conditions of ocean acidification (CO2), nitrate (NO3-N), ammonia (NH4-N), phosphate (PO4-P) and sulfate (SO4-S). The pigment contents were affected by nutrients; however, the Chl a/b ratio was inhibited by the interaction between CO2 and NO3-N and was promoted by interaction between NO3-N and NH4-N. The soluble protein contents in leaves were increased by CO2; however, the soluble protein contents in roots were reduced by CO2. The soluble sugar contents in the leaves had negatively correlation with the interaction between NO3-N and CO2. Moreover, the SOD activities of the rhizomes were inhibited by CO2. All these findings suggest that ocean acidification does not seem to effectively alleviate the deficiency of soluble carbon in eelgrass under eutrophication and high concentrations of sulfate; however, the eelgrass mortality rate was inhibited by CO2 and the interaction between PO4-P and SO4-S. Thus, eelgrass has extremely complex carbon supply and conversion mechanisms to ensure its survival under composite conditions or eelgrass has another mechanism of death in eutrophication.

Continue reading ‘Can ocean acidification alleviate carbon deficiency in eelgrass Zostera marina clonal ramets under conditions of nutrients, sulfate and ocean acidification?’

Warming, but not acidification, increases metabolism and reduces growth of redfish (Sebastes fasciatus) in the Gulf of St. Lawrence

Published 16 October 2025 Science Closed
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Understanding the effects of global change, including temperature, pH, and oxygen availability, on commercially important species is crucial for anticipating consequences for these resources and their ecosystems. In the Gulf of St. Lawrence (GSL), redfish (Sebastes spp.) were under moratorium from 1995 to 2023, but the fishery has reopened in 2024 following massive recruitment observed in 2011–2013. Despite current high abundance, little is known about their metabolic and thermal physiology. To address this, we quantified the effects of four acclimation temperatures (2.5, 5.0, 7.5, and 10.0 °C) and two ocean acidification scenarios (current and future) on standard and maximum metabolic rates (SMR and MMR), aerobic scope (AS), factorial aerobic scope, hypoxia tolerance (O2crit), food consumption, growth and food conversion efficiency (FCE) in redfish (Sebastes fasciatus Storer, 1854). SMR, MMR, and AS increased with temperature, but growth and FCE decreased with temperature, likely due to increased cost of maintenance. Food consumption was lower at 2.5 °C, but similar at higher temperatures. Redfish were less hypoxia-tolerant at higher temperatures. Except for SMR, no significant effect of pH was observed. These results suggest that future changes in the GSL will challenge redfish, with potential long-term effects on growth due to increased energy requirements.

Continue reading ‘Warming, but not acidification, increases metabolism and reduces growth of redfish (Sebastes fasciatus) in the Gulf of St. Lawrence’

The bacterial community composition of American lobster (Homarus americanus) embryos and recently hatched larvae held under different temperature and acidification conditions

Published 16 October 2025 Science Closed
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Previous research investigating the microbial community of American lobster embryos has long led researchers to believe this habitat comprised only a select few bacterial taxa. However, using 16S rRNA gene sequencing, we show this community to be more diverse than previously thought. We investigated how the bacterial communities of American lobster embryos and larvae change over embryogenesis and hatching in response to two environmental variables. Ovigerous female lobsters caught from Maine and Massachusetts were held under varying temperature and pH regimes that approximated observed and predicted warming and ocean acidification conditions in the Gulf of Maine (GoM) and Southern New England (SNE). The bacterial microbiome associated with the lobster embryos was quantified from two-time points during the experiment, and larvae were collected within 12 hours of hatching. Alpha diversity increased with each life history stage, and embryo and larvae microbiomes shared little community overlap with that in the surrounding tank water. Neither environmental conditions nor lobster origin significantly altered bacterial communities, with life history stage driving alpha and beta diversity. Embryos and larvae shared three core bacterial members identified as members of the genera Rubritalea, Delftia, and Stenotrophomonas. American lobster embryos and larvae appear to have a highly selective microhabitat for bacteria that is not altered by environmental conditions. This leads us to wonder what role the microbiome may have on a developing lobster, and where the microbiome is originating if not from the surrounding seawater.

