Posts Tagged 'regionalmodeling'



Remote estimations of total alkalinity and total dissolved inorganic carbon in the Yellow and East China Seas using machine learning approach

The sea surface total alkalinity (AT) and total dissolved inorganic carbon (CT) are two essential carbonate variables to understand the marine carbon cycle, yet it has been a big challenge to retrieve AT and CT from space for the Yellow and East China Seas (YECS) owing to they are affected coupling by physical and biogeochemical processes and the heterogeneous coastal environments. To address these challenges, we developed multilayer perceptron neural network (MPNN)‐based AT and CT models with the field measured environmental variables as the model predictors, and obtained a root mean square difference (RMSD) of 27.05 μmol/kg and coefficient of determination (R²) of 0.91 for AT (N = 1,520) and a RMSD was 28.31 μmol/kg and R² was 0.88 for CT (N = 513). Further, the MPNN‐based model showed much promise in remotely retrieving surface AT and CT with the spatial resolution of ∼1 km in the YECS with a RMSD of 26.59 μmol/kg, R² of 0.76 for AT and a RMSD of 37.14 μmol/kg, R² of 0.79 for CT. Applying the MPNN‐based model to the Moderate Resolution Imaging Spectroradiometer (MODIS) products, retrieved the monthly distributions of AT and CT over the past 20 years for the first time, demonstrated strong linkages to water masses circulations, upwelling and biological processes with seasonal cycles. Also, the interannual variations of AT and CT had significant relationships with the environmental proxies, as well as climate indices (North Pacific Gyre Oscillation). This work advances understanding of coastal carbon cycling and offers a valuable tool for large‐scale, high spatial‐temporal resolution monitoring of carbon dynamics.

Plain Language Summary

Understanding the coastal carbon cycle is critical for addressing climate change, but continuously measuring key carbonate variables total alkalinity (AT) and total dissolved inorganic carbon (CT) in dynamic coastal regions like the Yellow and East China Seas (YECS) has been challenging. To overcome this challenge, we developed a machine learning based AT and CT models based on extensive field data set with uncertainties of 27.05 μmol/kg for AT and 28.31 μmol/kg for CT, demonstrated that the environmental variables, such as sea surface temperature, salinity and chlorophyll a allow for retrieving AT and CT. Further validation showed that the model has much promise in retrieving surface AT and CT from space. Applying the model to satellite products, this work provides the monthly distributions and interannual dynamics of AT and CT in the YECS over the past 20 years for the first time. We found the physical and biogeochemical processes shape the monthly distribution of AT and CT in the YECS, and its interannual variations are strongly correlated with environmental proxies, as well as climate forcings. The integration of satellite-derived products and machine learning based approach enables cost-effective, high-resolution monitoring of coastal carbonate system dynamics.

Key Points

  • A machine learning-based model was developed to retrieve the surface carbonate variables from space for the Yellow and East China Seas
  • The multilayer perceptron neural network-based model has high tolerance to these uncertainties in satellite-derived environmental proxies
  • The interannual and seasonal variations of carbonate variables are affected by coupling physical and biogeochemical processes
Continue reading ‘Remote estimations of total alkalinity and total dissolved inorganic carbon in the Yellow and East China Seas using machine learning approach’

pH acidification in the Red Sea: a machine learning-based validation study

Highlights

  • Predicting ocean acidification in the Red Sea using advanced machine learning models, providing critical insights for regional marine ecosystem management.
  • Models yielded more efficient and effective results compared to traditional methods
  • Artificial intelligence-based models offer a potential solution for the management of sustainable ecosystems with a focus on environmental sustainability
  • Artificial intelligence-based applications offer significant potential for integration within remote monitoring systems

Abstract

This study presents application and performance comparison of various machine learning (ML) techniques to analyze pH variations in the Red Sea between the years 2021 and 2024, utilizing satellite remote sensing from the Copernicus Programme. The accuracy of the model is enhanced by employing data preprocessing. The performance of a number of machine learning models (Stepwise Linear Regression, Gaussian Process Regression, Linear Regression, Support Vector Machines and Neural Networks) are assessed. The results shown that the highest predictive accuracy is achieved by Stepwise Linear Regression and Linear Regression models. These models found to be superior in predicting pH changes due to seasonal phytoplankton blooms, vertical mixing of waters, and CO₂ infusion from the atmosphere accurately. Therefore, this research proposes a comprehensive approach for evaluating long-term changes in pH levels using robust data, improving strategic environmental governance in marine ecosystems. ML-based algorithms offer more integrated, cost-effective, and scalable solutions for monitoring ocean acidification, outperforming traditional approaches in both efficiency and adaptability.

