Predicting the pace of acidification in the California Current System (CCS), a productive upwelling system that borders the west coast of North America, is complex because the anthropogenic contribution is intertwined with other natural sources. A central question is whether acidification in the CCS will follow the pace of increasing atmospheric CO2, or if climate effects and other biogeochemical processes will either amplify or attenuate acidification. Here, we apply the boron isotope pH proxy to cold-water orange cup corals to establish a historic level of acidification in the CCS and the Salish Sea, an associated marginal sea. Through a combination of complementary modeling and geochemical approaches, we show that the CCS and Salish Sea have experienced amplified acidification over the industrial era, driven by the interaction between anthropogenic CO2 and a thermodynamic buffering effect. From this foundation, we project future acidification in the CCS under elevated CO2 emissions. The projected change in pCO2 over the 21st century will continue to outpace atmospheric CO2, posing challenges to marine ecosystems of biological, cultural, and economic importance.
Continue reading ‘A century of change in the California Current: upwelling system amplifies acidification’Posts Tagged 'paleo'
A century of change in the California Current: upwelling system amplifies acidification
Published 19 November 2025 Science ClosedTags: biological response, chemistry, corals, field, modeling, North Atlantic, paleo, regionalmodeling
Insights from a changing ocean: evolving biogeochemistry and its impacts on marine ecosystems and climate
Published 13 October 2025 Science ClosedTags: biogeochemistry, chemistry, communitymodeling, field, modeling, paleo, regionalmodeling
Marine biogeochemistry integrates chemical, biological, geological, and physical processes that are fundamental to Earth’s climate and ecosystems. As elements cycle through the ocean, atmosphere, and biosphere, they leave behind biogeochemical fingerprints that serve as proxies to track environmental change. Over the industrial era, anthropogenic CO2 emissions and other human activities have caused the oceans to change rapidly, perturbing this biogeochemical landscape. Characterizing biogeochemical shifts is critical to advance our understanding of climate-driven impacts, assess marine ecosystem health, and evaluate climate solutions. Recent advancements in biogeochemical tools and technologies have deepened our insights into oceanic change. The development of high-precision paleoproxies has extended records of ocean conditions into the pre-industrial era, while the Argo float array has enabled four-dimensional monitoring of biogeochemistry globally. High-resolution numerical modeling has also improved our ability to capture complex interactions at fine spatial and temporal scales, offering a holistic framework to understand anthropogenic impacts from past to future. Together, these technologies provide a comprehensive toolkit to characterize shifts in ocean biogeochemistry in unprecedented detail and advance our understanding of global environmental change. This thesis weaves together applications of novel biogeochemical tools to examine the drivers, impacts, and mitigation strategies of a rapidly changing ocean. Each chapter leverages diverse datasets and multiple tools to provide new insights on ocean change based on marine biogeochemistry. In Chapter 2, I combine boron-isotope measurements from cold-water corals with a biogeochemical model to reconstruct and investigate subsurface acidification trends over the industrial era in the California Current System. In Chapter 3, I combine Argo-based biogeochemical data products, archival tagging records, and machine learning methods to develop a four-dimensional species distribution model for an economically important fishery species, revealing biogeochemical constraints on its migration. In Chapter 4, I employ a high-resolution biogeochemical model of the Salish Sea to evaluate the detectability of ocean alkalinity enhancement, a marine carbon dioxide removal strategy for climate mitigation. These studies provide new frameworks and tools to investigate, monitor, and respond to a changing ocean.
Continue reading ‘Insights from a changing ocean: evolving biogeochemistry and its impacts on marine ecosystems and climate’Mid-Miocene warmth pushed fossil coral calcification to physiological limits in high-latitude reefs
Published 28 July 2025 Science ClosedTags: biological response, calcification, corals, field, growth, morphology, paleo
The history of resilience of organisms over geologic timescales serves as a reference for predicting their response to future conditions. Here we use fossil Porites coral records of skeletal growth and environmental variability from the subtropical Central Paratethys Sea to assess coral resilience to past ocean warming and acidification. These records offer a unique perspective on the calcification performance and environmental tolerances of a major present-day reef builder during the globally warm mid-Miocene CO2 maximum and subsequent climate transition (16 to 13 Ma). We found evidence for up-regulation of the pH and saturation state of the corals’ calcifying fluid as a mechanism underlying past resilience. However, this physiological control on the internal carbonate chemistry was insufficient to counteract the sub-optimal environment, resulting in an extremely low calcification rate that likely affected reef framework accretion. Our findings emphasize the influence of latitudinal seasonality on the sensitivity of coral calcification to climate change.