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Low pH does not impact reproductive success but leads to negative carry-over effects between parents and larvae in a Mediterranean gastropod

Published 15 October 2025 Science Closed
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Understanding how marine organisms respond to ocean acidification across all life stages is essential for assessing the future resilience of ecosystems. We investigated the effects of long-term exposure to low pH conditions (pHT ranging from 7.95 to 7.22) on the reproductive traits and intracapsular development of Hexaplex trunculus, a predatory Mediterranean gastropod. Spawning success, fecundity, and capsule morphology were not affected by pH. However, larval development was significantly impaired at pHT lower than 7.51, with observed delayed development and fewer larvae developing successfully to the hatchling stage. Cross-transplantation of spawns between pHs indicated a negative carryover effect of parental exposure to low pH on larval development, although this was partially reversible when spawns were transferred back to the ambient pH. Notably, we observed inter-individual variability in larval growth, suggesting that phenotypic plasticity or genotype-specific tolerance may play a role in moderating sensitivity to future ocean acidification. Our study highlights the importance of considering parental exposure, natural pH variability, and within-population variation when assessing species responses to global drivers

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Effects of multiple stressors on embryos and emerging larvae of the American lobster

Published 14 October 2025 Science Closed
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Environmental changes in the ocean can impose significant physiological costs and morphological changes to many marine organisms, and early life stages such as eggs and larvae are predicted to be particularly vulnerable to climate change drivers including warming and acidification. Although sensitivity to ocean change stressors during development has the potential to influence the performance, and ultimately the recruitment, of postlarvae and juveniles, the nature and strength of physiological modifications during embryo development is understudied in the ecologically and economically important American lobster Homarus americanus. We investigated the long-term, interactive impacts of ocean acidification and ocean warming on the development and physiology of brooded lobster embryos. We exposed ovigerous females to a combination of 2 temperatures and 2 pH levels for 5 mo, throughout which we measured development, metabolic rate, biochemical composition, and enzyme activity in their brooded embryos. The physiology of American lobster embryos appears to be robust to ocean acidification conditions but sensitive to warming, particularly for metabolic traits. We also found that warming induced a reduction in the size of freshly hatched larvae. Understanding how environmental change influences these early life stages of lobsters can improve predictions for how this species will fare in a changing ocean environment.

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Identification of chitinase family members in the Crassostrea gigas and the expression patterns of Cgamcase-1 under ocean acidification

Published 14 October 2025 Science Closed
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Chitinase, as a crucial enzyme for the degradation of chitin, is involved in the construction of the chitin framework during the process of shell formation. In order to identify the members of the chitinase gene family in Crassostrea gigas and investigate their response to acidification, bioinformatic methods were employed to identify the chitinase family members and analyze their expression patterns. Eleven members of the chitinase family were identified from the C. gigas genome. All gene members contained the Glyco-18 domain, and some genes also contained the chitin-binding domain ChtBD2. These genes were predominantly located on chromosome 2, 5, 6, and 7. In the C. gigas, the chitinase family genes were clearly divided into two branches which were endochitinases and exochitinases. The chitinase family expressed across all developmental stages of the C. gigas larvae. With the development of larva, the expression level of five genes increased gradually. The expression levels of most chitinase family genes were higher in the mantle compared to other tissues. The acidic mammalian chitinase (Cgamcase-1) exhibited high expression level in the mantle, with the highest expression level in the outer fold (OF). The expression patterns of Cgamcase-1 in response to acidification were analyzed. After 3, 7, and 14 days of acidification stress, the mRNA expression of Cgamcase-1 in the mantle was 3.010-fold (P < 0.05), 4.557-fold (P < 0.001) and 4.129-fold (P < 0.001) of that in the control group, respectively. After 7 days of acidification stress, the mRNA expression of Cgamcase–1 in OF was 3.598-fold of that in the control group (P < 0.05). In situ hybridization results revealed that the positive signals for the Cgamcase-1 probe were primarily concentrated in the epithelial cell region of the outer fold, and the intensity of the positive signals significantly increased after 7 days of acidification stress, while it significantly decreased after 14 and 28 days. The study suggested that chitinase family genes might be involved in the process of larval development and adult shell formation. Cgamcase-1 participated in chitin degradation and responding to ocean acidification. This research provided important theoretical evidence and reference for understanding the role of chitinase in the shell formation process of the C. gigas and their response mechanisms under ocean acidification.