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Impact of water mass dynamical and property variability on the inflow of a semi-enclosed sea

The biogeochemistry of the Salish Sea is strongly connected to its Pacific Ocean inflow through Juan de Fuca Strait (JdF), which varies seasonally and interannually in both volume and property flux. Long-term trends in warming, acidification, and deoxygenation are a concern in the region, and inflow variability influences the flux of tracers potentially contributing to these threats in the Salish Sea. Using ten years (2014-2023, inclusive) of Lagrangian particle tracking from JdF, we quantified the contributions of distinct Pacific water masses to interannual variability in JdF inflow and its biogeochemical properties. We decompose variability in salinity, temperature, dissolved oxygen, nitrate, and carbonate system tracers into components arising from changes in water mass transport (dynamical variability) and changes in source properties (property variability). Observations in the region provide insight into water mass processes not resolved by the model, including denitrification and trace metal supply. Deep water masses dominate total inflow volume and drive variability in nitrate flux through changes in transport. Shallow water masses, particularly south shelf water, exhibit greater interannual variability and disproportionately affect temperature, oxygen, and [TA–DIC], driving change through both dynamical and property variability. This study highlights the combined roles of circulation and source water properties in shaping biogeochemical variability in a semi-enclosed sea, and how these roles differ between biogeochemical tracers. It provides a framework for attributing flux changes to specific source waters and physical and biogeochemical drivers, with implications for forecasting coastal ocean change under future climate scenarios.

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Improving coastal ocean pH estimates through assimilation of glider observations and hybrid statistical methods

Ocean acidification monitoring and carbon accounting require accurate estimates of marine carbonate system variables, particularly in dynamic coastal regions where observations remain sparse. This study presents an approach to improving carbonate system state estimates in the California Current System through the assimilation of underwater glider observations with both dynamical and statistical models. We implement a 4D-Var data assimilation system that jointly assimilates physical variables, chlorophyll, and glider-based pH and alkalinity data into a regional coupled physical-biogeochemical model. Our results demonstrate that joint assimilation of carbonate system variables successfully improves pH and alkalinity estimates while maintaining the quality of physical and chlorophyll estimates. Cross-validation experiments reveal that pH data assimilation typically improves estimates near the observation network, although downstream advection of increments can occasionally degrade results. We also show that hybrid estimates that combine the output of the dynamical, physical ocean model with a statistical model produce accurate carbonate system estimates without requiring a biogeochemical model. This finding suggests that physical ocean models and data assimilation systems can obtain reasonable carbonate system estimates by combining statistical methods with model estimates of temperature and salinity.

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Amplified bottom water acidification rates on the Bering Sea shelf from 1970–2022

The Bering Sea shelf supports a highly productive marine ecosystem that is vulnerable to ocean acidification (OA) due to the cold, carbon-rich waters. Previous observational evidence suggests that bottom waters on the shelf are already seasonally undersaturated with respect to aragonite (i.e. Ωarag<1) and that OA will continue to increase the spatial extent, duration, and intensity of these conditions. Here, we use a regional ocean biogeochemical model to simulate changes in ocean carbon chemistry for the Bering Sea shelf from 1970–2022. Over this timeframe, model results suggest that surface Ωarag decreases by −0.043 per decade and surface pH by −0.014 per decade, comparable to observed global rates of OA. However, bottom water pH decreases at twice the rate of surface pH, while bottom [H+] decreases at nearly 3 times the rate of surface [H+]. This amplified bottom water acidification has emerged over the past 25 years and is likely driven by a combination of anthropogenic carbon accumulation and increasing primary productivity and subsurface respiration and remineralization. Due to this enhanced bottom water acidification, the spatial extent of bottom waters with Ωarag<1 has greatly expanded over the past 2 decades, along with pH conditions harmful to red king crab. Interannual variability in surface and bottom Ωarag, pH, and [H+] has also increased over the past 2 decades, resulting in part from the increased physical climate variability. We also find that the Bering Sea shelf is a net annual carbon sink of 1.1–7.9 Tg C yr−1, with the range resulting from the difference in the two different atmospheric forcing reanalysis products used. Seasonally, the shelf is a significant carbon sink from April–October but a somewhat weaker carbon source from November–March.