Continue reading ‘Mid-Miocene warmth pushed fossil coral calcification to physiological limits in high-latitude reefs’Fossilised oysters hold key to mass extinction, study finds
Published 23 July 2025 Press releases ClosedTags: chemistry, paleo
In the first and only reconstruction of ocean pH ever carried out, new research from the University of St Andrews and the University of Birmingham has discovered that a rapid acidification of oceans, due to a massive and sudden rise in atmospheric CO2, caused a mass extinction event 201 million years ago.
The study in Nature Communications it is the first true confirmation that ocean acidification occurred at this event which occurred between the Triassic – Jurassic periods. Researchers studied oyster fossils from this period to piece together the clearest picture yet of how dramatic CO2 change impacted ocean acidification and biodiversity loss.
The researchers found that the rapid rise in CO2 levels were caused by continental scale volcanic activity, thought to be related to the early stages of the supercontinent Pangaea rifting apart. The team was able to chemically ‘fingerprint’ the source of the carbon that caused the acidification, which they found to be predominantly carbon that came from the solid Earth.
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Dr Sarah Greene, Associate Professor of Palaeoclimates at the University of Birmingham and co-author of the study, said: “The mass extinction event during the Triassic-Jurassic period was over a much longer timeframe, whereas modern ocean acidification is happening at a much quicker rate. This warning from the past should give us fresh cause to step up efforts to reduce human greenhouse gas emissions that could otherwise see acidification reach or exceed levels seen during these mass extinction events.”
Continue reading ‘Fossilised oysters hold key to mass extinction, study finds’Pulses of ocean acidification at the Triassic–Jurassic boundary
Published 23 July 2025 Science ClosedTags: chemistry, field, globalmodeling, modeling, paleo
Mass extinctions have repeatedly perturbed the history of life, but their causes are often elusive. Ocean acidification has been implicated during Triassic–Jurassic environmental perturbations, but this interval lacks direct reconstructions of ocean pH. Here, we present boron isotope data from well-preserved fossil oysters, which provide evidence for acidification of ≥ 0.29 pH units coincident with a 2 ‰ negative carbon isotope excursion (the “main” CIE) following the end–Triassic extinction. These results suggest a prolonged interval of CO2-driven environmental perturbation that may have delayed ecosystem recovery. Earth system modelling with cGENIE paired with our pH constraints demonstrates this was driven by predominantly mantle-derived carbon. Ocean acidification therefore appears to be associated with three of the five largest extinction events in Earth history, highlighting the catastrophic ecological impact of major perturbations to the carbon cycle in Earth’s past, and possibly Earth’s anthropogenically perturbed future.
Continue reading ‘Pulses of ocean acidification at the Triassic–Jurassic boundary’Timing of calcification and environmental variability determine pH proxy fidelity in coastal calcifying macroalgae
Published 21 July 2025 Science ClosedTags: algae, biological response, chemistry, field, mesocosms, North Atlantic, paleo, physiology, South Pacific
Long-lived calcifying marine biota are increasingly used as paleo-archives for reconstructing ocean pH. They enable exploration of the rate and magnitude of ocean acidification in shallow-water ecosystems serving as proxies for environmental pH reconstruction. However, shallow water systems often have highly variable carbonate chemistry, and the impact of this on the accuracy of pH reconstructions from long-lived marine calcifiers is not known. In particular, a better understanding of the timing of calcification with respect to environmental pH cyclicity is needed. To test the fidelity of coastal environmental pH proxies, we assessed the synchronicity between calcification and in situ diel carbonate chemistry in a tropical (One Tree Island, Great Barrier Reef, Australia) and a temperate (Loch Sween, Scotland) location using calcifying macroalgae (rhodolith-forming coralline algae) as a model system. Calcification occurred primarily during daylight hours, meaning a recording bias was introduced when compared to the full diel pH range (< 0.02 pH units). This bias resulted in pH offsets up to 0.043 pH units over the period 1860–2020, representing up to 34% of the projected pH change from 1860 in the tropics and up to 1.8% in temperate latitudes. Therefore, when proxy records are used to extend modern instrumental records of pH, we find that this may lead to bias, indicating daytime, nighttime, and full diel pH records should be assessed separately. We suggest that temporal pH cycles should be characterized at a local scale to enable incorporation of potential biases in the application of calcifying marine macroalgae to reconstruct pH change.