Continue reading ‘Identification of chitinase family members in the Crassostrea gigas and the expression patterns of Cgamcase-1 under ocean acidification’

The effects of high seawater PCO2 on protein oxidative damage and ubiquitination in Penaeus vannamei

Published 13 October 2025 Science Closed
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High environmental PCO2 in aquatic systems typically impairs physiology and performance in ectotherms; however, the effects of high PCO2 on protein degradation, a key process in protein homeostasis and growth, remain poorly understood. In this study, we investigated the effects of increasing environmental PCO2 (ambient, 5000 and 10,000 µatm) on metabolism, oxidative stress and protein ubiquitination (an indicator of protein degradation) in whiteleg shrimp (Penaeus vannamei). Standard metabolic rate was elevated by >2-fold at 5000 and 10,000 µatm PCO2, but this was not associated with increased post-prandial oxygen consumption or oxidative protein damage. However, levels of protein K48 ubiquitin were reduced by up to 10-fold at 10,000 µatm PCO2 compared with ambient controls, suggesting high PCO2 severely affects protein degradation. Our findings reveal that while P. vannamei appear resistant to elevated PCO2, fundamental modifications to protein degradation and homeostasis may affect long-term performance and growth in this species.

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Molecular responses of amphipod (Parhyale darvishi), to pH stress in Persian Gulf

Published 10 October 2025 Science Closed
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Climate change is driving more frequent and extreme pH fluctuations in intertidal habitats, yet the molecular mechanisms by which small crustaceans cope with acid–base stress remain poorly understood. In this study, we evaluated the transcriptional responses of the intertidal amphipod Parhyale darvishi to acute low-pH (6.0) and high-pH (9.0) challenges, simulating the extremes observed in tide pools. Following a 7-day acclimatization in aerated seawater (salinity 40–42 ppt, 24–25 °C, 12:12 h light:dark), individuals (4–7 mm length) were randomly assigned to one of three treatments: control (ambient pH 7.50–7.60), low pH (adjusted to 6.0 with 20 mL 37% HCl), or high pH (adjusted to 9.0 with 3 mL NaOH), each with two 1-L replicates containing 50 animals. After 0h, 12h and 24 h of exposure, total RNA was extracted and reverse-transcribed to cDNA. Real-time PCR assays quantified expression of five target genes: catalase (CAT), glutathione S-transferase (GST), Na⁺/K⁺-ATPase, apoptosis signal-regulating kinase 1 (ASK1), and caspase-3, with tubulin serving as the reference gene. Both pH stressors elicited significant transcriptional changes relative to controls. Under low pH, antioxidant genes CAT and GST were upregulated by approximately 2.5- and 2.1-fold, respectively, indicating activation of oxidative defense pathways. In contrast, high pH induced a more moderate antioxidant response (1.8- and 1.5-fold for CAT and GST) but triggered a pronounced apoptotic signal, with caspase-3 expression increasing nearly 3-fold. Na⁺/K⁺-ATPase transcripts rose under both treatments, reflecting osmoregulatory adjustments, while ASK1 exhibited a stronger induction in acid-stressed amphipods, suggesting stress-activated kinase signaling. These findings demonstrate that P. darvishi mounts distinct molecular responses to acid versus alkaline challenges, engaging antioxidant defenses under low pH and apoptosis-related pathways under high pH. Such differential gene expression profiles provide mechanistic insight into how intertidal amphipods cope with rapid pH swings, and underscore the utility of molecular biomarkers for assessing the resilience of coastal invertebrates under future acidification and alkalinization scenarios.

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The impact of an early exposure to 17α-ethynylestradiol on the physiology of the three-spined stickleback (Gasterosteus aculeatus) under current and future climatic scenarios

Published 9 October 2025 Science Closed
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Highlights

  • RCP8.5 scenario modulated some of the long-lasting physiological responses to EE2.
  • RCP8.5-EE2 group led to sex and tissue specific responses.
  • RCP8.5-EE2 scenario resulted in lower body length at five months post-contamination.
  • RCP8.5 reduced survival rate of embryo-larval but not juvenile stages.
  • Early-life exposure to EE2 led to stickleback feminisation.
  • Early-life exposure to EE2, led to long-lasting effect on stickleback physiological responses.