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Understanding historical and projected compound change on the Northwest Atlantic shelf

Increasing atmospheric carbon dioxide concentrations are accompanied by ocean acidification, oxygen loss, and warming of the global ocean. However, in coastal environments, local processes that occur on small spatial scales can moderate or exacerbate these trends. These processes are not well represented in global climate models. Therefore, downscaled tools are useful to decipher carbonate system drivers and predict conditions. Here we describe the application of a ROMS based regional model of the northwest Atlantic shelf, stretching from Florida to Newfoundland, with ~7 km horizontal resolution. The biogeochemical model relies on the Carbon, Ocean Biogeochemistry and Lower Trophics (COBALT) model in combination with regional empirical models to reconstruct the carbon variables. Using a 30-year historical simulation, model results are evaluated against in situ observations and then used to estimate anthropogenic carbon inventories for the region. Historical trends differ between surface and bottom conditions with bottom trends identified as more severe. Circulation and changes in the water column metabolism amplify local rates of change historically, while warming and water mass changes act to dampen these changes. Regional locations of accelerated carbon storage and accumulation are identified and described to be modified by coastal processes. A time-varying dynamic delta forced future projection out to 2098 under SSP5-8.5 projects how these trends will continue and indicates future acceleration of trends. Observing compound change, or multiple stressors changing in concert or closely, requires not only over-constraint on the carbon cycle parameters, but also multiple co-existing biogeochemical observations to refine the mechanisms responsible for local climate variability.

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Mechanisms of ocean acidification in Massachusetts Bay: insights from modeling and observations

Massachusetts Bay in the northeastern United States is highly vulnerable to ocean acidification (OA) due to reduced buffering capacity from significant freshwater inputs. We hypothesize that acidification varies across temporal and spatial scales, with short-term variability driven by seasonal biological respiration, precipitation–evaporation balance, and river discharge, and long-term changes linked to global warming and river flux shifts. These patterns arise from complex nonlinear interactions between physical and biogeochemical processes. To investigate OA variability, we applied the Northeast Biogeochemistry and Ecosystem Model (NeBEM), a fully coupled three-dimensional physical–biogeochemical system, to Massachusetts Bay and Boston Harbor. Numerical simulation was performed for 2016. Assimilating satellite-derived sea surface temperature and sea surface height improved NeBEM’s ability to reproduce observed seasonal and spatial variability in stratification, mixing, and circulation. The model accurately simulated seasonal changes in nutrients, chlorophyll-a, dissolved oxygen, and pH. The model results suggest that nearshore areas were consistently more susceptible to OA, especially during winter and spring. Mechanistic analysis revealed contrasting processes between shallow inner and deeper outer bay waters. In the inner bay, partial pressure of pCO2 (pCO2) and aragonite saturation (Ωa) were influenced by sea temperature, dissolved inorganic carbon (DIC), and total alkalinity (TA). TA variability was driven by nitrification and denitrification, while DIC was shaped by advection and net community production (NCP). In the outer bay, pCO2 was controlled by temperature and DIC, and Ωa was primarily determined by DIC variability. TA changes were linked to NCP and nitrification–denitrification, with DIC also influenced by air–sea gas exchange.

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Detangling the elevated sea-surface pCO2 trend in a river-dominated continental shelf using a high-resolution regional ocean model

River-dominated continental shelves significantly influence coastal carbon cycling and ocean acidification due to substantial freshwater river discharge. Despite this importance, the contributions of riverine dissolved inorganic carbon (DIC), total alkalinity (TA), and nutrient loads to surface pCO2 trends remain inadequately quantified. This study employs the Regional Ocean Modelling System (ROMS) to evaluate the effects of riverine DIC, TA, and nutrient fluxes on surface pCO2 trends in the northern Gulf of Mexico/America from 2001 to 2019. A control simulation (CTR) representing historical river inputs was compared to three scenarios: no historical riverine DIC and TA flux (NRC), no historical nutrient flux (NRN), and high freshwater discharge (60% of historical levels, HRD60). Results indicated positive pCO2 trends in most nGoM regions, except for HRD60, which exhibited some negative trends. First-order Taylor series decomposition revealed that DIC is the primary contributor to increasing pCO2 trends, accounting for 50%, while TA offsets this by 31%. Sea surface temperature (SST) contributes 13%, and sea surface salinity (SSS) contributes 6%. Under the HRD60 simulation, increased freshwater discharge enhances both DIC and TA delivery, leading to spatially heterogeneous yet dampened pCO2 trends due to stronger buffering. These findings emphasize that coastal pCO2 trajectories depend on the magnitude and composition of riverine fluxes. Carbonate supplies account for 59% of total river-driven modulation of surface pCO2, with biological uptake offsetting the remaining 41%. Future climate projections must consider these nonlinear interactions to effectively assess acidification risks in river-influenced coastal regions.