Continue reading ‘Timing of calcification and environmental variability determine pH proxy fidelity in coastal calcifying macroalgae’Can sclerosponge skeletons record ocean acidification?: boron and carbon isotope ratios (δ11B and δ13C) in Acanthochaetetes wellsi from Okinoerabu Island, southwestern Japan
Published 21 July 2025 Science ClosedTags: biological response, laboratory, methods, North Pacific, paleo, porifera
Boron stable isotope ratios in biogenic calcium carbonate minerals are known to reflect the decreasing of seawater pH, and thus they can be a useful tracer to track the trend of the ocean acidification. While validation of boron isotopes as a tracer for seawater pH has mainly focused on foraminiferal and coral CaCO3, a few studies examined CaCO3 skeletons produced by sclerosponges. In this study, we investigated stable boron and carbon isotope ratios in two sclerosponge specimens (Acanthochaetetes wellsi), collected from Okinoerabu Island, Japan. Carbon isotope ratios in both specimens showed a continuous decrease over the estimated growth periods, indicating that the Suess effect is recorded in sclerosponge skeletons. In contrast, boron isotope ratios in one specimen decreased over time, but not in the other. These findings suggest further analysis of additional specimens is necessary to determine whether boron isotope ratios in sclerosponge skeletons are reliable recorder of ocean acidification.
Continue reading ‘Can sclerosponge skeletons record ocean acidification?: boron and carbon isotope ratios (δ11B and δ13C) in Acanthochaetetes wellsi from Okinoerabu Island, southwestern Japan’Ocean acidification at the Toarcian Anoxic Event captured by boron isotopes in the lime mud record
Published 16 July 2025 Science ClosedTags: biological response, brachiopods, chemistry, field, mollusks, paleo
The Toarcian Oceanic Anoxic Event (ca. 183 million years ago) marks a global mass extinction coincident with dramatic changes in climate and ocean circulation, likely driven by large igneous province emplacement. Rapid carbon dioxide release may have induced global warming, widespread ocean deoxygenation, and ocean acidification. To constrain the magnitude of ocean acidification, we present boron isotope data from three different carbonate components, lime mud (micrite), brachiopods, and bivalves, from two marine sections in SW Europe. Only data from micrite shows a temporary decrease in boron isotope composition during the Toarcian Oceanic Anoxic Event, recording an ocean acidification event, which we reproduce using a coupled biogeochemical model. The contrasting stability of boron isotope values shown by bivalves and brachiopods suggests that the investigated taxa may have been able to physiologically buffer changes in ocean pH, and are therefore poor targets for the interrogation of pH changes in Earth history.
Continue reading ‘Ocean acidification at the Toarcian Anoxic Event captured by boron isotopes in the lime mud record’Ocean acidification is erasing microscopic historians, as St. Pete scientists try to learn their secrets
Published 9 July 2025 Media coverage ClosedTags: paleo
Beneath the ocean floor, in layers of ancient sediment, lie microscopic storytellers, marine organisms called foraminifera, or “forams” for short. These single-celled protists, no larger than a grain of sand, hold within their calcium carbonate shells a detailed record of Earth’s climate history. But, rising carbon emissions and ocean acidification may be erasing their story before scientists can read it.
At the University of South Florida’s College of Marine Science in St. Petersburg, oceanographer Callie Crawford is at the forefront of a research effort to understand how ocean acidification, a direct result of human-caused climate change, is ultimately threatening the ocean’s ability to remember.