Abstract

Ocean warming and acidification are climate change related drivers that impact the physiology of marine organisms and their ability to cope with future environments. Marine ecosystems are also facing pollution from an ever-growing diversity of chemical contaminants, including endocrine disruptors. A common example is the 17α-ethynylestradiol (EE2), which can affect the endocrine regulation of fish and hence potentially impact their fitness. Thus, fish have to cope to multiple climatic and chemical stresses that can interact, influencing the overall impact on fish physiology. In this study, we investigated whether the direct and carry-over effect of early exposure to EE2 (15 ng.L−1; one month during embryo-larval development) are modulated by the RCP8.5 scenario (+3°C; -0.4 pH unit). Five months post-contamination, we measured survival, growth and reproductive axis of prepubertal sticklebacks. Our findings revealed that the survival of juveniles, when exposed to EE2 during early development, is reduced under Current but not RCP8.5 scenario. Furthermore, under RCP8.5-EE2, a significantly lower body length was observed. Sex and tissue specific responses in terms of the expression profiles of genes related to development and sexual maturation was reported. Interestingly, significant interaction between RCP8.5 and EE2 was observed for the expression of ovarian aromatase (cyp19a1a), suggesting a long-lasting estrogenic effect under RCP8.5 scenario. Additionally, the skewed sex ratios and the presence of intersex individuals in both scenarios early exposed to EE2 suggested a feminization due to EE2, which could potentially disrupt sexual maturation and future reproduction. Hence, the early EE2 exposure had carry-over physiological effects on sticklebacks, and these effects can be modulated by the climate scenario. This underscores the importance of conducting long-term multi-stress studies to comprehensively understand the vulnerability on fish populations in future environments.

Continue reading ‘The impact of an early exposure to 17α-ethynylestradiol on the physiology of the three-spined stickleback (Gasterosteus aculeatus) under current and future climatic scenarios’

Acute, static, and fluctuating ocean acidification effects on the olfactory system of the yellow shore crab, Hemigrapsus oregonensis

Published 8 October 2025 Science Closed
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Increases in atmospheric carbon dioxide (CO2) accelerate ocean acidification (OA), which has been shown to alter olfactory behaviours in marine organisms. Coastal regions currently experience pCO2 greater than end-of-century open ocean predictions with daily and seasonal fluctuations. Therefore, we hypothesized that marine organisms inhabiting the coastal regions are tolerant to the effects of OA. The acute, static, and fluctuating effects of acidification on the olfactory system were investigated in the coastal yellow shore crab (Hemigrapsus oregonensis (Dana, 1851)). After exposures, the olfactory behaviour to a food cue, putrescine, was measured, and changes in olfactory sensory receptors and neurons (OSNs) were determined using immunohistochemistry. Crabs took 3 times longer to locate the odorant and preferred it less after acute (minutes) and long-term (14 days) static exposures to OA. This impairment was correlated with a 16 to 30% decrease in olfactory receptor protein (IR25a) immunoreactivity and a 20% decrease in OSN volume. Crabs exposed to daily fluctuating pCO2 (7 days) displayed behavioural responses intermediate to crabs in control or static acidification conditions, and showed no changes in IR25a. These results indicate that despite their variable natural environment, yellow shore crabs are affected by acidification, being particularly vulnerable during sustained upwelling events (long-term static high pCO2).

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Coral calcification resistance to acidification is physiologically linked with complex intracellular calcium ion dynamics between host and symbiont cells