Continue reading ‘Detangling the elevated sea-surface pCO2 trend in a river-dominated continental shelf using a high-resolution regional ocean model’

Biogeochemical effects of Golden Gate Strait exchange and other land-base inputs to the San Francisco and Monterey Bay coasts

The central California coast between San Francisco Bay (SFB) and Monterey Bay (MB) is an upwelling-dominated marine ecosystem with a coastal population of 8.5 million. Anthropogenically enhanced terrestrial nutrients enter the ocean via three primary pathways: (1) SFB exchanges across the Golden Gate Strait, (2) coastal rivers, and (3) municipal wastewater discharged to ocean outfalls. The consequences of these inputs on primary production, acidification and hypoxia remain poorly understood. Here, we investigate these effects with a submesoscale-resolving ocean biogeochemical model. Simulations show that while terrestrial nutrient inputs collectively affect a broad region, the stronger impacts are found in nearshore waters, increasing dissolved inorganic nitrogen by 11.4%, primary production by 6.5%, and chlorophyll concentration by 4.5% along a 15-km coastal band. While exchanges from the SFB dominate these effects, all sources, including coastal rivers and ocean outfalls, produce distinct, localized footprints. Subsurface oxygen and pH decline due to terrestrial nutrient loading, but vigorous upwelling and circulation limit the intensity of these changes. Enhanced nutrient inputs are predicted to promote conditions favorable for diatom growth, potentially including Pseudo-nitzschia spp., creating an environment more conducive to domoic acid (DA) production. Model results show that chlorophyll concentrations exceed the threshold associated with elevated DA risk on 10-45% more days under nutrient-enriched conditions, compared to a scenario without terrestrial inputs. These findings highlight the need for expanded observational and modeling efforts to better understand the ecological consequences of anthropogenic nutrient inputs along the central California coast.

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New observations confirm the progressive acidification in the Mozambique Channel

New observations obtained in 2021 and 2022 are presented and used to investigate the trend of the carbonate system (including pH and aragonite saturation state, Ωar) in the southern sector of the Mozambique Channel. Using historical and new data in April–May we observed an acceleration of the acidification ranging from -0.012 TS.decade-1 in 1963–1995 to -0.027 (±0.003) TS.decade-1 in 1995–2022. Result from a neural network (FFNN) model for all seasons also suggests faster pH trend in recent decades, -0.011 TS.decade-1 over 1985–1995 and -0.018 TS.decade-1 over 1995–2022. In May 2022 we estimated Ωar of 3.49, about 0.3 lower than observed in May 1963 (Ωar = 3.86). The lowest Ωar value of 3.23 was evaluated from the FFNN model in September 2023 that corresponds to the hypothetical critical threshold value (3.25) for coral reefs. In 2025 a marine heat wave was observed in this region (sea surface temperature up to 30 °C) and data from a BGC-Argo float indicate that sea surface pH was low in January 2025 (pH = 7.95) whereas War was low in Mach 2025 (Ωar = 3.2). A projection of the CT concentrations based on observed anthropogenic CO2 in subsurface water and emissions scenario, suggests that a risky level for corals (Ωar < 3) could be reached as soon as year 2034.