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Crawford, an early-career scientist with two degrees in marine science and a minor in chemistry, works in the Rafter Ocean, which is run by Patrick Rafter and Climate Lab. She and her team collaborate with other scientists and labs to study sediment cores pulled from the ocean floor, containing layers dating back tens of thousands of years; records that, when combined with research from other labs, help reconstruct Earth’s past climate.
Inside these cores, scientists find foraminifera shells that preserve the chemical conditions of the water they lived in, clues that help reconstruct ancient ocean temperatures, carbon levels, and other vital environmental data.
This field of study, called paleoceanography, is key to building climate models that help us predict the planet’s future.
Continue reading ‘Ocean acidification is erasing microscopic historians, as St. Pete scientists try to learn their secrets’Brachiopods and forams reduced calcification costs through morphological simplification during mass extinction events
Published 3 July 2025 Science ClosedTags: biological response, brachiopods, field, morphology, paleo, protists
Environmental stressors have exacerbated the collapse of marine ecosystems during mass extinctions. However, the survival strategies of marine species during mass extinctions remain unclear. Here, we investigated morphological evolution of brachiopods across the Permian–Triassic mass extinction (PTME) using a database of 3,225 specimens representing 1,061 species and foraminifera across the PTME and early Toarcian oceanic anoxic event (T-OAE) using a database of 757 specimens representing 12 species. We found a significant reduction in the number and proportion (plicae length/shell length) of shell plicae of brachiopods (36.4% and 60.0%, respectively) across the PTME and a significant decrease in the shell thickness of foraminifera (18.9% and 42.4% across the PTME and 36.9–61.8% across the T-OAE). We calculated that these adaptive strategies could reduce the energetic costs of calcification by more than half for brachiopods across the PTME, and by ~20–62% for foraminifera across the PTME and T-OAE, to compensate for the elevated cost of calcification due to environmental and ecological pressures. We propose that simplification of morphological features, such as reduced shell ornamentation and shell thinning, serves as a potential economic strategy for calcifying organisms to cope with extinction events by reducing energy demands, but further studies with a broader range of taxa and extinction events are needed to confirm the generality of this bioenergetic strategy.
Continue reading ‘Brachiopods and forams reduced calcification costs through morphological simplification during mass extinction events’New study shows how ‘marine revolution’ shaped ocean life
Published 7 May 2025 Press releases ClosedTags: paleo

A scanning electron micrograph of Globorotalia tumida, a calcareous planktic foraminifera. This specimen was collected from IODP Site U1559 in the South Atlantic Ocean. Credit: Chris Lowery.
Between 252 and 66 million years ago, the ocean underwent a revolution.
That’s when plankton with calcium carbonate skeletons colonized the open ocean. When they died, their remains fell like snow over large parts of the seafloor. The abundance of their skeletons over time changed the marine landscape, leading to unique rock formations and vast deposits of carbonate rock.
This buildup of carbonate minerals was an important part of the Mesozoic Marine Revolution, or MMR — a period of transformation in Earth’s oceans that helped set the stage for today’s modern marine ecosystem.
According to a new study led by researchers at The University of Texas at Austin and published in the Proceedings of the Royal Society B: Biological Sciences, the change in calcium carbonate dynamics in the ocean appears to have influenced the evolutionary trajectory of tiny but mighty sea creatures: foraminifera.
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Forams can make their skeletons out of different materials, including sediments and organic matter. The researchers found that after the MMR, calcareous forams — which build their shells by secreting calcium carbonate — flourished, going on to become the dominant type of foram living today.
The study’s lead author Katherine Faulkner, who conducted the research when she was an undergraduate student at UT, said that in addition to shedding light on foram diversity through time, the findings could help researchers learn about how other forms of marine life responded to swings in ocean chemistry over geologic time.