Published 8 October 2025 Science Closed
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Coral calcification is a highly complex process with numerous caveats regarding the mechanisms that dictate productivity and function. Ion homeostasis, however, is the foremost physiological process unanimously shared among Scleractinia and essential for calcification. Consequently, changes to the seawater environment may elicit adverse effects on ion homeostasis. With increasing climate shifts, the physicochemical regime of our global ocean is changing rapidly. Responses of coral calcification to physicochemical change prevail in having little uniformity on an unambiguous mechanism of resistance. Therefore, this study chose a relatively tolerant Hawaiian coral, Montipora capitata to focus efforts on understanding ion homeostasis under chemical seawater manipulation designed to limit calcification. Results indicate a physiological hormesis (two-phase adaptive response) of overall coral host gene expression that was not shared with algal symbionts and decoupled from calcification rates. The sole ion homeostatic mechanism shown was calcium ion regulation by both the host and symbiont cells. Calcium ion homeostasis was also found to be mechanistically different between winter and summer seasons. Thus, potentially indicating complex interactions between host and symbiont cells, as well as the ability for M. capitata to promote calcification under stress. Putatively synthesized here are the physiological cascades and mechanisms of resistance to environmental triggers of acidosis and seasonal change. This work provides insight into linking calcium ion homeostasis with coral resistance and aims to suggest this mechanism as biomolecular indicator used in future assessments to compare tolerance.

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Elevated pCO2 and temperature levels modulate the ratios of the photosynthetic methane production to CO2 fixation in the coccolithophorid Emiliania huxleyi

Published 6 October 2025 Science Closed
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Most phytoplankton species have been shown to release methane (CH4) during photosynthesis; however, little has been documented on how changed levels of CO2 at different temperatures affect their CH4 production along with photosynthetic C fixation. Here, we examined CH4 production and photosynthetic performance in the most cosmopolitan coccolithophorid, Emiliania huxleyi, grown under high (1000 μatm, HC) and ambient (415 μatm, LC) pCO2 levels at five temperatures (16, 20, 22, 24 and 27°C). The HC treatment slightly lowered the optimal temperature for growth and CH4 production, and temperature changes significantly affected both carbon fixation and CH4 production. Under suboptimal temperatures, increasing temperature from 16 to 20°C led to about 96% increase in CH4 production per POC and HC treatment further enhanced this increase by an additional 9%. In contrast, under super-optimal temperatures, a temperature rise by 4°C reduced the microalgal CH4 production per POC under HC treatment by about 24% compared to the control. The calculated CH4 production quotient (MPQ, CH4 released vs. CO2 fixed) ranged between 2 × 10−5−6 × 10−5, and showed a decreasing trend with increasing temperature under both pCO2 levels, implying that the CH4 production by this microalga is being affected by global ocean changes, and the CH4 produced by phytoplankton should be quantified and included in assessing the feedback of marine phytoplankton to climate change.

Continue reading ‘Elevated pCO2 and temperature levels modulate the ratios of the photosynthetic methane production to CO2 fixation in the coccolithophorid Emiliania huxleyi’

Thermal and acidification gradients reveal tolerance thresholds in Pocillopora acuta recruits

Published 1 October 2025 Science Closed
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Ocean warming and acidification are among the biggest threats to the persistence of coral reefs. Organismal stress tolerance thresholds are life stage specific, can vary across levels of biological organisation and also depend on natural environmental variability. Here, we exposed the early life stages of Pocillopora acuta in Kāne‘ohe Bay, Hawai‘i, USA, a common reef-building coral throughout the Pacific, to projected ocean warming and acidification scenarios. We measured ecological, physiological, biomineralisation and molecular responses across the critical transition from larvae to newly settled recruits following 6 days of exposure to diel fluctuations in temperature and pH in Control (26.8°C–27.9°C, 7.82–7.96 pHTotal), Mid (28.4°C–29.5°C, 7.65–7.79 pHTotal) and High conditions (30.2°C–31.5°C, 7.44–7.59 pHTotal). We found that P. acuta early life stages are capable of survival, settlement and calcification under all scenarios. The High conditions, however, caused a significant reduction in survival and settlement capacity, with changes in the skeletal fibre deposition patterns. Although there was limited impact on the expression of biomineralisation genes, exposure to High conditions resulted in strong transcriptomic responses including depressed metabolism, reduced ATP production and increased activity of DNA damage-repair processes, indicative of a compromised metabolic state. Collectively, our findings demonstrate that coral juveniles living in environments with large diurnal fluctuations in seawater temperature and pH, such as Kāne‘ohe Bay, can tolerate exposure to moderate projected increased temperature and reduced pH. However, under more severe environmental conditions, significant negative effects on coral cellular metabolism and overall organismal survival jeopardise species fitness and recruitment.