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Future biogeochemical changes in southern South China Sea from CMIP6 model projection

The ongoing climate change has significant impacts on global ocean biogeochemistry. This study employs Coupled Model Intercomparison Project Phase 6 Earth System Models under Shared Socioeconomic Pathways (SSPs) scenarios SSP2-4.5, SSP3-7.0, and SSP5-8.5 to investigate the future projection of biogeochemical changes in the southern South China Sea (SCS) from 2015 to 2100. The focus is on projected changes in Sea Surface Temperature (SST) and seven important biogeochemical variables, including Chlorophyll, Phytoplankton, integrated Primary Production, Oxygen, Nitrate, Phosphate, and pH. The results consistently indicate significant warming of 1 to 3 °C at the end of 21st century across all scenarios in southern SCS region, potentially leading to cascading consequences for marine ecosystems and fisheries. The projected increases in SST induce declines in dissolved Oxygen levels about − 3 to -8 mmol m-3 and ocean acidification about − 0.1 to -0.4 units, posing a multifaceted threat to this crucial fishing ground. This intensified warming is driven by the weakening of surface wind speeds and the strengthening of upper-ocean stratification, which simultaneously contribute to reductions in nutrient availability and productivity in the southern SCS. This projection assessment provides valuable insights into the anticipated biogeochemical shifts in the southern SCS under various climate scenarios, offering a vital foundation for understanding the adverse effects of climate change on the southern SCS ecosystems and ensuring its long-term sustainability.

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Unprecedented acidification ahead for corals in Hawaiʻi waters

Across the globe, oceans are acidifying as they absorb carbon dioxide from the atmosphere, threatening coral reefs and many other marine organisms. A new study, led by oceanographers at the University of Hawaiʻi at Mānoa, revealed that unprecedented levels of ocean acidification are expected around the main Hawaiian Islands within the next three decades.

Increased ocean acidification has the potential to harm marine life by weakening the shells and skeletons of organisms such as corals and clams, amplifying the effects of existing stressors, and threatening ocean-based ecosystems. However, researchers have hope, as some organisms have shown signs of adapting to the changing waters. The study helps researchers, conservationists and policymakers understand the future challenges facing Hawaiʻi’s coral reefs and provides information for preserving these critical ecosystems for future generations.

Researchers within the laboratory group of Brian Powell, professor in the Department of Oceanography at the UH Mānoa School of Ocean and Earth Science and Technology (SOEST), used advanced, fine-scale computer models to project how ocean chemistry around the main Hawaiian Islands might change over the 21st century under different climate scenarios based on how much carbon dioxide societies continue to emit.

“We found that ocean acidification is projected to increase significantly in the surface waters around the main Hawaiian Islands, even if carbon emissions flatline by mid-century in the low emission scenario,” said Lucia Hošeková, lead author of the paper and research scientist in SOEST. “In all nearshore areas these increases will be unprecedented compared to what reef organisms have experienced in many thousands of years.”

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Temporal trends of ocean acidification in the Gulf of Guinea and the potential impact on socio economic development

Ocean acidification, primarily driven by increased atmospheric CO₂, poses significant environmental and socioeconomic threats, particularly in vulnerable regions like the Gulf of Guinea. This study analyses historical pH trends, spatial variations, and projected acidification scenarios using data from CMIP6 models and NOAA observational records, focusing on the Gulf of Guinea’s unique ecological and economic challenges. Findings indicate a steady decline in pH from 8.20 to 8.08 between 1750 and 2010, with pronounced deviations linked to industrial activities and rising atmospheric CO₂ concentrations. Seasonal fluctuations and upwelling events exacerbate acidification in this high-productivity region, intensifying the vulnerability of marine biodiversity and fisheries. Projections for 2050–2100 under SSP2 4.5 and SSP5-8.5 scenarios reveal further pH declines, with potential hotspots emerging in coastal areas. These changes threaten critical ecosystems, such as shellfish habitats, and threaten food security and economic stability for communities dependent on marine resources. The study underscores the necessity of regional monitoring programs, international collaboration, and mitigation strategies, including carbon emission reductions, ecosystem-based adaptation, and sustainable aquaculture practices. This research highlights the Gulf of Guinea’s heightened sensitivity to acidification due to its unique biogeochemical processes and socioeconomic dependencies. It advocates for integrating science, policy, and local initiatives to address these challenges. Targeted interventions, such as mangrove restoration and regional partnerships, can strengthen resilience and provide valuable insights for global ocean acidification management efforts.