Continue reading ‘New study shows how ‘marine revolution’ shaped ocean life’Record of foraminifera test composition throughout the Phanerozoic
Published 17 April 2025 Science ClosedTags: biological response, morphology, paleo, protists, review
Marine calcifiers produce calcareous structures (e.g. shells, skeletons or tests) and are therefore sensitive to ocean chemistry. Nevertheless, the long-term evolutionary consequences of marine carbonate changes are not well understood. This article compares calcareous and non-calcareous responses to ocean chemistry changes throughout the Phanerozoic Eon (541 million years ago to present). To accomplish this, we calculated proportional wall-type diversity, origination rates and extinction rates for 2282 benthic foraminiferal genera. Calcareous origination and extinction rates fluctuated throughout the Palaeozoic Era (541–251.9 million years ago), but during the Mesozoic Era (251.9–66 million years ago), calcareous origination and extinction rates stabilized following the evolution of pelagic calcifiers. Despite variations in Cenozoic Era (66–0 million years ago) foraminifera diversity, calcareous wall types maintained around 77% proportional diversity. Although calcareous wall-type extinction rates decline during the Mesozoic and Cenozoic, Phanerozoic foraminifera wall-type changes during individual events are largely contingent upon contemporaneous conditions rather than overarching trends. Of the Big Five mass extinction events, calcareous wall-type proportions only decreased at the end-Permian (73% to 26% diversity) and end-Triassic (56% to 50% diversity). These results suggest long-term ocean chemistry changes were not the main driver of foraminiferal wall-type diversity through time.
Continue reading ‘Record of foraminifera test composition throughout the Phanerozoic’Quantitative reconstruction of intermediate water pH in the South China Sea based on branched tetraether lipids
Published 16 April 2025 Science ClosedTags: chemistry, field, North Pacific, paleo
The geochemical proxy of ocean pH is crucial for understanding the dynamics of ancient ocean carbon reservoirs. This study employs the cyclization index of branched glycerol dialkyl glycerol tetraether compounds (brGDGTs), widely used in terrestrial environments for paleo-pH reconstruction, to investigate the intermediate water pH in the South China Sea. The South China Sea, a semi-enclosed marginal sea in the western Pacific, serves as the study area. By collecting data including global soil datasets, subtropical soil data, samples with water depths less than 50 meters in the northern South China Sea, surface sediment samples in the South China Sea, and brGDGTs data from rock cores in the northern South China Sea, significant differences were found in the composition of brGDGTs in marine sediments compared to those in soils. This proves the in-situ self generation viewpoint of brGDGT in the ocean, mainly generated in the middle water column, providing a basis for reconstructing ocean acidification. The research materials for establishing a global formula include deep-sea sediment samples from the South China Sea, Western Pacific, Southeast Pacific, Northeast Atlantic, and Southwest Atlantic, all of which were collected at depths of over 300 meters to avoid terrestrial influence. Lipids were extracted using a modified Bligh-Dyer method and analyzed using high-performance liquid chromatography-atmospheric pressure chemical ionization-mass spectrometry(HPLC-APCI-MS). A positive correlation between brGDGTs indices (CBT’ and #Ringstetra)and seawater pH was established, allowing for the development of empirical formulas for reconstructing ancient midwater seawater pH. Utilizing published brGDGTs data from Holocene sediments in the northern South China Sea, the reconstructed pH values indicate a maximum of approximately 7.89 around 6.5 ka and a minimum of about 7.72 around 1.5 ka. The study validates that brGDGTs in deep-sea sediments are of marine origin. This research demonstrates that brGDGTs in marine sediments are autochthonous and can be employed to reconstruct intermediate water pH, providing significant insights into ocean acidification history.
Continue reading ‘Quantitative reconstruction of intermediate water pH in the South China Sea based on branched tetraether lipids’Calcification of planktonic foraminifer Neogloboquadrina dutertrei and its indicative significance for ocean acidification
Published 16 April 2025 Science ClosedTags: biological response, dissolution, field, morphology, paleo, protists
Planktonic foraminifera are widespread calcifying protozoa and represent a primary source of marine biogenic calcium carbonate. Elucidating the mechanisms underlying the calcification processes of planktonic foraminifera holds significant importance for understanding the marine biological pump and carbon cycling.