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Genomic analysis reveals broad adaptability of coral-killing sponge (Terpios hoshinota) under environmental stress

Published 1 October 2025 Science Closed
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The coral-killing sponge, Terpios hoshinota, poses a significant ecological threat to coral reefs, exhibiting rapid expansion and competitive overgrowth. Despite its invasiveness, the genomic basis underlying its adaptability and resilience remains largely unexplored. Here, we present a high-quality genome assembly of T. hoshinota, comprising 169.4 Mb with 40,945 predicted genes. Phylogenomic analysis estimated its divergence from other demosponges during the Ordovician (~ 471 million years ago), even though its simple morphology suggests a more ancient evolutionary origin. Comparative genomic analyses revealed enrichment of genes related to substrate adhesion, innate immunity, and developmental pathways, including expansions of Wnt signaling, homeobox genes, and cell migration gene ontologies which may contribute to its aggressive growth and resilience. Transcriptomic responses under simulated climate stress conditions (heat stress at 31 °C and acidification at 700 ppm pCO₂) indicated dynamic gene regulation, with upregulation of neurotransmitter metabolism, cellular maintenance, and ion homeostasis responses. Despite these stressors, it remained stable. This suggests that T. hoshinota exhibits strong adaptability and resilience through rapid gene regulation. In conclusion, these findings provide molecular insights into T. hoshinota’s ecological success, its potential expansion under climate change, and its broader impact on coral reef ecosystems.

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A window into the effect of ocean acidification on molluscan larval shell development using a quantitative approach

Published 30 September 2025 Science Closed
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Increasing atmospheric CO2 levels have led to decreased pH and calcium carbonate saturation (Ω) of seawater, a process referred to as ocean acidification. Ocean acidification is expected to reduce biomineralization by marine calcifiers, such as molluscs, and many studies have reported serious effects on molluscan shell development. However, it has not previously been possible to quantitatively compare these effects on tiny structures, such as larval shells, among and within species. We applied the measurement technique of micro-focus X-ray computed tomography (MXCT) to larval shells of the limpet Nipponacmea fuscoviridis to quantitatively trace the process of shell growth (shell thickness and shell density). Shell thickness and density significantly decreased in seawater with low Ω levels. Scanning electron microscopy (SEM) revealed that the surface structure of the shell in larvae cultured under low Ω was disturbed. Gene expression analysis showed that the development of shell-forming regions under low Ω was significantly reduced. MXCT analysis can quantify mineralization in tiny larval shells; in combination with other methods such as SEM and gene expression analysis, it can provide a novel perspective in the assessment of the impact and resilience of marine calcifiers to changes in the marine environment.

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Mapping the knowledge domain of ocean acidification impacts on marine microbial communities: visual exploration based on citespace

Published 29 September 2025 Science Closed
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Ocean acidification (OA) threatens marine microbial communities that underpin global biogeochemical cycles and marine food webs, however, a systematic synthesis of research progress in this area remains limited. This study presents the first comprehensive bibliometric analysis of ocean acidification impacts on microbial ecology, analyzing 495 Web of Science publications (2005-2025) using CiteSpace to characterize the field’s evolution and identify emerging frontiers. Global collaboration spans 53 countries, led primarily by China, the United States, and Germany, with the GEOMAR Helmholtz Centre for Ocean Research prominent within institutional networks. The research focus has shifted from basic chemical parameters to complex ecosystem processes, with “responses” identified as the most active contemporary research frontier. Overall, the field has matured into a highly internationalized, interdisciplinary domain. We outline four strategic directions for future work: (1) integrating advanceds molecular technologies, including multi-omics and single-cell approaches, to resolve mechanisms; (2) expanding temporal and spatial scales through global observatory networks; (3) quantifying multiple-stressor interactions, particularly with warming and deoxygenation; and (4) connecting molecular processes to biogeochemical cycles at the ecosystem level. These findings provide a data-driven roadmap for next-generation on OA–microbe interactions, essential for predicting marine ecosystem responses to accelerating environmental change and for informing evidence-based ocean conservation policy.

Continue reading ‘Mapping the knowledge domain of ocean acidification impacts on marine microbial communities: visual exploration based on citespace’

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