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Spatiotemporal analysis of sea-surface pH in the Pacific Ocean based on interpretable machine learning

Increasingly severe ocean acidification (OA) disrupts the balance of marine ecosystems. Seawater pH is a key indicator of OA but remains challenging to characterize due to sparse and limited in situ observations. In this study, we propose a spatiotemporal inversion method for surface pH based on interpretable machine learning. By applying carbonate system calculations, we construct an expanded pH observational dataset and obtain spatiotemporal distributions of pH and its influencing factors across the Pacific Ocean from 2003 to 2021. The interpretability analysis reveals that physical, biological, and optical factors contribute 53.9%, 23.9%, and 22.2%, respectively, to pH variability. Sea-surface temperature is the dominant driver, contributing 15.9% of all factors by regulating CO2 solubility and biological activity. Particulate inorganic carbon (PIC) and particulate organic carbon (POC) show relative contributions of 12.6% and 9.4%, respectively, quantitatively reflecting the important roles of biogenic calcification and the biological carbon pump. Furthermore, the analysis focusing on the Niño 3.4 region reveals a potential pathway through which the ENSO disturbances may affect pH by influencing PIC and POC. Therefore, this study provides a data-driven approach to gain deeper insights into the spatiotemporal patterns of pH and its influencing factors.

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Patterns of ocean acidification emergence in the Hawaiian Islands using dynamically downscaled projections

Abstract

This study presents the first dynamically downscaled projections of ocean acidification (OA) for the Main Hawaiian Islands using coupled Regional Ocean Modeling System and Carbon, Ocean Biogeochemistry, and Lower Trophics models integrated with Coupled Model Intercomparison Project Phase 6 (CMIP6) outputs from the Community Earth System Model 2. We analyze three Shared Socioeconomic Pathways (SSP1-2.6, SSP2-4.5, and SSP3-7.0) and introduce a climate novelty metric to assess the extent to which future OA conditions exceed historical variability by comparing the magnitude of projected changes to past variability. Our results indicate unprecedented levels of OA within the next three decades across all scenarios, with aragonite saturation state (ΩA), pH, and substrate-to-inhibitor ratio (bicarbonate to free hydrogen ions [HCO3−]/[H+]) projected to decline significantly. By 2100, under SSP3-7.0, ΩA novelty could exceed reference variability by a factor of 12. Spatial analysis reveals heterogeneous OA impacts, with windward coastlines consistently exhibiting higher novelty levels. Importantly, we find contrasting spatial patterns of OA indices due to varying sensitivities to temperature and dissolved inorganic carbon, resulting in higher ΩA novelty in northern areas and higher pH and substrate-to-inhibitor ratio novelty in southern regions.

Key Points

  • Three climate scenarios (SSP1-2.6, SSP2-4.5, and SSP3-7.0) show distinct implications for ocean acidification in the main Hawaiian Islands
  • Aragonite saturation, pH, and substrate (bicarbonate) to inhibitor (free hydrogen) ratio lead to distinct spatial patterns
  • Future conditions under SSP3-7.0 are projected to exceed historical variability with strong spatial differences along Hawaiian coasts

Plain Language Summary

Our oceans are acidifying as they absorb carbon dioxide from the atmosphere. This change threatens coral reefs, which are vital ecosystems supporting marine life and providing coastal protection. In this study, we used advanced computer models to project how ocean chemistry around the main Hawaiian Islands might change over the 21st century under different scenarios based on how much carbon dioxide we continue to emit. Our results show that ocean acidification is expected to increase significantly across all scenarios, but the extent and timing of these changes vary. In the high-emission scenario, ocean chemistry will become dramatically different from what we have seen historically, potentially posing challenges to coral reefs and their ability to adapt. Even in the low-emission scenario, some changes are inevitable, but they are less extreme and occur more gradually. We introduced a concept called “novelty” to measure how future ocean conditions might deviate from what coral reefs have experienced in recent history, and discovered that different parts of the Hawaiian Islands may experience acidification differently. This research helps us understand the future challenges facing Hawaiian coral reefs and provides information for researchers, conservationists and policymakers for preserving these critical ecosystems for future generations.

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The coupled oxygen and carbon dynamics in the subsurface waters of the Gulf and Lower St. Lawrence Estuary and implications for artificial oxygenation