The present study investigated the controlling mechanisms of calcification in modern planktonic foraminifer Neogloboquadrina dutertrei by analyzing the foraminiferal shell weight data from 92 sets of surface sediments from different ocean areas, including the eastern tropical Indian, the western tropical Pacific, the eastern tropical Pacific, and the western tropical Atlantic. First, this study reveals that deep-ocean carbonate dissolution, which is related to deep-ocean carbonate ion saturation state (Δ[CO32-]), is the dominant factor influencing the shell weight of N. dutertrei in surface sediments. Then, by correcting the dissolution effect on the shell weight of N. dutertrei, we estimated the initial shell weight from which to assess secular changes in the degree of calcification of N. dutertrei. The initial shell weight results suggest that the calcification of N.dutertrei is mainly controlled by seawater carbonate system parameters such as pH, carbonate ion concentration ([CO32-]), and carbon dioxide concentration (pCO2). Calcification of N. dutertrei would decrease with ocean acidification.
Furthermore, we reconstructed initial shell weight of N.dutertrei at sites KX97322-4 and U1490 in the western tropical Pacific to evaluate the response of N. dutertrei calcification to climate changes over glacial-interglacial time scales. Calcification of N. dutertrei in the western tropical Pacific has increased during glacial periods in response to lower atmospheric pCO2 since 800 ka, confirming the dominant influence of ocean acidification on N. dutertrei calcification. We suggest that the shell weight of specific planktonic foraminiferal species may serve as a potential proxy for past seawater carbonate system reconstructions.
Continue reading ‘Calcification of planktonic foraminifer Neogloboquadrina dutertrei and its indicative significance for ocean acidification’Variations of coccolith morphology and their influencing factors in the northeastern South China Sea since the last glacial maximum
Published 15 April 2025 Science ClosedTags: biological response, chemistry, field, morphology, North Pacific, paleo, phytoplankton, sediment
Coccoliths are widely present in marine sediments of the South China Sea and closely associated with paleoenvironmental changes. This study investigates the morphological variations and driving factors of coccoliths since the Last Glacial Maximum(LGM) by analyzing the morphology and related indicators of Noelaerhabdaceae coccoliths in sediment samples from core MD18-3569 (0.01~12.41 m; 0.69~26.58 ka) in the northeastern South China Sea(22°09.30’N, 119°49.24’E at water depth 1320 m), and a total of 155 samples were collected, with a sampling resolution of approximately 167 years. Morphological attributes such as coccolith length, thickness, area, and mass were obtained through microscopic measurements and computational formulas. Coccolith morphological constants were used to evaluate preservation conditions. Based on these data, morphological divergence index and calcification index were calculated. Using the PyCO2SYS model, ocean carbonate system parameters were reconstructed to explore their impact on coccolith morphology.
The results show that coccolith length ranged from 2.69 μm to 3.86 μm(mean: 3.20 μm) since the LGM, with significant variability but no clear trend. Thickness ranged from 0.07 μm to 0.17 μm(mean: 0.13 μm) and exhibited a decreasing trend since the LGM. Coccolith mass varied between 2.31 pg and 9.02 pg(mean: 5.61 pg), also showing a decreasing trend since the LGM. Coccolith morphological constants indicate good preservation and high data reliability. Morphological divergence index results suggest a decline in coccolith size diversity, reflecting reduced seasonal variation and regional productivity. Calcification intensity metrics indicate a weakening of calcification since the LGM.
By comparing temperature, salinity, and ocean carbonate system parameters, the study identifies rising atmospheric CO2 concentrations and resultant ocean acidification as the primary factors contributing to reduced coccolith calcification. The impacts of temperature and salinity were relatively minor. These findings demonstrate the complex response of Noelaerhabdaceae coccoliths to environmental changes and highlight the significant roles of regional climate variations and carbonate system evolution in shaping coccolith morphology.