The Gulf and Lower St. Lawrence Estuary have experienced major environmental change over the past century, including the development of hypoxic bottom waters and their simultaneous warming and acidification. Here, we use biogeochemical observations collected during the 2021–2023 TReX project as well as historical data, combined with a tracer-calibrated 1D Advection-Diffusion model with variable boundary conditions to represent dissolved oxygen (DO) and dissolved inorganic carbon (DIC) dynamics within the core of the oxygen minimum zone (27.15–27.3 kg m-3 isopycnals) of the Laurentian Channel. The rate of in-channel oxygen utilization in the deep layer was nearly invariant from 2003 to 2023 at 21.1 ± 2.5 µmol kg-1 yr-1 and the DIC accumulation rate was estimated to be 18.3 ± 2.5 μmol kg-1 yr-1. Using δ13CDIC data, we assess the effect of microbial organic matter remineralization processes and dilution of the 13CDIC pool (−6.6×10-3 ‰ per μmol of added metabolic DIC). These data and the use of a tracer-calibrated model to resolve advection and mixing dynamics reconcile differences in prior estimates of biogeochemical transformation rates. Finally, we apply the model to the mitigation scenario proposed by Wallace et al. (2023) for artificial re-oxygenation of the Laurentian Channel bottom waters using pure oxygen. We estimate that the injection of ~8.3 × 105 tonnes yr-1 of oxygen, equivalent to an additional 55 μmol kg-1 relative to the 2023 boundary concentration proximal to the Cabot Strait, would be required to achieve and maintain above hypoxic levels (>62.5 μmol kg-1) at the head of the Laurentian Channel. Using the model, we estimate the time required to re-establish steady-state along-channel distributions of DO and DIC following a change in offshore boundary conditions to be about 10 years, or twice the along-channel transit time.

Continue reading ‘The coupled oxygen and carbon dynamics in the subsurface waters of the Gulf and Lower St. Lawrence Estuary and implications for artificial oxygenation’

Data-driven modeling of 4D ocean and coastal acidification in the Massachusetts and Cape Cod Bays from surface measurements

Abstract

A significant portion of atmospheric  emissions is absorbed by the ocean, resulting in acidified seawater and altered carbonate composition that is harmful to marine life. Despite detrimental effects, assessing ocean and coastal acidification (OCA) is difficult due to the scarcity of in situ measurements and the high costs of computational modeling. We develop a parsimonious data-driven framework to model indicators of OCA and test it in the Massachusetts Bay and Stellwagen Bank, a region with fishing and tourism industries affected by OCA. First, we trained a neural network to predict in-depth fields for temperature and salinity  using surface quantities from satellites and in situ measurements . The relationship between 2D surface and 3D properties is captured through the in-depth modes and coefficients obtained from principal component analysis applied to a high-resolution historical reanalysis data set. Next, we used Bayesian regression methods to estimate region-specific relationships for in-depth total alkalinity (TA), dissolved inorganic carbon (DIC), and aragonite saturation state  as functions of temperature, salinity, and chlorophyll. Lastly, 4D daily field predictions are generated from surface measurements with a spatial resolution of 4 km horizontally and 45 sigma levels vertically. The model’s performance is evaluated using withheld measurements across depths, locations, and seasons with RMSEs of 1.59°C, 0.31 PSU, 37.54 mol, 39.40 mol, and 0.42 for temperature, salinity, TA, DIC, and , respectively, at one withheld location. The framework is useful for understanding OCA and includes uncertainty quantification for future planning and optimal sensor placement.

Plain Language Summary

About a quarter of carbon dioxide emissions in the atmosphere is absorbed by the oceans. When this carbon dioxide dissolves in seawater, it results in ocean acidification (OA). A useful indicator of OA is the saturation state of aragonite, a type of calcium carbonate used by organisms that form shells. However, understanding the effects of OA is difficult due to the lack of observations and the high cost and complexity of modeling. We present a data-driven approach to model carbonate chemistry using readily available observations from satellites and low-cost sensors. Given surface measurements of temperature, salinity, and chlorophyll, our machine learning model produces temperature, salinity, total alkalinity, dissolved inorganic carbon, and aragonite saturation state covering spatial (latitude, longitude, and depth) and temporal domains for these variables. Compared to withheld observations, our model achieved reasonable accuracy across many seasons and depths, a level of resolution not matched by other models for the same set of inputs. Our model is useful for monitoring, decision-making, and future planning.