Continue reading ‘Variations of coccolith morphology and their influencing factors in the northeastern South China Sea since the last glacial maximum’Boron proxies: from calcification site pH to Cenozoic pCO2
Published 14 April 2025 Science ClosedTags: calcification, chemistry, paleo
The atmospheric partial pressure of CO2 (pCO2) is the key driver of climate variability. Boron isotopic compositions (δ11B) of marine calcium carbonates reveal pCO2 of the geologic past because boron isotope incorporation is sensitive to seawater pH, which closely reflects atmospheric pCO2. Biocarbonate δ11B values record environmental pH through a metabolic prism (so called “vital effects”), sometimes complicating interpretations. However, biocarbonate boron isotopes, coupled with boron concentrations (B/Ca), can also reveal the processes of calcification. Here, we review the link between seawater pH and the effective pH recorded by marine organisms via biomineralisation and summarise pCO2 reconstructions from boron isotopes for the Cenozoic (≈70 Ma to modern times), arguably the most significant contribution of this proxy system to date.
Continue reading ‘Boron proxies: from calcification site pH to Cenozoic pCO2 ‘Combined uranium-series and trace elements analysis in cold seep bivalves: possibility in hundred-year-scale reconstruction of deep-sea temperature and acidification
Published 17 March 2025 Science ClosedTags: chemistry, North Pacific, paleo

Despite the pivotal role of deep-sea in the global climate system, effective technology is still limited for reconstructing the key parameters of deep-sea environment such as temperature and acidification, especially at the hundred-year scale. In this study, we assessed the robustness and reliability of using bivalve shells in reconstructing cold seep environments. A significant heterogeneous distribution of trace elements was observed in the shells of clams and mussels from Formosa and Haima cold seeps even if they were collected from the same site, which was caused mainly by the environmental variables rather than physiological characters. The results of the principal component analysis revealed different trace elements ratios in the shell were associated with seepage. In particular, Sr/Ca was identified as a reliable proxy for temperature reconstruction, which performed better than oxygen isotopes. Na/Ca and U/Ca are potential proxies for cold seep acidification, but further validation is needed before their practical application. The age bias using the U-series dating method resulted from high 232Th and low initial 230Th/232Th rather than from alpha-recoil processes. The median ages assigned to mussels from the F and Haima cold seeps were 229.5 and 323.5 years, respectively. The lifespan of clams from the Haima cold seep was too short to date accurately. We proposed to conduct feasibility verification and error correction to enhance the method performance in reconstructing the hundred-year evolution of cold seep environment in the South China Sea.
Continue reading ‘Combined uranium-series and trace elements analysis in cold seep bivalves: possibility in hundred-year-scale reconstruction of deep-sea temperature and acidification’Coral skeletal isotopes (δ¹³C and δ¹¹B) as indicators of seawater light attenuation and pH chemistry in the Singapore Strait
Published 4 February 2025 Science ClosedTags: biological response, chemistry, corals, field, paleo, physiology
This study investigates the interaction between δ¹³C and δ¹¹B with terrigenous carbon dynamics in the Singapore Strait, a region characterized by distinct monsoon patterns and significant terrigenous input from surrounding peatlands. We hypothesized that elevated levels of colored dissolved organic matter (CDOM) during the Southwest Monsoon would decrease light penetration, leading to more negative δ¹³C values in coral skeletons. Additionally, we expected that remineralization of terrigenous dissolved organic matter (tDOM) would acidify seawater, resulting in more negative δ¹¹B values in corals. Analysis of Porites spp. corals from two plug cores (KUK and KUL) and seawater data from Kusu Island (2017-2020) revealed no significant correlation between CDOM and coral δ¹³C anomalies— deviations between coral skeletal δ¹³C values and the δ¹³C values of dissolved inorganic carbon (DIC) in seawater— contradicting our hypothesis. Instead, variations in coral δ¹³C appear to be related to a reservoir effect associated with negative δ¹³C in seawater DIC, influenced by tDOC remineralization. Although not statistically significant, the positive correlation pattern observed between δ¹¹B and seawater pH in the KUL core suggests that δ¹¹B might serve as a useful proxy for historical seawater pH and acidification. This finding also supports the idea that Porites corals may regulate their internal pH in response to changes in seawater acidity, potentially influenced by tDOC remineralization. Inconsistencies in the KUK core could be attributed to data offsets from our age-depth model. Further research with extended sampling is needed to confirm δ¹¹B’s sensitivity to pH changes and understand its impact on coral physiology. This study highlights the complex interplay between seasonal changes, carbon dynamics, and coral isotopic records.