Key Points

  • We present a data-driven approach to rapidly model 4D carbonate chemistry fields given readily available surface observations
  • By using training data from both physics simulations and field observations, the model achieves very high resolution with minimal inputs
  • The step-by-step method can be reproduced in other regions or for new data, and includes uncertainty quantification for decision-making
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Dissolved inorganic carbon entrainment into the mixed layer of the western subarctic North Pacific: a key process of ocean acidification under historical carbon dioxide emissions

This study investigated processes responsible for the acidification of the mixed layer water at station K2 (N, E) in the western subarctic North Pacific by analyzing physical and biogeochemical variables during 1850–2014 in a Geophysical Fluid Dynamics Laboratory Earth system model of Coupled Model Intercomparison Project Phase 6 under historical carbon dioxide () emissions. Analysis revealed an accelerated pH decline at a rate of −0.0015 , which began around 1960. An increase in dissolved inorganic carbon (DIC) is found to be the principal factor of the pH decline. DIC budget analysis of the mixed layer identified the primary physical process accelerating the DIC increase during 1960–2014: enhanced vertical entrainment of the DIC-rich deep water into the mixed layer during autumn–winter (rate of 3.1 μ). This enhancement is attributed to the equatorial Pacific frequent high sea surface temperature condition due to global warming and El Niño events through the model’s atmospheric teleconnection.  gas exchange at the sea surface contributes secondarily to the DIC increase (0.16 μ). Meanwhile, horizontal advection (−0.6 μ) and biological consumption (−2.6 μ) partially counteract DIC input. These physical and biological processes collectively resulted in a simulated DIC increase of 0.043 μ (i.e., 0.52 μ), consistent with the observed increase rate.

Continue reading ‘Dissolved inorganic carbon entrainment into the mixed layer of the western subarctic North Pacific: a key process of ocean acidification under historical carbon dioxide emissions’

Novel sequential modeling framework improves phytoplankton biomass predictions in response to multiple environmental stressors

Understanding the impacts of multiple environmental stressors on phytoplankton biomass is crucial for predicting marine ecosystem responses under global climate change. This study employed a sequential modeling framework integrating principal component analysis, generalized additive models, and artificial neural networks to improve predictions of phytoplankton chlorophyll a concentrations in the Taiwan Strait. Analyzing a decadal dataset, we found that a 2C rise in sea surface temperature and a 0.2 pH decline will each lead to an 11.3% reduction in chlorophyll a biomass, whereas nitrogen enrichment is expected to increase it by only 2.8%. The combined effects of these stressors will result in an 18.3% reduction, with the most significant declines occurring in high-chlorophyll areas during algal blooms. Compared to simpler models, our approach improved accuracy by reducing overestimation biases, particularly under acidification scenarios, highlighting the need for advanced, multivariate models in forecasting phytoplankton dynamics under global changes.

Scientific Significance Statement

Phytoplankton are critical to marine ecosystems and global biogeochemical cycles, yet predicting their responses to the combined stressors of warming, acidification, and eutrophication remains a major challenge. Traditional models struggle with multicollinearity and nonlinear interactions among environmental variables. This study introduces an innovative sequential modeling framework that integrates principal component analysis, generalized additive models, and artificial neural networks, addressing these challenges by combining the strengths of each method in a series. This approach not only improves predictive accuracy, particularly during algal blooms, but also reveals that combined stressors lead to an 18.3% decline in phytoplankton biomass, underscoring their vulnerability under future climate scenarios. By bridging methodological advancements with ecological discovery, this work provides a powerful tool for understanding and forecasting marine ecosystem responses to global change.

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Antarctic krill habitat suitability changes: historical trends and future projections under climate scenarios

Highlights

  • Sea temperature and pH are key environmental factors affecting krill habitats.
  • Krill habitat suitability shows spatiotemporal heterogeneity across regions.
  • Under low emission scenario, krill habitat suitability will recover by 2100.
  • Under high emission scenario, highly suitable habitat may be lost by 2100.

Abstract

Antarctic krill plays a crucial role in the Southern Ocean ecosystem. However, data limitations leave a significant gap in understanding the changes in krill habitat suitability. This study integrated data from Chinese Antarctic research expeditions and KRILLBASE database, using Maxent model to assess spatiotemporal shifts in krill suitable habitat from 1991 to 2100 across the eastern and western Antarctic under SSP-RCP scenarios. The results reveal regional differences in climate and environmental impacts on krill habitats. Sea temperature and pH are dominant environmental factors affecting habitat suitability. With climate changes, the suitable habitats are shifting toward higher latitudes, and the latitudinal shift of habitats in CCAMLR Areas 48 and 58 is in the opposite direction. Under high-emission scenarios, krill habitats face severe contraction and loss, whereas low-emission scenarios suggest partial recovery by 2100. Coordinated global action to protect krill habitats is essential to address the biodiversity crisis in the Southern Ocean.

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