Continue reading ‘Coral skeletal isotopes (δ¹³C and δ¹¹B) as indicators of seawater light attenuation and pH chemistry in the Singapore Strait’Delayed onset of ocean acidification in the Gulf of Maine
Published 23 January 2025 Science ClosedTags: biogeochemistry, chemistry, North Atlantic, paleo
The Gulf of Maine holds significant ecological and economic value for fisheries and communities in north-eastern North America. However, there is apprehension regarding its vulnerability to the effects of increasing atmospheric CO2. Substantial recent warming and the inflow of low alkalinity waters into the Gulf of Maine have raised concerns about the impact of ocean acidification on resident marine calcifiers (e.g. oysters, clams, mussels). With limited seawater pH records, the natural variability and drivers of pH in this region remain unclear. To address this, we present coastal water pH proxy records using boron isotope (δ11B) measurements in long-lived, annually banded, crustose coralline algae (1920–2018 CE). These records indicate seawater pH was low (~ 7.9) for much of the last century. Contrary to expectation, we also find that pH has increased (+ 0.2 pH units) over the past 40 years, despite concurrent rising atmospheric CO2. This increase is attributed to an increased input of high alkalinity waters derived from the Gulf Stream. This delayed onset of ocean acidification is cause for concern. Once ocean circulation-driven buffering effects reach their limit, seawater pH decline may occur swiftly. This would profoundly harm shellfisheries and the broader Gulf of Maine ecosystem.
Continue reading ‘Delayed onset of ocean acidification in the Gulf of Maine’Ocean acidification signals through deep time: a review of proxies
Published 8 January 2025 Science ClosedTags: biological response, paleo, protists, review
Highlights
- A comprehensive review of multiple ocean acidification proxies from the geologic past.
- Proxies classified by data type, time, and required facilities: observational or analytical.
- Observational: shell weight, dwarfism, carbonate size, fragmentation, preservation.
- Analytical: calcium carbonate, magnetic susceptibility, isotopes, and trace elements.
- Proxy use depends on calibration, diagenesis, timescale, and conditions it reflects.
Abstract
Anthropogenic CO₂ levels have increased by nearly 40% from preindustrial levels, with about 30% absorbed by the ocean leading to ocean acidification (OA). The associated carbonate undersaturation can critically affect marine calcifying communities. Major disruptions in the marine carbonate cycling are common throughout the Phanerozoic stratigraphic record, and often coincide with major mass extinctions and faunal turnover events. The anthropogenic OA is progressing at a rate nearly ten times faster than similar events of the past 300 million years. This makes OA research of high priority, and entails a rigorous evaluation of OA events from deep time for perspective. Such efforts are contingent upon reliable proxies. This review compiles geochemical and foraminifera-based proxies, offering a critical assessment of their fidelity, ease of use, and application scope.
This study evaluates the scope and utility of documented observational and analytical proxies based on factors like the nature of data, and the time, effort and advanced analytical facilities involved. Foraminifera-based observational proxies like morphological and community responses to OA are effective but demand taxonomic expertise. They are further complicated by vital effects, metabolic trade-offs, the influence of stressors other than ocean acidification, and paleogeographic variability in both the magnitude of stress and the organisms’ response to it. Well-calibrated analytical (geochemical) proxies offer the potential for rapid, high-resolution records across various sites. All proxies face challenges from diagenetic alterations, which can affect their reliability. However, this review offers the pros/cons and practical recommendations for proxy utility, emphasing the need for a multi-proxy approach to enhance accuracy and cross-verification. Future research must urgently address plankton community responses, OA-tolerant taxa, and localized calcification environments to grasp the full impact of acidification. It is critical to refine lesser-known proxies (e.g., S/Ca) and to rapidly expand datasets on carbonate system parameters across Phanerozoic OA events to advance our understanding and mitigation strategies.
Continue reading ‘Ocean acidification signals through deep time: a review of proxies’

